Mercurial > repos > bgruening > interproscan
changeset 4:fcedfe919603 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interproscan commit 2f5d27a375fcc2e8d77914b3d9e402a9e2df2d97"
| author | iuc |
|---|---|
| date | Mon, 15 Nov 2021 17:53:24 +0000 |
| parents | 8ee90fc5fe11 |
| children | 2e1cf7d85dbc |
| files | README.md interproscan.xml macros.xml readme.rst test-data/interproscan.loc test-data/prot_out/out.gff3 test-data/prot_out/out.json test-data/prot_out/out.tsv test-data/prot_out/out.xml test-data/prots.fa test-data/transcript_out/out.gff3 test-data/transcript_out/out.json test-data/transcript_out/out.tsv test-data/transcript_out/out.xml test-data/transcripts.fa tool-data/interproscan.loc.sample tool_data_table_conf.xml.sample tool_data_table_conf.xml.test |
| diffstat | 18 files changed, 7686 insertions(+), 312 deletions(-) [+] |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/README.md Mon Nov 15 17:53:24 2021 +0000 @@ -0,0 +1,12 @@ +# InterProScan + +## Licensed software/data + +The standard install of InterProScan does not include the following components, because their license does not allow redistribution: + +- SignalP +- TMHMM +- Phobius +- SMART data (THRESHOLD file) + +As a Galaxy instance admin, you can install those manually if needed, as long as you (and the Galaxy users) respect the respective licenses.
--- a/interproscan.xml Tue Oct 08 10:22:52 2013 -0400 +++ b/interproscan.xml Mon Nov 15 17:53:24 2021 +0000 @@ -1,243 +1,332 @@ -<tool id="interproscan" name="Interproscan functional predictions of ORFs" version="1.2"> - <description>Interproscan functional predictions of ORFs</description> - <command> -## The command is a Cheetah template which allows some Python based syntax. -## Lines starting hash hash are comments. Galaxy will turn newlines into spaces +<tool id="interproscan" name="InterProScan" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="20.09"> + <description>functional annotation</description> + <macros> + <import>macros.xml</import> + </macros> + <xrefs> + <xref type="bio.tools">interproscan_4</xref> + </xrefs> + <requirements> + <requirement type="package" version="@TOOL_VERSION@">interproscan</requirement> + </requirements> + <version_command>interproscan.sh --version</version_command> + <command><![CDATA[ +## Adapt properties file to use data from data table +mkdir -p \$HOME/.interproscan-5 +&& +sed 's|^\(data.directory=\).*$|\1${database.fields.path}|' \$(dirname \$(readlink -f \$(command -v interproscan.sh)))/interproscan.properties > \$HOME/.interproscan-5/interproscan.properties +&& + +## Now run interproscan +interproscan.sh -## create temp directory -#import tempfile, os -#set $tfile = tempfile.mkstemp()[1] +## disables the precalculated lookup service, all calculation will be run locally +-dp +--input '$input' +--seqtype $seqtype +-f ${','.join($oformat)} + +#if $licensed.use == 'true' and $licensed.applications_licensed: + --applications ${','.join($applications)},${','.join($licensed.applications_licensed)} +#else: + --applications ${','.join($applications)} +#end if +--tempdir \$TEMP -sed 's/ /_/g' $input > $tfile; +$pathways +$goterms +$iprlookup + +--cpu \${GALAXY_SLOTS:-4} + +--output-file-base 'output' + ]]></command> + <inputs> + <param argument="--input" type="data" format="fasta" label="Protein FASTA File"/> + + <param argument="--seqtype" type="select" label="Type of the input sequences" help=""> + <option value="p" selected="true">Protein</option> + <option value="n">DNA / RNA</option> + </param> -## Hack, because interproscan does not seem to produce gff output even if it is configured -#if str($oformat) == "gff": - #set $tfile2 = tempfile.mkstemp()[1] - iprscan -cli -nocrc -i $tfile -o $tfile2 -goterms -seqtype p -altjobs -format raw -appl $appl 2>&1; - converter.pl -format gff3 -input $tfile2 -output $output; - rm $tfile2; -#else - iprscan -cli -nocrc -i $tfile -o $output -goterms -seqtype p -altjobs -format $oformat -appl $appl 2>&1; -#end if + <param name="database" label="InterProScan database" type="select"> + <options from_data_table="interproscan"> + <column name="value" index="0" /> + <column name="name" index="1" /> + <column name="path" index="3" /> + <filter type="sort_by" column="0" /> + <filter type="static_value" column="2" value="@TOOL_VERSION@" /> + </options> + </param> + + <param name="applications" type="select" multiple="True" label="Applications to run" help="Select your program"> + <option value="TIGRFAM" selected="true">TIGRFAM: protein families based on hidden Markov models (HMMs)</option> + <option value="SFLD" selected="true">SFLD: a database of protein families based on hidden Markov models (HMMs)</option> + <option value="SUPERFAMILY" selected="true">SUPERFAMILY: database of structural and functional annotation for all proteins and genomes</option> + <option value="PANTHER" selected="true">PANTHER: Protein ANalysis THrough Evolutionary Relationships</option> + <option value="Gene3D" selected="true">Gene3d: Structural assignment for whole genes and genomes using the CATH domain structure database</option> + <option value="Hamap" selected="true">HAMAP: High-quality Automated Annotation of Microbial Proteomes</option> + <option value="PrositeProfiles" selected="true">PROSITE Profiles: protein domains, families and functional sites as well as associated profiles to identify them</option> + <option value="Coils" selected="true">Coils: Prediction of Coiled Coil Regions in Proteins</option> + <option value="SMART" selected="true">SMART: identification and analysis of domain architectures based on Hidden Markov Models or HMMs</option> + <option value="CDD" selected="true">SMART: protein domains and families based on well-annotated multiple sequence alignment models</option> + <option value="PRINTS" selected="true">PRINTS: group of conserved motifs (fingerprints) used to characterise a protein family</option> + <option value="PIRSR" selected="true">PIRSR: protein families based on hidden Markov models (HMMs) and Site Rules</option> + <option value="PrositePatterns" selected="true">PROSITE Pattern: protein domains, families and functional sites as well as associated patterns to identify them</option> + <option value="Pfam" selected="true">Pfam: protein families, each represented by multiple sequence alignments and hidden Markov models</option> + <option value="MobiDBLite" selected="true">MobiDBLite: Prediction of intrinsically disordered regions in proteins</option> + <option value="PIRSF" selected="true">PIRSF: non-overlapping clustering of UniProtKB sequences into a hierarchical order (evolutionary relationships)</option> + </param> -rm $tfile + <conditional name="licensed"> + <param name="use" type="select" label="Use applications with restricted license, only for non-commercial use?" help="The corresponding tools must be installed manually by the administrator of this Galaxy instance" > + <option value="false" selected="true">No</option> + <option value="true">Yes</option> + </param> + <when value="false" /> + <when value="true"> + <param name="applications_licensed" type="select" multiple="True" label="Applications to run" help="Select your programm."> + <option value="Phobius" selected="true">Phobius: combined transmembrane topology and signal peptide predictor</option> + <option value="SignalP_GRAM_NEGATIVE" selected="false">SignalP (gram-negative): signal peptide cleavage sites in amino acid sequences for gram-negative prokaryotes</option> + <option value="SignalP_EUK" selected="true">SignalP (eukaryotes): signal peptide cleavage sites in amino acid sequences for eukaryotes</option> + <option value="SignalP_GRAM_POSITIVE" selected="false">SignalP (Gram Positive Bacteria): signal peptide cleavage sites in amino acid sequences for gram-positive prokaryotes</option> + <option value="TMHMM" selected="true">TMHMM: Prediction of transmembrane helices in proteins</option> + </param> + </when> + </conditional> - </command> - <inputs> - <param name="input" type="data" format="fasta" label="Protein Fasta File"/> + <param argument="--pathways" truevalue="--pathways" falsevalue="" checked="True" type="boolean" label="Include pathway information" + help="Option that provides mappings from matches to pathway information, which is based on the matched manually curated InterPro entries."/> + <param argument="--goterms" truevalue="--goterms" falsevalue="" checked="True" type="boolean" label="Include Gene Ontology (GO) mappings" + help="Look up of corresponding Gene Ontology annotation. Implies -iprlookup option."/> + <param argument="--iprlookup" truevalue="--iprlookup" falsevalue="" checked="False" type="boolean" + label="Provide additional mappings" help="Provide mappings from matched member database signatures to the InterPro entries that they are integrated into"/> + + <param name="oformat" type="select" multiple="true" label="Output format" help="Please select a output format (JSON output can be visualised on https://www.ebi.ac.uk/interpro/result/InterProScan/)."> + <option value="TSV" selected="true">Tab-separated values format (TSV)</option> + <option value="GFF3">GFF3</option> + <option value="XML">XML</option> + <option value="JSON">JSON</option> + </param> + </inputs> - <param name="appl" type="select" format="text" label="Applications to run" help="Select your programm."