Mercurial > repos > bgruening > gfastats

diff test-data/test_07_stats.tabular @ 1:2b8b4cacb83d draft

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"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/gfastats commit 8a11d204376d9daea8026f1b33a53f40fc693bf2"
author bgruening
date Mon, 25 Apr 2022 09:38:18 +0000
parents 5799092ffdff
children 8ccbf07a5433
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--- a/test-data/test_07_stats.tabular	Wed Mar 09 10:29:20 2022 +0000
+++ b/test-data/test_07_stats.tabular	Mon Apr 25 09:38:18 2022 +0000
@@ -6,23 +6,26 @@
 Scaffold auN: 415520.91
 Scaffold L50: 1
 Largest scaffold: 417540
-# contigs: 6
 Total contig length: 419573
 Average contig length: 69928.83
 Contig N50: 416949
 Contig auN: 414345.81
 Contig L50: 1
 Largest contig: 416949
-# gaps: 3
-Total gap length: 3
-Average gap length: 1.00
-Gap N50: 1
-Gap auN: 1.00
-Gap L50: 2
-Largest gap: 1
-Base composition (ACGT): 102144, 112550, 104859, 100020
+# gaps in scaffolds: 3
+Total gap length in scaffolds: 3
+Average gap length in scaffolds: 1.00
+Gap N50 in scaffolds: 1
+Gap auN in scaffolds: 1.00
+Gap L50 in scaffolds: 2
+Largest gap in scaffolds: 1
+Base composition (A:C:G:T): 102144:112550:104859:100020
 GC content %: 51.82
 # soft-masked bases: 0
+# segments: 6
+Total segment length: 419573
+Average segment length: 69928.83
+# gaps: 3
 # paths: 3
 Scaffold N10: 417540
 Scaffold N20: 417540