Mercurial > repos > bgruening > interproscan
diff test-data/transcript_out/out.json @ 4:fcedfe919603 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interproscan commit 2f5d27a375fcc2e8d77914b3d9e402a9e2df2d97"
| author | iuc |
|---|---|
| date | Mon, 15 Nov 2021 17:53:24 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/transcript_out/out.json Mon Nov 15 17:53:24 2021 +0000 @@ -0,0 +1,1958 @@ +{ + "interproscan-version": "5.52-86.0", +"results": [ { + "id" : 2, + "sequence" : "atgccacccacgatcaacaattcggcggtaaacagtgccgccgaaaagcgaccccagcggcaaacggagcgcaaatccgagatcatttgccgcgtgaagtatggaaacaacctgccggatataccatttgatctgaagtttctgcagtaccccttcgacagccaccgcttcgtgcagtacaacccaacgtcgctagagcgtaacttcaagtatgacgtgctgacggaacacgatttgggtgtcacggtggacctgattaaccgggagctctatcaggccgactccatgacgctgctggaccccgccgatgaaaaactgctggaggaggagactctgacgcccacagactctgtgcgttcgcgccagcattcgaggacggtgtcatggttgcgcaaatccgagtacatctccaccgagcagacgcgcttccagccccagaacctggagaacatcgaggccaaggtcggttacaacgtcaagaagtcgcttcgggaggagactctctacctggaccgcgaagcccagatcaaagccatcgagaagaccttcagcgacaccaagagcgaaattaccaagcactattccaagcccaatgtggtgccagtggaggtactgcctatcttccccgacttcaccaactggaagttcccgtgcgcccaggtcatatttgacagtgatcccgctcctgcgggcaagaacgtgcccgcccagctggaggagatgtcgcaggccatgattcgtggtgtgatggacgagagcggcgaacagtttgtcgcctacttcctgcccacagagcagacgctggagaaacgccgtacagacttcatcaatggcgagctgtacaaggaggaggaggagtacgagtacaagatcgctcgagagtacaactggaacgtgaagaccaaagcttccaagggctacgaagaaaactacttcttcgtgatgcgtcaggacggcatctactacaacgagctagaaacccgtgtgcgccttaacaagcgtcgcgttaaggttggccagcaacccaacaacaccaagctggttgtcaagcatcgtccattggacagcatggagcatcgtatgcagcgctatcgcgagcgccagctagaagttcctggcgaggaggaggagatcgtggaagaagtgagggaagaggagcaaatgcaaatcattggcgagacggagaagacgagcgaggacgcagctgttggcgcacaggcagcatctggagcggactcacccgcccaggtagcccgcgatcgacagtctcgttctcggagtcgaactcgcagcgg", 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+ }, { + "signature" : { + "accession" : "mobidb-lite", + "name" : "disorder_prediction", + "description" : "consensus disorder prediction", + "signatureLibraryRelease" : { + "library" : "MOBIDB_LITE", + "version" : "2.0" + }, + "entry" : null + }, + "locations" : [ { + "start" : 1, + "end" : 22, + "location-fragments" : [ { + "start" : 1, + "end" : 22, + "dc-status" : "CONTINUOUS" + } ], + "sequence-feature" : "Polar" + } ], + "model-ac" : "mobidb-lite" + }, { + "signature" : { + "accession" : "mobidb-lite", + "name" : "disorder_prediction", + "description" : "consensus disorder prediction", + "signatureLibraryRelease" : { + "library" : "MOBIDB_LITE", + "version" : "2.0" + }, + "entry" : null + }, + "locations" : [ { + "start" : 1, + "end" : 95, + "location-fragments" : [ { + "start" : 1, + "end" : 95, + "dc-status" : "CONTINUOUS" + } ], + "sequence-feature" : "" + } ], + "model-ac" : "mobidb-lite" + }, { + "signature" : { + "accession" : "mobidb-lite", + "name" : 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"md5" : "8b5d5a32bfde4a734177a55dd9418154", + "matches" : [ ], + "xref" : [ { + "name" : "orf321 source=FUN_000012-T1 coords=1110..595 length=172 frame=4 desc=FUN_000012", + "id" : "orf321" + } ] + }, + "nucleotideSequence" : 1 + }, { + "id" : 13, + "start" : 8374, + "end" : 8925, + "strand" : "ANTISENSE", + "protein" : { + "sequence" : "YFCYIGRTYCHFLVQNDLISTLDFACIVCFDVFHYYGSPDSTRWRRRPVKRILRLLERQACLPAERLGHWFVQVRHGVQRVSWLYRHVIEGNFRQWPVLRVLAARIGKAHKCVPLYIITLLFVYMGHRETSRDQGWRLGFIKTTKTGETIPSSRIAWNFRHLRRCSSVSIRNISKICITSRIGA", + "md5" : "c792986b585ed45b03b6c21ff3976fe4", + "matches" : [ ], + "xref" : [ { + "name" : "orf196 source=FUN_000012-T1 coords=8925..8374 length=184 frame=4 desc=FUN_000012", + "id" : "orf196" + } ] + }, + "nucleotideSequence" : 1 + }, { + "id" : 3, + "start" : 1567, + "end" : 2208, + "strand" : "ANTISENSE", + "protein" : { + "sequence" : "LGFAIYSGIYVVAFVKIEVLAIRDLVLLVCRAVKVRILVVPHVVDIGVDYVVRFSFGRVGIGVVEHAWDSCDRSCGRWALAKPEPKAEADAAAAEAAPIVSRLMVDAVKSESTSSSTNSSSSSSPTGSPSSSSVSAVPGSSASSSNSIELLRSTERTTVLVLCIVLWLVLLLGVLMLMSCIVIAWMHTSRIGTALLVVAAVTGRSPRLRSLGRK", + "md5" : "796ae4d6bd379b343d45415308fabd86", + "matches" : [ { + "signature" : { + "accession" : "mobidb-lite", + "name" : "disorder_prediction", + "description" : "consensus disorder prediction", + "signatureLibraryRelease" : { + "library" : "MOBIDB_LITE", + "version" : "2.0" + }, + "entry" : null + }, + "locations" : [ { + "start" : 113, + "end" : 138, + "location-fragments" : [ { + "start" : 113, + "end" : 138, + "dc-status" : "CONTINUOUS" + } ], + "sequence-feature" : "" + } ], + "model-ac" : "mobidb-lite" + } ], + "xref" : [ { + "name" : "orf304 source=FUN_000012-T1 coords=2208..1567 length=214 frame=4 desc=FUN_000012", + "id" : "orf304" + } ] + }, + "nucleotideSequence" : 1 + }, { + "id" : 9, + "start" : 7053, + "end" : 7601, + "strand" : "ANTISENSE", + "protein" : 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