> - <option value="blastprodom+coils+gene3d+hamap+hmmpanther+hmmpir+hmmpfam+hmmsmart+hmmtigr+fprintscan+patternscan+profilescan+superfamily+seg+signalp+tmhmm" selected="true">all</option> - <option value="seg">seg</option> - <option value="signalp">signalp</option> - <option value="tmhmm">tmhmm</option> - <option value="fprintscan">fprintscan</option> - <option value="patternscan">patternscan</option> - <option value="profilescan">profilescan</option> - <option value="superfamily">superfamily</option> - <option value="hmmpir">hmmpir</option> - <option value="hmmpfam">hmmpfam</option> - <option value="hmmsmart">hmmsmart</option> - <option value="hmmtigr">hmmtigr</option> - <option value="hmmpanther">hmmpanther</option> - <option value="hamap">hamap</option> - <option value="gene3d">gene3d</option> - <option value="coils">coils</option> - <option value="blastprodom">blastprodom</option> - </param> + <outputs> + <data format="tabular" name="outfile_tsv" from_work_dir="output.tsv" label="InterProScan on ${on_string} (tsv)"> + <filter>oformat and 'TSV' in outputs</filter> + </data> + <data format="xml" name="outfile_xml" from_work_dir="output.xml" label="InterProScan on ${on_string} (xml)"> + <filter>oformat and 'XML' in outputs</filter> + </data> + <data format="gff3" name="outfile_gff3" from_work_dir="output.gff3" label="InterProScan on ${on_string} (gff3)"> + <filter>oformat and 'GFF3' in outputs</filter> + </data> + <data format="json" name="outfile_json" from_work_dir="output.json" label="InterProScan on ${on_string} (json)"> + <filter>oformat and 'JSON' in outputs</filter> + </data> + </outputs> - <param name="oformat" type="select" label="Output format" help="Please select a output format."> - <option value="gff">gff</option> - <option value="raw" selected="true">raw</option> - <option value="txt">txt</option> - <option value="html">html</option> - <option value="xml">xml</option> - <option value="ebixml">EBI header on top of xml</option> - </param> - - </inputs> - <outputs> + <tests> + <test> + <param name="input" value="prots.fa" /> + <param name="seqtype" value="p" /> + <param name="database" value="5.52-86.0" /> + <param name="applications" value="MobiDBLite" /> + <param name="oformat" value="TSV" /> + <output name="outfile_tsv"> + <assert_contents> + <has_text text="FUN_000011-T1" /> + <has_text text="ea9924e11f7decc417e8d9ed8b9c682e" /> + <has_text text="FUN_000012-T1" /> + <has_text text="01beedc2fbf8012cba37f0c0d39aa071" /> + </assert_contents> + </output> + </test> + <test> + <param name="input" value="prots.fa" /> + <param name="seqtype" value="p" /> + <param name="database" value="5.52-86.0" /> + <param name="applications" value="MobiDBLite" /> + <param name="oformat" value="TSV,GFF3,XML,JSON" /> + <output name="outfile_tsv"> + <assert_contents> + <has_text text="FUN_000011-T1" /> + <has_text text="ea9924e11f7decc417e8d9ed8b9c682e" /> + <has_text text="FUN_000012-T1" /> + <has_text text="01beedc2fbf8012cba37f0c0d39aa071" /> + </assert_contents> + </output> + <output name="outfile_xml"> + <assert_contents> + <has_text text="mobidblite-location" /> + <has_text text="Polyampholyte" /> + <has_text text="consensus disorder prediction" /> + <has_text text="FUN_000011-T1 FUN_000011" /> + </assert_contents> + </output> + <output name="outfile_gff3"> + <assert_contents> + <has_text text="protein_match" /> + <has_text text="ID=FUN_000011-T1;md5=" /> + <has_text text="MobiDBLite" /> + </assert_contents> + </output> + <output name="outfile_json"> + <assert_contents> + <has_text text="signatureLibraryRelease" /> + <has_text text="disorder_prediction" /> + <has_text text="Polyampholyte" /> + </assert_contents> + </output> + </test> + <test> + <param name="input" value="transcripts.fa" /> + <param name="seqtype" value="n" /> + <param name="database" value="5.52-86.0" /> + <param name="applications" value="MobiDBLite" /> + <param name="oformat" value="TSV,GFF3,XML,JSON" /> + <output name="outfile_tsv"> + <assert_contents> + <has_text text="FUN_000018-T1_orf336" /> + <has_text text="0b28fe115d4cc09260b038b19fb0b21d" /> + <has_text text="FUN_000012-T1_orf133" /> + <has_text text="01beedc2fbf8012cba37f0c0d39aa071" /> + </assert_contents> + </output> + <output name="outfile_xml"> + <assert_contents> + <has_text text="mobidblite-location" /> + <has_text text="Polyampholyte" /> + <has_text text="consensus disorder prediction" /> + <has_text text="orf355" /> + </assert_contents> + </output> + <output name="outfile_gff3"> + <assert_contents> + <has_text text="protein_match" /> + <has_text text="ID=FUN_000012-T1;" /> + <has_text text="MobiDBLite" /> + </assert_contents> + </output> + <output name="outfile_json"> + <assert_contents> + <has_text text="signatureLibraryRelease" /> + <has_text text="disorder_prediction" /> + <has_text text="Polyampholyte" /> + </assert_contents> + </output> + </test> + <test expect_failure="true"> + <param name="input" value="prots.fa" /> + <param name="seqtype" value="p" /> + <param name="database" value="5.52-86.0" /> + <param name="applications" value="MobiDBLite" /> + <conditional name="licensed"> + <param name="use" value="true" /> + <param name="applications_licensed" value="Phobius,TMHMM" /> + </conditional> + <param name="oformat" value="TSV" /> + <assert_stdout> + <!-- expected to be "deactivated" as they are not installed by default --> + <has_text text="Analysis Phobius does not exist or is deactivated" /> + <has_text text="Analysis TMHMM does not exist or is deactivated" /> + </assert_stdout> + </test> + </tests> - <data format="txt" name="output" label="Interproscan calculation on ${on_string}"> - <change_format> - <when input="oformat" value="html" format="html"/> - <when input="oformat" value="xml" format="xml"/> - <when input="oformat" value="ebixml" format="xml"/> - <when input="oformat" value="gff" format="gff"/> - </change_format> - </data> + <help><![CDATA[ - </outputs> - <requirements> - </requirements> - <help> **What it does** -Interproscan is a batch tool to query the Interpro database. It provides annotations based on multiple searches of profile and other functional databases. -These include SCOP, CATH, PFAM and SUPERFAMILY. +Interproscan is a batch tool to query the InterPro database. It provides annotations based on multiple searches of profile and other functional databases. + +Phobius (licensed software), SignalP, SMART (licensed components) and TMHMM use +licensed code and data provided by third parties. If you wish to run these +analyses it will be necessary for you to obtain a licence from the vendor and +configure the Galaxy server InterProScan installation to use them. **Input** -Required is a FASTA file containing ORF predictions. This file must NOT contain any spaces in the FASTA headers - any spaces will be convereted to underscores ``_`` by this tool before running with Interproscan. +Required is a FASTA file containing protein or nucleotide sequences. **Output** -Example for the raw format. -The output will consist of a tabular file with 14 columns and can be easily concatenated or filtered. +In this version of InterProScan, you can retrieve output in any of the following five formats: -====== ================================================================ ====================================================================== -column example description -====== ================================================================ ====================================================================== -c1 NF00181542 id of the input sequence -c2 27A9BBAC0587AB84 crc64 (checksum) of the protein sequence (supposed to be unique) -c3 272 length of the sequence (in AA) -c4 HMMPIR anaysis method launched. -c5 PIRSF001424 database members entry for this match -c6 Prephenate dehydratase database member description for the entry -c7 1 start of the domain match -c8 270 end of the domain match -c9 6.5e-141 evalue of the match (reported by member database method) -c10 T status of the match (T: true, ?: unknown) -c11 06-Aug-2005 date of the run. -c12 IPR008237 corresponding InterPro entry (if iprlookup requested by the user) -c13 Prephenate dehydratase with ACT region description of the InterPro entry -c14 Molecular Function:prephenate dehydratase activity (GO:0004664) GO (gene ontology) description for the InterPro entry -====== ================================================================ ====================================================================== + * TSV: tab-separated values format + * XML: XML format + * GFF: The GFF 3.0 format + * JSON: A JSON representation of the protein matches that can be visualised on https://www.ebi.ac.uk/interpro/result/InterProScan/ -**Database updates** - -Typically these take place 2-3 times a year. Please contact your Galaxy administrator to update the databases. - ------ -Tools ------ +**Example Output** -**PROSITE patterns** - Some biologically significant amino acid patterns can be summarised in - the form of regular expressions. - ScanRegExp (by Wolfgang.Fleischmann@ebi.ac.uk). -**PROSITE profiles** - There are a number of protein families as well as functional or - structural domains that cannot be detected using patterns due to their extreme - sequence divergence, so the use of techniques based on weight matrices - (also known as profiles) allows the detection of such proteins or domains. - A profile is a table of position-specific amino acid weights and gap costs. - The profile structure used in PROSITE is similar to but slightly more general - (Bucher P. et al., 1996) than the one introduced by M. Gribskov and - co-workers. - pfscan from the Pftools package (by Philipp.Bucher@isrec.unil.ch). +:: -**PRINTS** - The PRINTS database houses a collection of protein family fingerprints. - These are groups of motifs that together are diagnostically more - powerful than single motifs by making use of the biological context inherent in a - multiple-motif method. The fingerprinting method arose from the need for - a reliable technique for detecting members of large, highly divergent - protein super-families. - FingerPRINTScan (Scordis P. et al., 1999). + P51587 14086411a2cdf1c4cba63020e1622579 3418 Pfam PF09103 BRCA2, oligonucleotide/oligosaccharide-binding, domain 1 2670 2799 7.9E-43 T 15-03-2013 + P51587 14086411a2cdf1c4cba63020e1622579 3418 ProSiteProfiles PS50138 BRCA2 repeat profile. 