Mercurial > repos > bgruening > gfastats
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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/gfastats commit 7de96873dbc693ce72d8d0aa734d1272a3d0f456
author | bgruening |
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date | Wed, 06 Nov 2024 11:28:41 +0000 |
parents | 3fba9c77550a |
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+++Assembly summary+++: # scaffolds: 3 Total scaffold length: 419576 Average scaffold length: 139858.67 Scaffold N50: 417540 Scaffold auN: 415520.91 Scaffold L50: 1 Largest scaffold: 417540 Smallest scaffold: 356 # contigs: 6 Total contig length: 419573 Average contig length: 69928.83 Contig N50: 416949 Contig auN: 414345.81 Contig L50: 1 Largest contig: 416949 Smallest contig: 101 # gaps in scaffolds: 3 Total gap length in scaffolds: 3 Average gap length in scaffolds: 1.00 Gap N50 in scaffolds: 1 Gap auN in scaffolds: 1.00 Gap L50 in scaffolds: 2 Largest gap in scaffolds: 1 Smallest gap in scaffolds: 1 Base composition (A:C:G:T): 102144:112550:104859:100020 GC content %: 51.82 # soft-masked bases: 0 # segments: 6 Total segment length: 419573 Average segment length: 69928.83 # gaps: 3 # paths: 3 Scaffold N10: 417540 Scaffold N20: 417540 Scaffold N30: 417540 Scaffold N40: 417540 Scaffold N50: 417540 Scaffold N60: 417540 Scaffold N70: 417540 Scaffold N80: 417540 Scaffold N90: 417540 Scaffold N100: 356 Scaffold L10: 1 Scaffold L20: 1 Scaffold L30: 1 Scaffold L40: 1 Scaffold L50: 1 Scaffold L60: 1 Scaffold L70: 1 Scaffold L80: 1 Scaffold L90: 1 Scaffold L100: 3 Contig N10: 416949 Contig N20: 416949 Contig N30: 416949 Contig N40: 416949 Contig N50: 416949 Contig N60: 416949 Contig N70: 416949 Contig N80: 416949 Contig N90: 416949 Contig N100: 101 Contig L10: 1 Contig L20: 1 Contig L30: 1 Contig L40: 1 Contig L50: 1 Contig L60: 1 Contig L70: 1 Contig L80: 1 Contig L90: 1 Contig L100: 6 Gap N10: 1 Gap N20: 1 Gap N30: 1 Gap N40: 1 Gap N50: 1 Gap N60: 1 Gap N70: 1 Gap N80: 1 Gap N90: 1 Gap N100: 1 Gap L10: 1 Gap L20: 1 Gap L30: 1 Gap L40: 2 Gap L50: 2 Gap L60: 2 Gap L70: 3 Gap L80: 3 Gap L90: 3 Gap L100: 3