Mercurial > repos > bgruening > interproscan

diff interproscan.xml @ 6:0cd163d805e3 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interproscan commit 959550b5431b15acf3609f536efc864fd0845b3c"
author iuc
date Wed, 24 Nov 2021 17:44:31 +0000
parents 2e1cf7d85dbc
children 1207025b9b9c
line wrap: on
line diff
--- a/interproscan.xml	Fri Nov 19 12:08:10 2021 +0000
+++ b/interproscan.xml	Wed Nov 24 17:44:31 2021 +0000
@@ -112,21 +112,21 @@
 
     <outputs>
         <data format="tabular" name="outfile_tsv" from_work_dir="output.tsv" label="InterProScan on ${on_string} (tsv)">
-            <filter>oformat and 'TSV' in outputs</filter>
+            <filter>oformat and 'TSV' in oformat</filter>
         </data>
         <data format="xml" name="outfile_xml" from_work_dir="output.xml" label="InterProScan on ${on_string} (xml)">
-            <filter>oformat and 'XML' in outputs</filter>
+            <filter>oformat and 'XML' in oformat</filter>
         </data>
         <data format="gff3" name="outfile_gff3" from_work_dir="output.gff3" label="InterProScan on ${on_string} (gff3)">
-            <filter>oformat and 'GFF3' in outputs</filter>
+            <filter>oformat and 'GFF3' in oformat</filter>
         </data>
         <data format="json" name="outfile_json" from_work_dir="output.json" label="InterProScan on ${on_string} (json)">
-            <filter>oformat and 'JSON' in outputs</filter>
+            <filter>oformat and 'JSON' in oformat</filter>
         </data>
     </outputs>
 
     <tests>
-        <test>
+        <test expect_num_outputs="1">
             <param name="input" value="prots.fa" />
             <param name="seqtype" value="p" />
             <param name="database" value="5.52-86.0" />
@@ -141,7 +141,7 @@
                 </assert_contents>
             </output>
         </test>
-        <test>
+        <test expect_num_outputs="4">
             <param name="input" value="prots.fa" />
             <param name="seqtype" value="p" />
             <param name="database" value="5.52-86.0" />
@@ -178,7 +178,7 @@
                 </assert_contents>
             </output>
         </test>
-        <test>
+        <test expect_num_outputs="4">
             <param name="input" value="transcripts.fa" />
             <param name="seqtype" value="n" />
             <param name="database" value="5.52-86.0" />
@@ -215,7 +215,7 @@
                 </assert_contents>
             </output>
         </test>
-        <test expect_failure="true">
+        <test expect_failure="true" expect_num_outputs="1">
             <param name="input" value="prots.fa" />
             <param name="seqtype" value="p" />
             <param name="database" value="5.52-86.0" />