1002 1036 0.0 T 18-03-2013 IPR002093 BRCA2 repeat GO:0005515|GO:0006302 + P51587 14086411a2cdf1c4cba63020e1622579 3418 Gene3D G3DSA:2.40.50.140 2966 3051 3.1E-52 T 15-03-2013 + ... -**PFAM** - Pfam is a database of protein domain families. Pfam contains curated - multiple sequence alignments for each family and corresponding hidden - Markov models (HMMs) (Eddy S.R., 1998). - Profile hidden Markov models are statistical models of the primary - structure consensus of a sequence family. The construction and use - of Pfam is tightly tied to the HMMER software package. - hmmpfam from the HMMER2.3.2 package (by Sean Eddy, - eddy@genetics.wustl.edu, http://hmmer.wustl.edu). -**PRODOM** - ProDom is a database of protein domain families obtained by automated - analysis of the SWISS-PROT and TrEMBL protein sequences. It is useful - for analysing the domain arrangements of complex protein families and the - homology relationships in modular proteins. ProDom families are built by - an automated process based on a recursive use of PSI-BLAST homology - searches. - ProDomBlast3i.pl (by Emmanuel Courcelle emmanuel.courcelle@toulouse.inra.fr - and Yoann Beausse beausse@toulouse.inra.fr) - a wrapper on top of the Blast package (Altschul S.F. et al., 1997). - -**SMART** - SMART (a Simple Modular Architecture Research Tool) allows the - identification and annotation of genetically mobile domains and the - analysis of domain architectures. These domains are extensively - annotated with respect to phyletic distributions, functional class, tertiary - structures and functionally important residues. SMART alignments are - optimised manually and following construction of corresponding hidden Markov models (HMMs). - hmmpfam from the HMMER2.3.2 package (by Sean Eddy, - eddy@genetics.wustl.edu, http://hmmer.wustl.edu). - -**TIGRFAMs** - TIGRFAMs are a collection of protein families featuring curated multiple - sequence alignments, Hidden Markov Models (HMMs) and associated - information designed to support the automated functional identification - of proteins by sequence homology. Classification by equivalog family - (see below), where achievable, complements classification by orthologs, - superfamily, domain or motif. It provides the information best suited - for automatic assignment of specific functions to proteins from large - scale genome sequencing projects. - hmmpfam from the HMMER2.3.2 package (by Sean Eddy, - eddy@genetics.wustl.edu, http://hmmer.wustl.edu). - -**PIR SuperFamily** - PIR SuperFamily (PIRSF) is a classification system based on evolutionary - relationship of whole proteins. - hmmpfam from the HMMER2.3.2 package (by Sean Eddy, - eddy@genetics.wustl.edu, http://hmmer.wustl.edu). +The TSV format presents the match data in columns as follows: -**SUPERFAMILY** - SUPERFAMILY is a library of profile hidden Markov models that represent - all proteins of known structure, based on SCOP. - hmmpfam/hmmsearch from the HMMER2.3.2 package (by Sean Eddy, - eddy@genetics.wustl.edu, http://hmmer.wustl.edu). - Optionally, predictions for coiled-coil, signal peptide cleavage sites - (SignalP v3) and TM helices (TMHMM v2) are supported (See the FAQs file for details). - -**GENE3D** - Gene3D is supplementary to the CATH database. This protein sequence database - contains proteins from complete genomes which have been clustered into protein - families and annotated with CATH domains, Pfam domains and functional - information from KEGG, GO, COG, Affymetrix and STRINGS. - hmmpfam from the HMM2.3.2 package (by Sean Eddy, - eddy@genetics.wustl.edu, http://hmmer.wustl.edu). - -**PANTHER** - The PANTHER (Protein ANalysis THrough Evolutionary Relationships) - Classification System was designed to classify proteins (and their genes) - in order to facilitate high-throughput analysis. - hmmsearch from the HMM2.3.2 package (by Sean Eddy, - eddy@genetics.wustl.edu, http://hmmer.wustl.edu). - and blastall from the Blast package (Altschul S.F. et al., 1997). - ----------- -References ----------- - -Zdobnov EM, Apweiler R (2001) -InterProScan an integration platform for the signature-recognition methods in InterPro. -Bioinformatics 17, 847-848. -http://dx.doi.org/10.1093/bioinformatics/17.9.847 - -Quevillon E, Silventoinen V, Pillai S, Harte N, Mulder N, Apweiler R, Lopez R (2005) -InterProScan: protein domains identifier. -Nucleic Acids Research 33 (Web Server issue), W116-W120. -http://dx.doi.org/10.1093/nar/gki442 - -Hunter S, Apweiler R, Attwood TK, Bairoch A, Bateman A, Binns D, Bork P, Das U, Daugherty L, Duquenne L, Finn RD, Gough J, Haft D, Hulo N, Kahn D, Kelly E, Laugraud A, Letunic I, Lonsdale D, Lopez R, Madera M, Maslen J, McAnulla C, McDowall J, Mistry J, Mitchell A, Mulder N, Natale D, Orengo C, Quinn AF, Selengut JD, Sigrist CJ, Thimma M, Thomas PD, Valentin F, Wilson D, Wu CH, Yeats C. (2009) -InterPro: the integrative protein signature database. -Nucleic Acids Research 37 (Database Issue), D224-228. -http://dx.doi.org/10.1093/nar/gkn785 + - Protein Accession (e.g. P51587) + - Sequence MD5 digest (e.g. 14086411a2cdf1c4cba63020e1622579) + - Sequence Length (e.g. 3418) + - Analysis (e.g. Pfam / PRINTS / Gene3D) + - Signature Accession (e.g. PF09103 / G3DSA:2.40.50.140) + - Signature Description (e.g. BRCA2 repeat profile) + - Start location + - Stop location + - Score - is the e-value of the match reported by member database method (e.g. 3.1E-52) + - Status - is the status of the match (T: true) + - Date - is the date of the run + - (InterProScan annotations - accession (e.g. IPR002093) - optional column; only displayed if -iprscan option is switched on) + - (InterProScan annotations - description (e.g. BRCA2 repeat) - optional column; only displayed if -iprscan option is switched on) + - (GO annotations (e.g. GO:0005515) - optional column; only displayed if --goterms option is switched on) + - (Pathways annotations (e.g. REACT_71) - optional column; only displayed if --pathways option is switched on) -This wrapper is available to install into other Galaxy Instances via the Galaxy Tool Shed at -http://toolshed.g2.bx.psu.edu/view/bgruening/interproscan +**Extensible Markup Language (XML)** + +XML representation of the matches - this is the richest form of the data. The XML Schema Definition (XSD) is available [http://www.ebi.ac.uk/interpro/resources/schemas/interproscan5 here]. + +**Generic Feature Format Version 3 (GFF3)** + +The GFF3 format is a flat tab-delimited file, which is much richer then the TSV output format. It allows you to trace back from matches to predicted proteins and to nucleic acid sequences. It also contains a FASTA format representation of the predicted protein sequences and their matches. You will find a documentation of all the columns and attributes used on [https://github.com/The-Sequence-Ontology/Specifications/blob/master/gff3.md]. + +**Example Output** -**Galaxy Wrapper Author**:: +:: - * Bjoern Gruening, Pharmaceutical Bioinformatics, University of Freiburg - * Konrad Paszkiewicz, Exeter Sequencing Service, University of Exeter + ##gff-version 3 + ##feature-ontology http://song.cvs.sourceforge.net/viewvc/song/ontology/sofa.obo?revision=1.269 + ##sequence-region AACH01000027 1 1347 + ##seqid|source|type|start|end|score|strand|phase|attributes + AACH01000027 provided_by_user nucleic_acid 1 1347 . + . Name=AACH01000027;md5=b2a7416cb92565c004becb7510f46840;ID=AACH01000027 + AACH01000027 getorf ORF 1 1347 . + . Name=AACH01000027.2_21;Target=pep_AACH01000027_1_1347 1 449;md5=b2a7416cb92565c004becb7510f46840;ID=orf_AACH01000027_1_1347 + AACH01000027 getorf polypeptide 1 449 . + . md5=fd0743a673ac69fb6e5c67a48f264dd5;ID=pep_AACH01000027_1_1347 + AACH01000027 Pfam protein_match 84 314 1.2E-45 + . Name=PF00696;signature_desc=Amino acid kinase family;Target=null 84 314;status=T;ID=match$8_84_314;Ontology_term="GO:0008652";date=15-04-2013;Dbxref="InterPro:IPR001048","Reactome:REACT_13" + ##sequence-region 2 + ... + >pep_AACH01000027_1_1347 + LVLLAAFDCIDDTKLVKQIIISEIINSLPNIVNDKYGRKVLLYLLSPRDPAHTVREIIEV + LQKGDGNAHSKKDTEIRRREMKYKRIVFKVGTSSLTNEDGSLSRSKVKDITQQLAMLHEA + GHELILVSSGAIAAGFGALGFKKRPTKIADKQASAAVGQGLLLEEYTTNLLLRQIVSAQI + LLTQDDFVDKRRYKNAHQALSVLLNRGAIPIINENDSVVIDELKVGDNDTLSAQVAAMVQ + ADLLVFLTDVDGLYTGNPNSDPRAKRLERIETINREIIDMAGGAGSSNGTGGMLTKIKAA + TIATESGVPVYICSSLKSDSMIEAAEETEDGSYFVAQEKGLRTQKQWLAFYAQSQGSIWV + DKGAAEALSQYGKSLLLSGIVEAEGVFSYGDIVTVFDKESGKSLGKGRVQFGASALEDML + RSQKAKGVLIYRDDWISITPEIQLLFTEF + ... + >match$8_84_314 + KRIVFKVGTSSLTNEDGSLSRSKVKDITQQLAMLHEAGHELILVSSGAIAAGFGALGFKK + RPTKIADKQASAAVGQGLLLEEYTTNLLLRQIVSAQILLTQDDFVDKRRYKNAHQALSVL + LNRGAIPIINENDSVVIDELKVGDNDTLSAQVAAMVQADLLVFLTDVDGLYTGNPNSDPR + AKRLERIETINREIIDMAGGAGSSNGTGGMLTKIKAATIATESGVPVYICS - </help> +]]></help> + + <expand macro="citations" /> </tool>
