Mercurial > repos > bgruening > confab
view tool_dependencies.xml @ 3:039ef13e3676 draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/chemicaltoolbox/confab commit a44c0a13283e873a740eabcad04f021208290dfe-dirty
author | bgruening |
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date | Sun, 01 Nov 2015 10:34:34 -0500 |
parents | 548537fc2577 |
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<?xml version="1.0"?> <tool_dependency> <package name="eigen2" version="2.0.17"> <repository changeset_revision="a270fba04f3a" name="package_eigen_2_0" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> </package> <package name="confab" version="1.0.1"> <install version="1.0"> <actions> <action type="download_by_url">https://github.com/bgruening/confab/archive/1.0.1.tar.gz</action> <!-- populate the environment variables from the dependend repos --> <action type="set_environment_for_install"> <repository changeset_revision="a270fba04f3a" name="package_eigen_2_0" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> <package name="eigen2" version="2.0.17" /> </repository> </action> <action type="shell_command">cmake . -DCMAKE_INSTALL_PREFIX=$INSTALL_DIR -DEIGEN2_INCLUDE_DIR=$EIGEN2_SOURCE_PATH</action> <action type="shell_command">make</action> <action type="shell_command">make install</action> <action type="set_environment"> <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> <environment_variable action="set_to" name="BABEL_DATADIR">$INSTALL_DIR/share/openbabel</environment_variable> <environment_variable action="set_to" name="BABEL_LIBDIR">$INSTALL_DIR/lib/openbabel/2.2.99</environment_variable> </action> </actions> </install> <readme>Compiling Confab requires g++, CMake 2.4+. Optional but required for a few features is libxml2 and zlib.</readme> </package> </tool_dependency>