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1 <?xml version="1.0"?>
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2 <data_managers>
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3 <data_manager tool_file="data_manager/data_manager_diamond_database_builder.xml" id="diamond_database_builder" version="0.0.1">
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4 <data_table name="diamond_database">
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5 <output>
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6 <column name="value" />
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7 <column name="name" />
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8 <column name="db_path" output_ref="out_file" >
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9 <move type="directory" relativize_symlinks="True">
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10 <!-- <source>${db_path}</source>--> <!-- out_file.extra_files_path is used as base by default --> <!-- if no source, eg for type=directory, then refers to base -->
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11 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">diamond_database/${value}</target>
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12 </move>
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13 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/diamond_database/${value}/${db_path}</value_translation>
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14 <value_translation type="function">abspath</value_translation>
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15 </column>
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16 </output>
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17 </data_table>
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18 </data_manager>
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19 </data_managers>
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