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/macros.xml Mon Nov 15 17:53:24 2021 +0000 @@ -0,0 +1,15 @@ +<?xml version="1.0"?> +<macros> + <token name="@TOOL_VERSION@">5.52-86.0</token> + <token name="@VERSION_SUFFIX@">0</token> + + <xml name="citations"> + <citations> + <citation type="doi">10.1093/bioinformatics/btu031</citation> + <citation type="doi">10.7717/peerj.167</citation> + <citation type="doi">10.1093/bioinformatics/17.9.847</citation> + <citation type="doi">10.1093/nar/gki442</citation> + <citation type="doi">10.1093/nar/gkn785</citation> + </citations> + </xml> +</macros>
--- a/readme.rst Tue Oct 08 10:22:52 2013 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,101 +0,0 @@ -================================================== -Galaxy wrapper for InterProScan 4 prediction tools -================================================== - -**Note**: - -This wrapper is for InterProScan 4.x if you want to use InterProScan 5 please have a look at: -http://toolshed.g2.bx.psu.edu/view/bgruening/interproscan5 - ------ - -InterProScan is a tool that combines different protein signature recognition methods native to the InterPro -member databases into one resource with look up of corresponding InterPro and GO annotation. - -This wrapper is copyright 2012-2013 by: - * Bjoern Gruening, Pharmaceutical Bioinformatics, University of Freiburg - * Konrad Paszkiewicz, Exeter Sequencing Service, University of Exeter - - -This prepository contains wrapper for the InterProScan_ command line tool. - -.. _InterProScan: http://www.ebi.ac.uk/interpro/ - - -Zdobnov E.M. and Apweiler R. "InterProScan - an integration platform for the signature-recognition methods in InterPro" Bioinformatics, 2001, 17(9): p. 847-8. - - -============ -Installation -============ - -Please download install InterProScan according to: - -ftp://ftp.ebi.ac.uk/pub/software/unix/iprscan/Installing_InterProScan.txt - -Please see also: -ftp://ftp.ebi.ac.uk/pub/software/unix/iprscan/index.html - -And rebuild the indizes if necessary - -.. code:: - - index_data.pl -f interpro.xml -inx -v -bin -bforce - index_data.pl -f match_complete.xml -inx -v -bin -bforce - index_data.pl -f Pfam-A.seed -inx -v -bin -bforce - index_data.pl -f Pfam-C -inx -v -bin -bforce - index_data.pl -f prints.pval -inx -v -bin -bforce - index_data.pl -f sf.seq -inx -v -bin -bforce - index_data.pl -f sf_hmm -inx -v -bin -bforce - index_data.pl -f smart.HMMs -inx -v -bin -bforce - index_data.pl -f superfamily.hmm -inx -v -bin -bforce - index_data.pl -f TIGRFAMs_HMM.LIB -inx -v -bin -bforce - - -Add the tool definition to your tool_conf.xml file under Galaxy root: -.. code:: - - <tool file="iprscan/interproscan.xml" /> - -============= -Input formats -============= - -The standard interproscan input is either genomic or protein sequences. In the case of genomic sequences Interproscan will run an ORF -prediction tool. However this tends to lose the ORF information (e.g. start/end co-ordinates) from the header. As such the requirement here is to input ORF -sequences (e.g. from EMBOSS getorf) and to then replace any spaces in the FASTA header with underscores. This workaround generally preserves the relevant -positional information. - - -======= -History -======= - -interproscan: - - - v1.1: Initial public release - - v1.2: Merge with Konrad Paszkiewicz repository - - -============= -Licence (MIT) -============= - -Permission is hereby granted, free of charge, to any person obtaining a copy -of this software and associated documentation files (the "Software"), to deal -in the Software without restriction, including without limitation the rights -to use, copy, modify, merge, publish, distribute, sublicense, and/or sell -copies of the Software, and to permit persons to whom the Software is -furnished to do so, subject to the following conditions: - -The above copyright notice and this permission notice shall be included in -all copies or substantial portions of the Software. - -THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR -IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, -FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE -AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER -LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, -OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN -THE SOFTWARE. -
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/interproscan.loc Mon Nov 15 17:53:24 2021 +0000 @@ -0,0 +1,8 @@ +# this is a tab separated file describing the location of interproscan databases used for the +# interproscan annotation tool +# +# the columns are: +# value description interproscan_version path +# +# for example +5.52-86.0 InterProScan 5.52-86.0 5.52-86.0 ${__HERE__}/fake_db/
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/prot_out/out.gff3 Mon Nov 15 17:53:24 2021 +0000 @@ -0,0 +1,418 @@ +##gff-version 3 +##feature-ontology http://song.cvs.sourceforge.net/viewvc/song/ontology/sofa.obo?revision=1.269 +##interproscan-version 5.52-86.0 +##sequence-region FUN_000011-T1 1 923 +FUN_000011-T1 . polypeptide 1 923 . + . ID=FUN_000011-T1;md5=ea9924e11f7decc417e8d9ed8b9c682e +FUN_000011-T1 MobiDBLite protein_match 49 74 . + . date=09-11-2021;Target=FUN_000011-T1 49 74;ID=match$1_49_74;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000011-T1 MobiDBLite protein_match 1 74 . + . date=09-11-2021;Target=FUN_000011-T1 1 74;ID=match$2_1_74;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000011-T1 MobiDBLite protein_match 1 18 . + . date=09-11-2021;Target=FUN_000011-T1 1 18;ID=match$3_1_18;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000011-T1 MobiDBLite protein_match 770 789 . + . date=09-11-2021;Target=FUN_000011-T1 770 789;ID=match$4_770_789;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000011-T1 MobiDBLite protein_match 771 789 . + . date=09-11-2021;Target=FUN_000011-T1 771 789;ID=match$5_771_789;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000011-T1 MobiDBLite protein_match 188 259 . + . date=09-11-2021;Target=FUN_000011-T1 188 259;ID=match$6_188_259;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000011-T1 MobiDBLite protein_match 20 46 . + . date=09-11-2021;Target=FUN_000011-T1 20 46;ID=match$7_20_46;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +##sequence-region FUN_000012-T1 1 3977 +FUN_000012-T1 . polypeptide 1 3977 . + . ID=FUN_000012-T1;md5=01beedc2fbf8012cba37f0c0d39aa071 +FUN_000012-T1 MobiDBLite protein_match 2637 2661 . + . date=09-11-2021;Target=FUN_000012-T1 2637 2661;ID=match$8_2637_2661;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 520 541 . + . date=09-11-2021;Target=FUN_000012-T1 520 541;ID=match$9_520_541;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 2396 2471 . + . date=09-11-2021;Target=FUN_000012-T1 2396 2471;ID=match$10_2396_2471;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 1762 1784 . + . date=09-11-2021;Target=FUN_000012-T1 1762 1784;ID=match$11_1762_1784;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 1520 1558 . + . date=09-11-2021;Target=FUN_000012-T1 1520 1558;ID=match$12_1520_1558;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 3633 3682 . + . date=09-11-2021;Target=FUN_000012-T1 3633 3682;ID=match$13_3633_3682;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 3502 3704 . + . date=09-11-2021;Target=FUN_000012-T1 3502 3704;ID=match$14_3502_3704;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 2538 2562 . + . date=09-11-2021;Target=FUN_000012-T1 2538 2562;ID=match$15_2538_2562;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 3537 3551 . + . date=09-11-2021;Target=FUN_000012-T1 3537 3551;ID=match$16_3537_3551;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 2753 2799 . + . date=09-11-2021;Target=FUN_000012-T1 2753 2799;ID=match$17_2753_2799;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 3133 3158 . + . date=09-11-2021;Target=FUN_000012-T1 3133 3158;ID=match$18_3133_3158;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 2423 2442 . + . date=09-11-2021;Target=FUN_000012-T1 2423 2442;ID=match$19_2423_2442;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 1483 1502 . + . date=09-11-2021;Target=FUN_000012-T1 1483 1502;ID=match$20_1483_1502;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 1762 1787 . + . date=09-11-2021;Target=FUN_000012-T1 1762 1787;ID=match$21_1762_1787;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 2235 2261 . + . date=09-11-2021;Target=FUN_000012-T1 2235 2261;ID=match$22_2235_2261;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 3324 3375 . + . date=09-11-2021;Target=FUN_000012-T1 3324 3375;ID=match$23_3324_3375;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 2590 2630 . + . date=09-11-2021;Target=FUN_000012-T1 2590 2630;ID=match$24_2590_2630;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 2679 2705 . + . date=09-11-2021;Target=FUN_000012-T1 2679 2705;ID=match$25_2679_2705;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 1086 1105 . + . date=09-11-2021;Target=FUN_000012-T1 1086 1105;ID=match$26_1086_1105;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 3816 3830 . + . date=09-11-2021;Target=FUN_000012-T1 3816 3830;ID=match$27_3816_3830;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 2152 2318 . + . date=09-11-2021;Target=FUN_000012-T1 2152 2318;ID=match$28_2152_2318;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 3504 3532 . + . date=09-11-2021;Target=FUN_000012-T1 3504 3532;ID=match$29_3504_3532;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 2152 2200 . + . date=09-11-2021;Target=FUN_000012-T1 2152 2200;ID=match$30_2152_2200;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 912 931 . + . date=09-11-2021;Target=FUN_000012-T1 912 931;ID=match$31_912_931;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 1527 1541 . + . date=09-11-2021;Target=FUN_000012-T1 1527 1541;ID=match$32_1527_1541;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 1090 1105 . + . date=09-11-2021;Target=FUN_000012-T1 1090 1105;ID=match$33_1090_1105;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 559 581 . + . date=09-11-2021;Target=FUN_000012-T1 559 581;ID=match$34_559_581;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 3426 3463 . + . date=09-11-2021;Target=FUN_000012-T1 3426 3463;ID=match$35_3426_3463;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 1362 1410 . + . date=09-11-2021;Target=FUN_000012-T1 1362 1410;ID=match$36_1362_1410;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 3812 3938 . + . date=09-11-2021;Target=FUN_000012-T1 3812 3938;ID=match$37_3812_3938;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 1920 2025 . + . date=09-11-2021;Target=FUN_000012-T1 1920 2025;ID=match$38_1920_2025;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 836 859 . + . date=09-11-2021;Target=FUN_000012-T1 836 859;ID=match$39_836_859;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 3429 3449 . + . date=09-11-2021;Target=FUN_000012-T1 3429 3449;ID=match$40_3429_3449;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 3552 3583 . + . date=09-11-2021;Target=FUN_000012-T1 3552 3583;ID=match$41_3552_3583;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 2492 2531 . + . date=09-11-2021;Target=FUN_000012-T1 2492 2531;ID=match$42_2492_2531;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 1920 1945 . + . date=09-11-2021;Target=FUN_000012-T1 1920 1945;ID=match$43_1920_1945;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 915 931 . + . date=09-11-2021;Target=FUN_000012-T1 915 931;ID=match$44_915_931;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 2757 2773 . + . date=09-11-2021;Target=FUN_000012-T1 2757 2773;ID=match$45_2757_2773;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 3213 3252 . + . date=09-11-2021;Target=FUN_000012-T1 3213 3252;ID=match$46_3213_3252;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 3345 3371 . + . date=09-11-2021;Target=FUN_000012-T1 3345 3371;ID=match$47_3345_3371;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 3718 3778 . + . date=09-11-2021;Target=FUN_000012-T1 3718 3778;ID=match$48_3718_3778;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 3596 3621 . + . date=09-11-2021;Target=FUN_000012-T1 3596 3621;ID=match$49_3596_3621;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 2095 2134 . + . date=09-11-2021;Target=FUN_000012-T1 2095 2134;ID=match$50_2095_2134;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 486 508 . + . date=09-11-2021;Target=FUN_000012-T1 486 508;ID=match$51_486_508;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 447 467 . + . date=09-11-2021;Target=FUN_000012-T1 447 467;ID=match$52_447_467;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 3040 3060 . + . date=09-11-2021;Target=FUN_000012-T1 3040 3060;ID=match$53_3040_3060;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 542 558 . + . date=09-11-2021;Target=FUN_000012-T1 542 558;ID=match$54_542_558;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 1947 2024 . + . date=09-11-2021;Target=FUN_000012-T1 1947 2024;ID=match$55_1947_2024;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 520 581 . + . date=09-11-2021;Target=FUN_000012-T1 520 581;ID=match$56_520_581;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 2398 2422 . + . date=09-11-2021;Target=FUN_000012-T1 2398 2422;ID=match$57_2398_2422;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 2774 2799 . + . date=09-11-2021;Target=FUN_000012-T1 2774 2799;ID=match$58_2774_2799;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 49 68 . + . date=09-11-2021;Target=FUN_000012-T1 49 68;ID=match$59_49_68;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 3910 3929 . + . date=09-11-2021;Target=FUN_000012-T1 3910 3929;ID=match$60_3910_3929;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 2488 2710 . + . date=09-11-2021;Target=FUN_000012-T1 2488 2710;ID=match$61_2488_2710;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1 MobiDBLite protein_match 2211 2234 . + . date=09-11-2021;Target=FUN_000012-T1 2211 2234;ID=match$62_2211_2234;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +##sequence-region FUN_000008-T1 1 396 +FUN_000008-T1 . polypeptide 1 396 . + . ID=FUN_000008-T1;md5=85417aa859c7206bc79b01bf4d7e605e +FUN_000008-T1 MobiDBLite protein_match 326 352 . + . date=09-11-2021;Target=FUN_000008-T1 326 352;ID=match$63_326_352;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000008-T1 MobiDBLite protein_match 160 194 . + . date=09-11-2021;Target=FUN_000008-T1 160 194;ID=match$64_160_194;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000008-T1 MobiDBLite protein_match 215 238 . + . date=09-11-2021;Target=FUN_000008-T1 215 238;ID=match$65_215_238;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000008-T1 MobiDBLite protein_match 215 396 . + . date=09-11-2021;Target=FUN_000008-T1 215 396;ID=match$66_215_396;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +##sequence-region FUN_000009-T1 1 130 +FUN_000009-T1 . polypeptide 1 130 . + . ID=FUN_000009-T1;md5=275f31fdcd1e48bab0e9176407572897 +FUN_000009-T1 MobiDBLite protein_match 33 61 . + . date=09-11-2021;Target=FUN_000009-T1 33 61;ID=match$67_33_61;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +##sequence-region FUN_000005-T1 1 662 +FUN_000005-T1 . polypeptide 1 662 . + . ID=FUN_000005-T1;md5=43d29b4b17225ce880c77b3dbac06f82 +FUN_000005-T1 MobiDBLite protein_match 47 112 . + . date=09-11-2021;Target=FUN_000005-T1 47 112;ID=match$68_47_112;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000005-T1 MobiDBLite protein_match 39 123 . + . date=09-11-2021;Target=FUN_000005-T1 39 123;ID=match$69_39_123;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +##sequence-region FUN_000016-T1 1 478 +FUN_000016-T1 . polypeptide 1 478 . + . ID=FUN_000016-T1;md5=805cdbb649e54f1527088be8a18adb3d +FUN_000016-T1 MobiDBLite protein_match 299 331 . + . date=09-11-2021;Target=FUN_000016-T1 299 331;ID=match$70_299_331;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +##sequence-region FUN_000017-T1 1 124 +FUN_000017-T1 . polypeptide 1 124 . + . ID=FUN_000017-T1;md5=5f92e26b5d87a35b1b6c91cf1c65ceb4 +FUN_000017-T1 MobiDBLite protein_match 54 76 . + . date=09-11-2021;Target=FUN_000017-T1 54 76;ID=match$71_54_76;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000017-T1 MobiDBLite protein_match 54 73 . + . date=09-11-2021;Target=FUN_000017-T1 54 73;ID=match$72_54_73;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +##sequence-region FUN_000018-T1 1 431 +FUN_000018-T1 . polypeptide 1 431 . + . ID=FUN_000018-T1;md5=5ca2cbf7936c8539c0f5b069cce1b285 +FUN_000018-T1 MobiDBLite protein_match 1 25 . + . date=09-11-2021;Target=FUN_000018-T1 1 25;ID=match$73_1_25;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000018-T1 MobiDBLite protein_match 375 431 . + . date=09-11-2021;Target=FUN_000018-T1 375 431;ID=match$74_375_431;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000018-T1 MobiDBLite protein_match 1 16 . + . date=09-11-2021;Target=FUN_000018-T1 1 16;ID=match$75_1_16;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +##sequence-region FUN_000013-T1 1 576 +FUN_000013-T1 . polypeptide 1 576 . + . ID=FUN_000013-T1;md5=039e9dcd47be3a3db8b02494ffde402e +FUN_000013-T1 MobiDBLite protein_match 15 31 . + . date=09-11-2021;Target=FUN_000013-T1 15 31;ID=match$76_15_31;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000013-T1 MobiDBLite protein_match 1 31 . + . date=09-11-2021;Target=FUN_000013-T1 1 31;ID=match$77_1_31;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +##FASTA +>FUN_000005-T1 +MSFCDFLRDAALGANSANLSIVAAALSAARDVGGGSDGGGSAGGATPATGASASSVGNTS +AVGASSSSNSSAGQAASSNSNNVTATGSGSAPGGGPTSTGTTSGTQHGSGSGAAAAVDSE +SDDSEVGRLQALLEARGLPPHLFGALGPRVTHILHRTIGNSSSSKANQLLQGLQSHDESQ +QLQAAIEMCQMLVMGNEDTLAGFPIKQVVPALIQLLRMEHNFDIMNNACRALAYMLEALP +RSSGTVVEAVPVFLEKLQVIQCMDVAEQSLSALEILSRRHNKAILQANGISACLTYLDFF +SIVAQRAALAIAANCCLNMHPEEFHFVAESLPLLARLLSQQDKKCIESVCSAFCRLVESF +QHDGQRLQQIASPDLLKNCQQLLLVTPAILNTGTFTAVVRMLSLMCCSCPDLAISLLRND +IAATLLYLLTGNAEPAAASATHVELISRSPSELYELTCLIGELMPRLPLDGIFAVDSLLD +RPTLNTQDQVHWQWRDDRGSWHNYSTIDSRLIEAANQSSEDEISLSTFGRTYTVDFHAMQ +QINEDTGTTRPVQRRLNHNYVAPMSAGQDLTTTSAGSAAAGGASTSAAAAAASSNNNNNN +NNNPPGNSVNLNQVKRRPSLDARIACLKVRNKMFCLFTRYTLKLNNLPNYNVFFMKYFRR +HS +>FUN_000008-T1 +MKTLSVRLHRGTEFIKDTVHKALVMSAPTPVAPATAPAPKIVDHSLKRKLSGAGGLMGCS +SIGSMTSSIAGSSRSHHYALTSQVASSQVIPLPSQVPTAAFLRTYTVAPTALHRSAAARK +RNPSTDSLLMDLCLFKPIRPMPITPIKIHKFRGFEVKKPKFVPAGNPDSEDDEDNDEDGT +VRKPKPSNLTLPTISDSAFVPMPYIETTNTAINATTTTNSGSRSRSLNTHTSGSAQAITK +PKRRRRAPMLTAKRRRKALDTELTTSADAGTEDKAPAVRKATAARGGSKRSRGESITAPT +PAEPIKSPVAIKAPTKRKSTSRSEAAKRSRVASVQNDTVLTATSTTSADSIRKAATKRIA +ANEKVAKRSRGSAALSARPSPPMTRQRARQQISAST +>FUN_000009-T1 +MVTLRLPWCIRHKPPLCRIGLSHGCECDNSKKMAASSHAPESDRRAQRLRTQSNWNPPDH +SALSLGKLVSRKLTPTAVGHWVVGRQRAACACAGGPNADWTDGQPIESSRGCIFQPAPHC +HGGRIARHFG +>FUN_000011-T1 +MEVDLDESIKEAAPEKKVHSITRSSPSPKRAKNSSPEPPKPKSTKSKATTPRVKKEKPAA +DLESSVLTDEERHERKRASAVLYQKYKNRSSCLNPGSKEIPKGSPDCLSGLTFVVTGVLE +SMEREEAESVIKEYGGKVMTVVGKKLKYLVVGEEAGPKKLAVAEELNIPILSEDGLFDLI +REKSGIAKQVKEEKKSPKKEHSSEEKGKKEVKTSRRSSDKKEKEATKLKYGEKHDIAKHK +VKEEHTSPKETKDKLNDVPAVTLKVKKEPSSQKEHPPSPRTADLKTLDVVGMAWVDKHKP +TSIKEIPQRPNPWAKNDDGSFYKAALLSGPPGIGKTTTATLVVKELGFDAVEFNASDTRS +KRLLKDEVSTLLSNKSLSGYFTGQGQAVSRKHVLIMDEVDGMAGNEDRGGMQELIALIKD +SSIPIICMCNDRNHPKIRSLVNYCYDLRFQRPRLEQIKGKIMSICFKEKVKISPAKVEEI +IAATNNDIRQSINHIALLSAKEDASQKSGQQVATKDLKLGPWEVVRKVFTADEHKHMSFA +DKSDLFFHDYSLAPLFVQQNYLQVLPQGNKKDVLAKVAATADALSLGDLVEKRIRANSAW +SLLPTQAFFSSVLPGEHMCGHFTGQINFPGWLGKNSKSGKRARLAQELHDHTRVCTSGSR +LSVRLDYAPFLLDNIVRPLAKDGQEGVPAALDVMKDYHLLREDLDSLVELTSWPGKKSPL +DAVDGRVKAALTRSYNKEVMAYSYSAQAGIKKKKSEAAGADDDYLDEGPGEEDGAGGHLS +SEEDEDKDNLELDSLIKAKKRTTTSKASDSDSLPHPLPKHPPHCCCCWARPGQSQGHSQP +PSSRIHAHAREPGFCAPLPFPFPLRSVNRCRALYRYFACLRRASCCVFWLHMFTFQHSPK +RHCSECESIQGSSGGSVVNEGFE +>FUN_000012-T1 +MSLADMGTASRSAGGEGGRHYDLATGGAGSGGHPVGGGLPGGRMTHSLSTPSGVDGTPST +PRHRGGKKLTVRIQMLDDSITMFQVQAKALGRVLFEQVCRQLNLLEADYFGLEYQEVSTH +TKYWLDLEKPMNRQVGLSLIDPVLRFCIKFYTPDPAQLEEEYTRYLFCLQIKRDLATGSL +QCNDNTAALMASYIVQASCGDFVPEDYPDHTYLSSYRFVPNQDATMQRKIMENHKKHVGQ +SPAEADLNLLETARRCELYGMKMHPAKDVEGVPLNLAVAHMGITVFQNITRINTFSWAKI +RKISFKRKRFLVKLHPEGYGYYKDTVEFFFEGRNECKNFWKKCVENHGFFRCTAVQNTPR +RKTRVLSRGSSFRYSGKTQKQIIEFVRENYVKRQNFQRSQSFRQGPLNASSRSQSHTYVN +SSISANPLLPIDTAAWDYRNQCSDSMTPSLTKKAADTLDRRRDNPIGHMRSQVTAAQVEI +YQTKNYAADSPTSQEEAECSAAGAERQHHSAVAMDKLNSNRSLSPQGPQSWTSPSHSSHH +QQRGPDPARVHPGDHNTAHQHQHAQQQHQPQHYAQHQHSGSFGGSQQLYGVGGGGGGSGN +CGHGGGGGGACGGGGGGGISRGGSGFGLDGIYHQSGDYGGSLSGGSIGLGFGLGLGQCPS +SAASVTGVPCMLNNANANSTETETDNIIYTDINDMGHYKYPDFHSSAHQEHKISNSEHLN +LNERNDIYATVNRKAKSKIREKHFSDEFIDQSILQYTRAKQMGLSQVPVLLQQPSTSAYA +AALQERSYNSGSYQYHNDLNHPSESSSSSYFGTGFGTKRYGQSERTKLAQSENYLTPSLD +SQSSRHTHSLPRNSELSGVDSVDSYDSHYITHHSVGILPPGHLSSSSEKLDFQLPSGNLY +STTQFVKPEDASAHYMEDEEEEEEDEGENIYDQVERDSWLKSSSCKDLFERYSSTYYDRE +HSKPMTAFDKEFLSSNRIDSPVTRYDDSRHSLYVAKNHSIDAHQGFSPLPQSKVYSSSYP +GSTYNTQEHKRQHGHHMDYSGSQDDISQDSYELLEKYDIDFFGGRGRSEDHMRSCSLDSG +NYIPSDDESVSEGHQQHKYRSEMDVKSKSAADIMNEIWDAEDPRYLPREKLSVKSDGNFY +KKIQEALISAFRRRSDSENIFSFDQDRIECIQKYTKQWEGQQPKDEKSKQSPEYPLTPEL +VSEFEKQQARLMAHQKITRKEELIAKTHFEEYNPIMVPLNYSSHATVERTKSDPNSLANR +ARLGSNSRRHVLMHQKSIDLTPADSNSSDEDYIYKQIPSAPPLCKAHGNFEIPKCYDGSA +ASQIAQELPKTGFELPKSFFRDYERRFTKVLKEDIPYVLHKRHIMNGTAPSPSEKKHTKP +KSPKSPKSPKSPKSPKSPKSPKASSGGLGPGSTDFLPDILDSLLPSDTKEFLFTQNIDLS +KVDPITLEIDKTIPTIHLSSPKRDITKQMDASTLEKLNKKLSQIESDSATSSRTESMQQQ +KLEQKQMELIQSLRKELQANARKANKPRVIPKTKSAGKSKKGKTRITSFSSDDESLDSDD +VFGSAEAIPDRLEFSPPQSRKEIESILRIEQSRLISAAWGRGQTMSSTEIEGSPPQCRRL +ADLESRYHTQKLDPQYANATELRRISERSISIPSSEDEPHMPMRGRIDECTNDYQRNENI +PSPILEHAEFFRSNDDIYETCHEERITGSDIDYTLKKQTSSGSKSKVKLIEEIIDSSIVM +RSKGHAPILFAHARLNLSEGSVSLQRQKATQQQSPTTERRTKSLDTPVISLHRLPPMNAF +SSKDDTVGFEEEAEILEEKSLERENQATAQDEDTADSIHSCAGSIPTQSSYQTNGRDSLL +SAVSIDTEEAELLNQLRYIEKIALQGVKIKDKKKSKMKLRSGDHLILNIPKYRFTDWSPY +SSANSSRKTSPGVSRASSIESTGKGKLKTSEPYKGKPVSRSRPESRRTSADDIKARDGRG +SKKSSPKERPRSIEMRRLSKDKSKSQEETEADIAKRKERQQKLYESAMKQTITMLSPVKD +TLPAFPAPGDKILVKTDGDKIIIETEFKSKAEDHVLIAKSPRKLDNSLVKFSRSFDEGRS +PDKLDKANRSFEDRNKSFEDSEKSDAPEDMLIKSPKKIAKAQELKQKIEGSVVHKKIDGK +SSSLERPAEHHYLGPDVKARSLDDKRQATEAAKKNEEKPAPVVRSAIGDQRRSLEILKRS +LPSEDARDSEGAFSRKPSTAESLDSYVSVDESHSAASKSPVPGTGGGTEGYPHRVPTIEC +EEPSIEEDENSSERRHLKVGGQDTNRLSLDRSRSDETGSWMTVECDEFIGSDTSDNEPRT +LEPDRNVLETQATLEDANPLEYSNCATPTSDLNILLTPPNASPQIEKSVLETFEKYTGSS +DTGKKKNTLDKQSDRSKSSDSWTSGEKDTSPQRQQDWSLSVGKEKSSVEEESSVSCSIAR +PLGISQDFGKEEARKCQELKQRMLQLEVGKEEITPTPSNEQTPTNEPKILVSKKPSTPTL +EKQSPIDLGTSTESYLEPIEERIAKILDRGGARTEDSESSSGGSRKPPRIEKPARANAGK +KLSVTRADAGKSGSDRSSQESKSSFDSKGSLSVESRGSFETESSSGSLGAAQRRGELAQK +EQQSTWRPFPIESSNSSSTDDPWHHVETDGGYERYDAQNPLRDSSDSDVKEASPDDQKDA +SDASYQDELNDFPATFGYPAMTSSLGGIGVNPTDIIGYSTGFTLGRTLSRISERSTASEK +SSMEDDVSKASTHSVSMRDESVGSTDHQPSLSSDSRSNTNLAYISDADRRTSAEMPEIPC +DSATGDRLSSFGSLNEPKSPTLVTGRFSVTHVDEQQGDDVERHTLMCLSNAGSQDSEDWP +LPEIPFDHVPVKPADSLYAMPDLDKPVPKSFCWKASLSFQQSQDSLDWPSPPSSAIGAPI +IVENIETYYASEVQSADKVILDEEMAVGPPDVAKVLPYEDTAYLMSAAFDDNDFGNEQLQ +PDTVSCLSSTLSAASCLSSSLNVSCTTSSTQATARALRKNSSPEVIVAQPTRSPAPRSPL +SEDELFSSDDVFMPGTIKVQLSPDAQLRKLSKGSNNSDTSIDDILSGSTTYLEDQTTVRK +NYEARLSSGGGGASCKKCSHSSHSEEETSSLGTDLDGTVRMGGLQQKKCTHSSHSEDTSI +GLSISEWSTGTNTVRQYANLSGSDSLSAVSTHSCAKSEKSNQTKSSISSINKSAESLNEQ +SGGSSFSHKFSGDNGSSDGLRYDMLSNSETDKLSEATSATRSDDTTLTLTEMAHTISEWS +TSSSRTLVGVAPGEYLPLKQALSGNKTSLSSPSEEKRCALPQVHRRSGSNGNQARAAQEH +ADSQTGPETSAAARKRRSLEMMSKLYQSQEICSESESPFVERLYAHSEKLTERYQSQEFV +PLHGGPPASHLASSTTSQIQTQQPQQVRQKPRAPQPPTKPKPAVTRPIMQALLNKMKQPG +LAEQAAEAAEAEEKKAMIAASAVAAKPPPPPVPTVPPIVTPSDLPGDAVAPPPKPLAKHH +SYDDRTLSKTQIREFKTTSKQLRQSSSFHEHMLSKSQQSSQELPMRIDEERDPHSTSSAT +NTTTTTNTLNSESTEPNSPQMPQRADKLVRCSPYYSSSLSSESPPNQLLQKPPRKTATQL +SAGAVAASLKSPPSGNDTDSSLDVRGQEAKMRSRGYRKKRQLPVKRMRANLTAAALLEQA +ESSECSEGYVPEVDSGSSEYSSCQRDDQYLEFDEELERDQTDDYEDYPQYSGKFESLDMS +DNVDEMGFPRYDRLSHITKPMYHQALVMERPNPVQLPAPANHPMPPATGQPVKPARTKKR +QFKREDSTAAGTSGHSTAAPQVRPYHGRSYCNPEESEYETRGGGLSDELANSSEDSCSGF +GGDAGASGSGTIRRGTTKGAGQDQEQGTGGQARHVPYPDFLSDYESEPIEYERYACGLDI +RVDPPPKFHDSDELSDQ +>FUN_000013-T1 +MSLDRRGEITTPPTRYDLTLGSDKSSSLSRSEAGTYDVIQAEIQHAKRQELATGVATASH +QNGNGNGNGHTLSTQHDIEAEVKKRKWPTEPSYFLAKELLMTERTYKKDLDVLNTTFRQV +LSLGDVEQLQPLFELLDSLAQHHNLFLRDIEHRMVQWEGRGGHEAHRIGDVMMKHMAALP +IYDEYVQTHLDILHCMNDMYEGDERFRQVYKEFEQQKVCYLPIGELLLKPLNRLLHYQLI +LERLCDYYGEEHIDYADAMAVHHLLVRSTKGIRSQLPDSANFVELCELQRDINFEQLVQP +HRRLIRQGCLLKHSKRGLQQRMFFLFSDLLLYGSKSPLDQSFRILGHVPVRSLLTENAEH +NTFSIFGGQCAITVSAGTTAEKTLWLAELSKAAADIKNRPPNMQLQLTTLKNCSSSEEGL +DLFGLSNGNNSSLNSSVNGGGPLTTQQQKLQLQQQQQNRTQPSRSNTALHVCWHRGATVG +LGDHLIAAEHQLSGYLLRKFKNSSGWQKLWVVFTSFCLYFYKSYQDEFALASLPLLGYTV +GPPGHQDAVQKEFVFKLSFKNHVYFFRAESAHTYNR +>FUN_000016-T1 +MASKSFDLVIEEKTKKPERLYQPRRMRWLKYIILPAVFSFALLLILVNVDFSDNSEDSTH +LGNDTSLIISGYGFENNTLRRGFFSGGIALHSLVIENCTIVHINDAAFNQESTVNITSLQ +LINVQLENLTESALEGLQKLQNFTLVNENNHFRPFGFLSAVAESLVSAEIHQSLAAAISY +SVCDFLGSRNFPQLKYLDLSGTHLDKSLIKESFDNLPALEQLLLRNCGLGNIEWEIVRPR +LKLLHYLDLGGAQKTGNYEHQLDVSAFSPETTTNAEEISTILAKRAMAPEVVGTTTLGPT +TSIEISPPSTQSTTTPKEESTSMTETTILTTPSPKCEEELCQDLECSRITTDTVASADLG +KSSCQDGLLVEICESTCTTPTFFCVILGENFTSASNCCSHHTMRCVVSAQVSWFEDHSGL +VIGLGVGLLFIGSFLGMLIVFGTLRLNPSWLRGNKRRESNTIGLIQGRFEKDPYEQVG +>FUN_000017-T1 +MSSFLLVIFILLALRTSESSETGNPLANEPDPLYMKLVDPMVAGESPKRMIKDQKDVGLK +STSSSEELRKLPKTRGRQKRFIRNPNYVKANEFYDKMLSSEYVSKRYKDLPPPHPGFGAD +QPPA +>FUN_000018-T1 +MPPTINNSAVNSAAEKRPQRQTERKSEIICRVKYGNNLPDIPFDLKFLQYPFDSHRFVQY +NPTSLERNFKYDVLTEHDLGVTVDLINRELYQADSMTLLDPADEKLLEEETLTPTDSVRS +RQHSRTVSWLRKSEYISTEQTRFQPQNLENIEAKVGYNVKKSLREETLYLDREAQIKAIE +KTFSDTKSEITKHYSKPNVVPVEVLPIFPDFTNWKFPCAQVIFDSDPAPAGKNVPAQLEE +MSQAMIRGVMDESGEQFVAYFLPTEQTLEKRRTDFINGELYKEEEEYEYKIAREYNWNVK +TKASKGYEENYFFVMRQDGIYYNELETRVRLNKRRVKVGQQPNNTKLVVKHRPLDSMEHR +MQRYRERQLEVPGEEEEIVEEVREEEQMQIIGETEKTSEDAAVGAQAASGADSPAQVARD +RQSRSRSRTRS +>match$1_49_74 +TTPRVKKEKPAADLESSVLTDEERHE +>match$2_1_74 +MEVDLDESIKEAAPEKKVHSITRSSPSPKRAKNSSPEPPKPKSTKSKATTPRVKKEKPAA +DLESSVLTDEERHE +>match$3_1_18 +MEVDLDESIKEAAPEKKV +>match$4_770_789 +GEEDGAGGHLSSEEDEDKDN +>match$5_771_789 +EEDGAGGHLSSEEDEDKDN +>match$6_188_259 +KQVKEEKKSPKKEHSSEEKGKKEVKTSRRSSDKKEKEATKLKYGEKHDIAKHKVKEEHTS +PKETKDKLNDVP +>match$7_20_46 +SITRSSPSPKRAKNSSPEPPKPKSTKS +>match$8_2637_2661 +LAQKEQQSTWRPFPIESSNSSSTDD +>match$9_520_541 +NRSLSPQGPQSWTSPSHSSHHQ +>match$10_2396_2471 +YTGSSDTGKKKNTLDKQSDRSKSSDSWTSGEKDTSPQRQQDWSLSVGKEKSSVEEESSVS +CSIARPLGISQDFGKE +>match$11_1762_1784 +VSLQRQKATQQQSPTTERRTKSL +>match$12_1520_1558 +NARKANKPRVIPKTKSAGKSKKGKTRITSFSSDDESLDS +>match$13_3633_3682 +PYYSSSLSSESPPNQLLQKPPRKTATQLSAGAVAASLKSPPSGNDTDSSL +>match$14_3502_3704 +AVAAKPPPPPVPTVPPIVTPSDLPGDAVAPPPKPLAKHHSYDDRTLSKTQIREFKTTSKQ +LRQSSSFHEHMLSKSQQSSQELPMRIDEERDPHSTSSATNTTTTTNTLNSESTEPNSPQM +PQRADKLVRCSPYYSSSLSSESPPNQLLQKPPRKTATQLSAGAVAASLKSPPSGNDTDSS +LDVRGQEAKMRSRGYRKKRQLPV +>match$15_2538_2562 +PIEERIAKILDRGGARTEDSESSSG +>match$16_3537_3551 +AKHHSYDDRTLSKTQ +>match$17_2753_2799 +ERSTASEKSSMEDDVSKASTHSVSMRDESVGSTDHQPSLSSDSRSNT +>match$18_3133_3158 +ASCKKCSHSSHSEEETSSLGTDLDGT +>match$19_2423_2442 +TSGEKDTSPQRQQDWSLSVG +>match$20_1483_1502 +QIESDSATSSRTESMQQQKL +>match$21_1762_1787 +VSLQRQKATQQQSPTTERRTKSLDTP +>match$22_2235_2261 +RKPSTAESLDSYVSVDESHSAASKSPV +>match$23_3324_3375 +GNKTSLSSPSEEKRCALPQVHRRSGSNGNQARAAQEHADSQTGPETSAAARK +>match$24_2590_2630 +GKSGSDRSSQESKSSFDSKGSLSVESRGSFETESSSGSLGA +>match$25_2679_2705 +NPLRDSSDSDVKEASPDDQKDASDASY +>match$26_1086_1105 +DDESVSEGHQQHKYRSEMDV +>match$27_3816_3830 +LPAPANHPMPPATGQ +>match$28_2152_2318 +VVHKKIDGKSSSLERPAEHHYLGPDVKARSLDDKRQATEAAKKNEEKPAPVVRSAIGDQR +RSLEILKRSLPSEDARDSEGAFSRKPSTAESLDSYVSVDESHSAASKSPVPGTGGGTEGY +PHRVPTIECEEPSIEEDENSSERRHLKVGGQDTNRLSLDRSRSDETG +>match$29_3504_3532 +AAKPPPPPVPTVPPIVTPSDLPGDAVAPP +>match$30_2152_2200 +VVHKKIDGKSSSLERPAEHHYLGPDVKARSLDDKRQATEAAKKNEEKPA +>match$31_912_931 +SAHYMEDEEEEEEDEGENIY +>match$32_1527_1541 +PRVIPKTKSAGKSKK +>match$33_1090_1105 +VSEGHQQHKYRSEMDV +>match$34_559_581 +HQHQHAQQQHQPQHYAQHQHSGS +>match$35_3426_3463 +PPASHLASSTTSQIQTQQPQQVRQKPRAPQPPTKPKPA +>match$36_1362_1410 +RHIMNGTAPSPSEKKHTKPKSPKSPKSPKSPKSPKSPKSPKASSGGLGP +>match$37_3812_3938 +NPVQLPAPANHPMPPATGQPVKPARTKKRQFKREDSTAAGTSGHSTAAPQVRPYHGRSYC +NPEESEYETRGGGLSDELANSSEDSCSGFGGDAGASGSGTIRRGTTKGAGQDQEQGTGGQ +ARHVPYP +>match$38_1920_2025 +YSSANSSRKTSPGVSRASSIESTGKGKLKTSEPYKGKPVSRSRPESRRTSADDIKARDGR +GSKKSSPKERPRSIEMRRLSKDKSKSQEETEADIAKRKERQQKLYE +>match$39_836_859 +TPSLDSQSSRHTHSLPRNSELSGV +>match$40_3429_3449 +SHLASSTTSQIQTQQPQQVRQ +>match$41_3552_3583 +IREFKTTSKQLRQSSSFHEHMLSKSQQSSQEL +>match$42_2492_2531 +EITPTPSNEQTPTNEPKILVSKKPSTPTLEKQSPIDLGTS +>match$43_1920_1945 +YSSANSSRKTSPGVSRASSIESTGKG +>match$44_915_931 +YMEDEEEEEEDEGENIY +>match$45_2757_2773 +ASEKSSMEDDVSKASTH +>match$46_3213_3252 +SCAKSEKSNQTKSSISSINKSAESLNEQSGGSSFSHKFSG +>match$47_3345_3371 +RRSGSNGNQARAAQEHADSQTGPETSA +>match$48_3718_3778 +EQAESSECSEGYVPEVDSGSSEYSSCQRDDQYLEFDEELERDQTDDYEDYPQYSGKFESL +D +>match$49_3596_3621 +TSSATNTTTTTNTLNSESTEPNSPQM +>match$50_2095_2134 +FDEGRSPDKLDKANRSFEDRNKSFEDSEKSDAPEDMLIKS +>match$51_486_508 +YAADSPTSQEEAECSAAGAERQH +>match$52_447_467 +TPSLTKKAADTLDRRRDNPIG +>match$53_3040_3060 +NSSPEVIVAQPTRSPAPRSPL +>match$54_542_558 +QRGPDPARVHPGDHNTA +>match$55_1947_2024 +LKTSEPYKGKPVSRSRPESRRTSADDIKARDGRGSKKSSPKERPRSIEMRRLSKDKSKSQ +EETEADIAKRKERQQKLY +>match$56_520_581 +NRSLSPQGPQSWTSPSHSSHHQQRGPDPARVHPGDHNTAHQHQHAQQQHQPQHYAQHQHS +GS +>match$57_2398_2422 +GSSDTGKKKNTLDKQSDRSKSSDSW +>match$58_2774_2799 +SVSMRDESVGSTDHQPSLSSDSRSNT +>match$59_49_68 +STPSGVDGTPSTPRHRGGKK +>match$60_3910_3929 +GTIRRGTTKGAGQDQEQGTG +>match$61_2488_2710 +VGKEEITPTPSNEQTPTNEPKILVSKKPSTPTLEKQSPIDLGTSTESYLEPIEERIAKIL +DRGGARTEDSESSSGGSRKPPRIEKPARANAGKKLSVTRADAGKSGSDRSSQESKSSFDS +KGSLSVESRGSFETESSSGSLGAAQRRGELAQKEQQSTWRPFPIESSNSSSTDDPWHHVE +TDGGYERYDAQNPLRDSSDSDVKEASPDDQKDASDASYQDELN +>match$62_2211_2234 +RRSLEILKRSLPSEDARDSEGAFS +>match$63_326_352 +AKRSRVASVQNDTVLTATSTTSADSIR +>match$64_160_194 +KFVPAGNPDSEDDEDNDEDGTVRKPKPSNLTLPTI +>match$65_215_238 +TTTTNSGSRSRSLNTHTSGSAQAI +>match$66_215_396 +TTTTNSGSRSRSLNTHTSGSAQAITKPKRRRRAPMLTAKRRRKALDTELTTSADAGTEDK +APAVRKATAARGGSKRSRGESITAPTPAEPIKSPVAIKAPTKRKSTSRSEAAKRSRVASV +QNDTVLTATSTTSADSIRKAATKRIAANEKVAKRSRGSAALSARPSPPMTRQRARQQISA +ST +>match$67_33_61 +MAASSHAPESDRRAQRLRTQSNWNPPDHS +>match$68_47_112 +PATGASASSVGNTSAVGASSSSNSSAGQAASSNSNNVTATGSGSAPGGGPTSTGTTSGTQ +HGSGSG +>match$69_39_123 +GGSAGGATPATGASASSVGNTSAVGASSSSNSSAGQAASSNSNNVTATGSGSAPGGGPTS +TGTTSGTQHGSGSGAAAAVDSESDD +>match$70_299_331 +PTTSIEISPPSTQSTTTPKEESTSMTETTILTT +>match$71_54_76 +QKDVGLKSTSSSEELRKLPKTRG +>match$72_54_73 +QKDVGLKSTSSSEELRKLPK +>match$73_1_25 +MPPTINNSAVNSAAEKRPQRQTERK +>match$74_375_431 +EEEIVEEVREEEQMQIIGETEKTSEDAAVGAQAASGADSPAQVARDRQSRSRSRTRS +>match$75_1_16 +MPPTINNSAVNSAAEK +>match$76_15_31 +RYDLTLGSDKSSSLSRS +>match$77_1_31 +MSLDRRGEITTPPTRYDLTLGSDKSSSLSRS
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/prot_out/out.json Mon Nov 15 17:53:24 2021 +0000 @@ -0,0 +1,1842 @@ +{ + "interproscan-version": "5.52-86.0", +"results": [ { + "sequence" : "MKFRALMQDPLYMKEFQAIVATLTKLAKDCVMILGSRQMHFIVNEDQSSAASPLVWAGITAEEYFPEYRMEAAHPDQEYIVLGVSSANLGRALSVLRGGGVNSCKLKLQRIQFPCISVIASVLTSSSTEAREVVHDVPVTIIPGSDWSAYVVPRVPNSQLALGLPSLRLLKSLIDKLKNISPSLEFQVNVDGELNVIATSEMSTVTSRFQKLLIRTVSGSQQEASCSVDSRKASAFFGALQLPNEELTIGIDREHSIHLQIDVRQDVVLHSILPAVCM", + "md5" : "5803f8be5816d8c362fa0a4bff18f8a3", + "matches" : [ ], + "xref" : [ { + "name" : "FUN_000006-T1 FUN_000006", + "id" : "FUN_000006-T1" + } ] +},{ + "sequence" : "MEVDLDESIKEAAPEKKVHSITRSSPSPKRAKNSSPEPPKPKSTKSKATTPRVKKEKPAADLESSVLTDEERHERKRASAVLYQKYKNRSSCLNPGSKEIPKGSPDCLSGLTFVVTGVLESMEREEAESVIKEYGGKVMTVVGKKLKYLVVGEEAGPKKLAVAEELNIPILSEDGLFDLIREKSGIAKQVKEEKKSPKKEHSSEEKGKKEVKTSRRSSDKKEKEATKLKYGEKHDIAKHKVKEEHTSPKETKDKLNDVPAVTLKVKKEPSSQKEHPPSPRTADLKTLDVVGMAWVDKHKPTSIKEIPQRPNPWAKNDDGSFYKAALLSGPPGIGKTTTATLVVKELGFDAVEFNASDTRSKRLLKDEVSTLLSNKSLSGYFTGQGQAVSRKHVLIMDEVDGMAGNEDRGGMQELIALIKDSSIPIICMCNDRNHPKIRSLVNYCYDLRFQRPRLEQIKGKIMSICFKEKVKISPAKVEEIIAATNNDIRQSINHIALLSAKEDASQKSGQQVATKDLKLGPWEVVRKVFTADEHKHMSFADKSDLFFHDYSLAPLFVQQNYLQVLPQGNKKDVLAKVAATADALSLGDLVEKRIRANSAWSLLPTQAFFSSVLPGEHMCGHFTGQINFPGWLGKNSKSGKRARLAQELHDHTRVCTSGSRLSVRLDYAPFLLDNIVRPLAKDGQEGVPAALDVMKDYHLLREDLDSLVELTSWPGKKSPLDAVDGRVKAALTRSYNKEVMAYSYSAQAGIKKKKSEAAGADDDYLDEGPGEEDGAGGHLSSEEDEDKDNLELDSLIKAKKRTTTSKASDSDSLPHPLPKHPPHCCCCWARPGQSQGHSQPPSSRIHAHAREPGFCAPLPFPFPLRSVNRCRALYRYFACLRRASCCVFWLHMFTFQHSPKRHCSECESIQGSSGGSVVNEGFE", + "md5" : "ea9924e11f7decc417e8d9ed8b9c682e", + "matches" : [ { + "signature" : { + "accession" : "mobidb-lite", + "name" : "disorder_prediction", + "description" : "consensus disorder prediction", + "signatureLibraryRelease" : { + "library" : "MOBIDB_LITE", + "version" : "2.0" + }, + "entry" : null + }, + "locations" : [ { + "start" : 49, + "end" : 74, + "location-fragments" : [ { + "start" : 49, + "end" : 74, + "dc-status" : "CONTINUOUS" + } ], + "sequence-feature" : "Polyampholyte" + } ], + "model-ac" : "mobidb-lite" + }, { + "signature" : { + "accession" : "mobidb-lite", + "name" : "disorder_prediction", + "description" : "consensus disorder prediction", + "signatureLibraryRelease" : { + "library" : "MOBIDB_LITE", + "version" : "2.0" + }, + "entry" : null + }, + "locations" : [ { + "start" : 1, + "end" : 74, + "location-fragments" : [ { + "start" : 1, + "end" : 74, + "dc-status" : "CONTINUOUS" + } ], + "sequence-feature" : "" + } ], + "model-ac" : "mobidb-lite" + }, { + "signature" : { + "accession" : "mobidb-lite", + "name" : "disorder_prediction", + "description" : "consensus disorder prediction", + "signatureLibraryRelease" : { + "library" : "MOBIDB_LITE", + "version" : "2.0" + }, + "entry" : null + }, + "locations" : [ { + "start" : 1, + "end" : 18, + "location-fragments" : [ { + "start" : 1, + "end" : 18, + "dc-status" : "CONTINUOUS" + } ], + "sequence-feature" : "Polyampholyte" + } ], + "model-ac" : "mobidb-lite" + }, { + "signature" : { + "accession" : "mobidb-lite", + "name" : "disorder_prediction", + "description" : "consensus disorder prediction", + "signatureLibraryRelease" : { + "library" : "MOBIDB_LITE", + "version" : "2.0" + }, + "entry" : null + }, + "locations" : [ { + "start" : 770, + "end" : 789, + "location-fragments" : [ { + "start" : 770, + "end" : 789, + "dc-status" : "CONTINUOUS" + } ], + "sequence-feature" : "" + } ], + "model-ac" : "mobidb-lite" + }, { + "signature" : { + "accession" : "mobidb-lite", + "name" : "disorder_prediction", + "description" : "consensus disorder prediction", + "signatureLibraryRelease" : { + "library" : "MOBIDB_LITE", + "version" : "2.0" + }, + "entry" : null + }, + "locations" : [ { + "start" : 771, + "end" : 789, + "location-fragments" : [ { + "start" : 771, + "end" : 789, + "dc-status" : "CONTINUOUS" + } ], + "sequence-feature" : "Polyampholyte" + } ], + "model-ac" : "mobidb-lite" + }, { + "signature" : { + "accession" : "mobidb-lite", + "name" : "disorder_prediction", + "description" : "consensus disorder prediction", + "signatureLibraryRelease" : { + "library" : "MOBIDB_LITE", + "version" : "2.0" + }, + "entry" : null + }, + "locations" : [ { + "start" : 188, + "end" : 259, + "location-fragments" : [ { + "start" : 188, + "end" : 259, + "dc-status" : "CONTINUOUS" + } ], + "sequence-feature" : "" + } ], + "model-ac" : "mobidb-lite" + }, { + "signature" : { + "accession" : "mobidb-lite", + "name" : "disorder_prediction", + "description" : "consensus disorder prediction", + "signatureLibraryRelease" : { + "library" : "MOBIDB_LITE", + "version" : "2.0" + }, + "entry" : null + }, + "locations" : [ { + "start" : 20, + "end" : 46, + "location-fragments" : [ { + "start" : 20, + "end" : 46, + "dc-status" : "CONTINUOUS" + } ], + "sequence-feature" : "Polar" + } ], + "model-ac" : "mobidb-lite" + } ], + "xref" : [ { + "name" : "FUN_000011-T1 FUN_000011", + "id" : "FUN_000011-T1" + } ] +},{ + "sequence" : "MSLADMGTASRSAGGEGGRHYDLATGGAGSGGHPVGGGLPGGRMTHSLSTPSGVDGTPSTPRHRGGKKLTVRIQMLDDSITMFQVQAKALGRVLFEQVCRQLNLLEADYFGLEYQEVSTHTKYWLDLEKPMNRQVGLSLIDPVLRFCIKFYTPDPAQLEEEYTRYLFCLQIKRDLATGSLQCNDNTAALMASYIVQASCGDFVPEDYPDHTYLSSYRFVPNQDATMQRKIMENHKKHVGQSPAEADLNLLETARRCELYGMKMHPAKDVEGVPLNLAVAHMGITVFQNITRINTFSWAKIRKISFKRKRFLVKLHPEGYGYYKDTVEFFFEGRNECKNFWKKCVENHGFFRCTAVQNTPRRKTRVLSRGSSFRYSGKTQKQIIEFVRENYVKRQNFQRSQSFRQGPLNASSRSQSHTYVNSSISANPLLPIDTAAWDYRNQCSDSMTPSLTKKAADTLDRRRDNPIGHMRSQVTAAQVEIYQTKNYAADSPTSQEEAECSAAGAERQHHSAVAMDKLNSNRSLSPQGPQSWTSPSHSSHHQQRGPDPARVHPGDHNTAHQHQHAQQQHQPQHYAQHQHSGSFGGSQQLYGVGGGGGGSGNCGHGGGGGGACGGGGGGGISRGGSGFGLDGIYHQSGDYGGSLSGGSIGLGFGLGLGQCPSSAASVTGVPCMLNNANANSTETETDNIIYTDINDMGHYKYPDFHSSAHQEHKISNSEHLNLNERNDIYATVNRKAKSKIREKHFSDEFIDQSILQYTRAKQMGLSQVPVLLQQPSTSAYAAALQERSYNSGSYQYHNDLNHPSESSSSSYFGTGFGTKRYGQSERTKLAQSENYLTPSLDSQSSRHTHSLPRNSELSGVDSVDSYDSHYITHHSVGILPPGHLSSSSEKLDFQLPSGNLYSTTQFVKPEDASAHYMEDEEEEEEDEGENIYDQVERDSWLKSSSCKDLFERYSSTYYDREHSKPMTAFDKEFLSSNRIDSPVTRYDDSRHSLYVAKNHSIDAHQGFSPLPQSKVYSSSYPGSTYNTQEHKRQHGHHMDYSGSQDDISQDSYELLEKYDIDFFGGRGRSEDHMRSCSLDSGNYIPSDDESVSEGHQQHKYRSEMDVKSKSAADIMNEIWDAEDPRYLPREKLSVKSDGNFYKKIQEALISAFRRRSDSENIFSFDQDRIECIQKYTKQWEGQQPKDEKSKQSPEYPLTPELVSEFEKQQARLMAHQKITRKEELIAKTHFEEYNPIMVPLNYSSHATVERTKSDPNSLANRARLGSNSRRHVLMHQKSIDLTPADSNSSDEDYIYKQIPSAPPLCKAHGNFEIPKCYDGSAASQIAQELPKTGFELPKSFFRDYERRFTKVLKEDIPYVLHKRHIMNGTAPSPSEKKHTKPKSPKSPKSPKSPKSPKSPKSPKASSGGLGPGSTDFLPDILDSLLPSDTKEFLFTQNIDLSKVDPITLEIDKTIPTIHLSSPKRDITKQMDASTLEKLNKKLSQIESDSATSSRTESMQQQKLEQKQMELIQSLRKELQANARKANKPRVIPKTKSAGKSKKGKTRITSFSSDDESLDSDDVFGSAEAIPDRLEFSPPQSRKEIESILRIEQSRLISAAWGRGQTMSSTEIEGSPPQCRRLADLESRYHTQKLDPQYANATELRRISERSISIPSSEDEPHMPMRGRIDECTNDYQRNENIPSPILEHAEFFRSNDDIYETCHEERITGSDIDYTLKKQTSSGSKSKVKLIEEIIDSSIVMRSKGHAPILFAHARLNLSEGSVSLQRQKATQQQSPTTERRTKSLDTPVISLHRLPPMNAFSSKDDTVGFEEEAEILEEKSLERENQATAQDEDTADSIHSCAGSIPTQSSYQTNGRDSLLSAVSIDTEEAELLNQLRYIEKIALQGVKIKDKKKSKMKLRSGDHLILNIPKYRFTDWSPYSSANSSRKTSPGVSRASSIESTGKGKLKTSEPYKGKPVSRSRPESRRTSADDIKARDGRGSKKSSPKERPRSIEMRRLSKDKSKSQEETEADIAKRKERQQKLYESAMKQTITMLSPVKDTLPAFPAPGDKILVKTDGDKIIIETEFKSKAEDHVLIAKSPRKLDNSLVKFSRSFDEGRSPDKLDKANRSFEDRNKSFEDSEKSDAPEDMLIKSPKKIAKAQELKQKIEGSVVHKKIDGKSSSLERPAEHHYLGPDVKARSLDDKRQATEAAKKNEEKPAPVVRSAIGDQRRSLEILKRSLPSEDARDSEGAFSRKPSTAESLDSYVSVDESHSAASKSPVPGTGGGTEGYPHRVPTIECEEPSIEEDENSSERRHLKVGGQDTNRLSLDRSRSDETGSWMTVECDEFIGSDTSDNEPRTLEPDRNVLETQATLEDANPLEYSNCATPTSDLNILLTPPNASPQIEKSVLETFEKYTGSSDTGKKKNTLDKQSDRSKSSDSWTSGEKDTSPQRQQDWSLSVGKEKSSVEEESSVSCSIARPLGISQDFGKEEARKCQELKQRMLQLEVGKEEITPTPSNEQTPTNEPKILVSKKPSTPTLEKQSPIDLGTSTESYLEPIEERIAKILDRGGARTEDSESSSGGSRKPPRIEKPARANAGKKLSVTRADAGKSGSDRSSQESKSSFDSKGSLSVESRGSFETESSSGSLGAAQRRGELAQKEQQSTWRPFPIESSNSSSTDDPWHHVETDGGYERYDAQNPLRDSSDSDVKEASPDDQKDASDASYQDELNDFPATFGYPAMTSSLGGIGVNPTDIIGYSTGFTLGRTLSRISERSTASEKSSMEDDVSKASTHSVSMRDESVGSTDHQPSLSSDSRSNTNLAYISDADRRTSAEMPEIPCDSATGDRLSSFGSLNEPKSPTLVTGRFSVTHVDEQQGDDVERHTLMCLSNAGSQDSEDWPLPEIPFDHVPVKPADSLYAMPDLDKPVPKSFCWKASLSFQQSQDSLDWPSPPSSAIGAPIIVENIETYYASEVQSADKVILDEEMAVGPPDVAKVLPYEDTAYLMSAAFDDNDFGNEQLQPDTVSCLSSTLSAASCLSSSLNVSCTTSSTQATARALRKNSSPEVIVAQPTRSPAPRSPLSEDELFSSDDVFMPGTIKVQLSPDAQLRKLSKGSNNSDTSIDDILSGSTTYLEDQTTVRKNYEARLSSGGGGASCKKCSHSSHSEEETSSLGTDLDGTVRMGGLQQKKCTHSSHSEDTSIGLSISEWSTGTNTVRQYANLSGSDSLSAVSTHSCAKSEKSNQTKSSISSINKSAESLNEQSGGSSFSHKFSGDNGSSDGLRYDMLSNSETDKLSEATSATRSDDTTLTLTEMAHTISEWSTSSSRTLVGVAPGEYLPLKQALSGNKTSLSSPSEEKRCALPQVHRRSGSNGNQARAAQEHADSQTGPETSAAARKRRSLEMMSKLYQSQEICSESESPFVERLYAHSEKLTERYQSQEFVPLHGGPPASHLASSTTSQIQTQQPQQVRQKPRAPQPPTKPKPAVTRPIMQALLNKMKQPGLAEQAAEAAEAEEKKAMIAASAVAAKPPPPPVPTVPPIVTPSDLPGDAVAPPPKPLAKHHSYDDRTLSKTQIREFKTTSKQLRQSSSFHEHMLSKSQQSSQELPMRIDEERDPHSTSSATNTTTTTNTLNSESTEPNSPQMPQRADKLVRCSPYYSSSLSSESPPNQLLQKPPRKTATQLSAGAVAASLKSPPSGNDTDSSLDVRGQEAKMRSRGYRKKRQLPVKRMRANLTAAALLEQAESSECSEGYVPEVDSGSSEYSSCQRDDQYLEFDEELERDQTDDYEDYPQYSGKFESLDMSDNVDEMGFPRYDRLSHITKPMYHQALVMERPNPVQLPAPANHPMPPATGQPVKPARTKKRQFKREDSTAAGTSGHSTAAPQVRPYHGRSYCNPEESEYETRGGGLSDELANSSEDSCSGFGGDAGASGSGTIRRGTTKGAGQDQEQGTGGQARHVPYPDFLSDYESEPIEYERYACGLDIRVDPPPKFHDSDELSDQ", + "md5" : "01beedc2fbf8012cba37f0c0d39aa071", + "matches" : [ { + "signature" : { + "accession" : "mobidb-lite", + "name" : "disorder_prediction", + "description" : "consensus disorder prediction", + "signatureLibraryRelease" : { + "library" : "MOBIDB_LITE", + "version" : "2.0" + }, + "entry" : null + }, + "locations" : [ { + "start" : 2637, + "end" : 2661, + "location-fragments" : [ { + "start" : 2637, + "end" : 2661, + "dc-status" : "CONTINUOUS" + } ], + "sequence-feature" : "Polar" + } ], + "model-ac" : "mobidb-lite" + }, { + "signature" : { + "accession" : "mobidb-lite", + "name" : "disorder_prediction", + "description" : "consensus disorder prediction", + "signatureLibraryRelease" : { + "library" : "MOBIDB_LITE", + "version" : "2.0" + }, + "entry" : null + }, + "locations" : [ { + "start" : 520, + "end" : 541, + "location-fragments" : [ { + "start" : 520, + "end" : 541, + "dc-status" : "CONTINUOUS" + } ], + "sequence-feature" : "Polar" + } ], + "model-ac" : "mobidb-lite" + }, { + "signature" : { + "accession" : "mobidb-lite", + "name" : "disorder_prediction", + "description" : "consensus disorder prediction", + "signatureLibraryRelease" : { + "library" : "MOBIDB_LITE", + "version" : "2.0" + }, + "entry" : null + }, + "locations" : [ { + "start" : 2396, + "end" : 2471, + "location-fragments" : [ { + "start" : 2396, + "end" : 2471, + "dc-status" : "CONTINUOUS" + } ], + "sequence-feature" : "" + } ], + "model-ac" : "mobidb-lite" + }, { + "signature" : { + "accession" : "mobidb-lite", + "name" : "disorder_prediction", + "description" : "consensus disorder prediction", + "signatureLibraryRelease" : { + "library" : "MOBIDB_LITE", + "version" : "2.0" + }, + "entry" : null + }, + "locations" : [ { + "start" : 1762, + "end" : 1784, + "location-fragments" : [ { + "start" : 1762, + "end" : 1784, + "dc-status" : "CONTINUOUS" + } ], + "sequence-feature" : "Polar" + } ], + "model-ac" : "mobidb-lite" + }, { + "signature" : { + "accession" : "mobidb-lite", + "name" : 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<signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="3426" end="3463"> + <location-fragments> + <mobidblite-location-fragment start="3426" end="3463" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="1362" end="1410"> + <location-fragments> + <mobidblite-location-fragment start="1362" end="1410" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="3812" end="3938"> + <location-fragments> + <mobidblite-location-fragment start="3812" end="3938" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="1920" end="2025"> + <location-fragments> + <mobidblite-location-fragment start="1920" end="2025" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="836" end="859"> + <location-fragments> + <mobidblite-location-fragment start="836" end="859" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polar" start="3429" end="3449"> + <location-fragments> + <mobidblite-location-fragment start="3429" end="3449" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polar" start="3552" end="3583"> + <location-fragments> + <mobidblite-location-fragment start="3552" end="3583" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polar" start="2492" end="2531"> + <location-fragments> + <mobidblite-location-fragment start="2492" end="2531" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polar" start="1920" end="1945"> + <location-fragments> + <mobidblite-location-fragment start="1920" end="1945" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Negative Polyelectrolyte" start="915" end="931"> + <location-fragments> + <mobidblite-location-fragment start="915" end="931" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polyampholyte" start="2757" end="2773"> + <location-fragments> + <mobidblite-location-fragment start="2757" end="2773" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="3213" end="3252"> + <location-fragments> + <mobidblite-location-fragment start="3213" end="3252" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polar" start="3345" end="3371"> + <location-fragments> + <mobidblite-location-fragment start="3345" end="3371" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="3718" end="3778"> + <location-fragments> + <mobidblite-location-fragment start="3718" end="3778" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polar" start="3596" end="3621"> + <location-fragments> + <mobidblite-location-fragment start="3596" end="3621" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="2095" end="2134"> + <location-fragments> + <mobidblite-location-fragment start="2095" end="2134" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="486" end="508"> + <location-fragments> + <mobidblite-location-fragment start="486" end="508" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="447" end="467"> + <location-fragments> + <mobidblite-location-fragment start="447" end="467" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="3040" end="3060"> + <location-fragments> + <mobidblite-location-fragment start="3040" end="3060" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polyampholyte" start="542" end="558"> + <location-fragments> + <mobidblite-location-fragment start="542" end="558" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polyampholyte" start="1947" end="2024"> + <location-fragments> + <mobidblite-location-fragment start="1947" end="2024" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="520" end="581"> + <location-fragments> + <mobidblite-location-fragment start="520" end="581" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polyampholyte" start="2398" end="2422"> + <location-fragments> + <mobidblite-location-fragment start="2398" end="2422" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polar" start="2774" end="2799"> + <location-fragments> + <mobidblite-location-fragment start="2774" end="2799" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="49" end="68"> + <location-fragments> + <mobidblite-location-fragment start="49" end="68" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polar" start="3910" end="3929"> + <location-fragments> + <mobidblite-location-fragment start="3910" end="3929" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="2488" end="2710"> + <location-fragments> + <mobidblite-location-fragment start="2488" end="2710" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polyampholyte" start="2211" end="2234"> + <location-fragments> + <mobidblite-location-fragment start="2211" end="2234" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + </matches> + </protein> + <protein> + <sequence md5="c15a8e3e490054d695c61b6fc0cabf0f">MIHSAKTTLVEWTEAMEDGNKGYQLIEKYYLDDQQKARELNIKRQLLQADIDKRRKQVVLLYDEQMTLEKNLERTACLYRSAHAERRQMVETWKSAVNQMTQREHDIQRSEIECAELAQKAQQTAQTYKEYDNQLTEVIENNRQVELAIESLNEESSDMKNQIQILIDATLLKEREIDGLRRELENLSNRVHLQRMDNRSQMKKRDEKAKELENFASVMEKVNARLKSVQNKALNAEQRLQILEEMMQAEETALRNLDKEQEKVNEMLYRTQRQVIELQDEEKVLKVQNDSLNSNLAAINRNQQQVNNELKRQTEIHYSLSFKCLEAERRLAEIKGLADDPEVEATNMARLNTLEQEYEKLQRLIATTEAQNKKLNYNMNNLVVQYNADEKELEMVRFKIKEAQVYCEGTVKRLRQIRYENSELIVDLNMVKMRCSDLEVGIGGCEQGTYDLEQHRLAFRRAIKDRTVELRSQEDVLLLKKKHLNEELSTLRADLGERKKQIEAMKARFELTAQLLGKNEDGSIMTSTQLKVVSAQERQMLADEGDALNKKVLKAEKEVVALENTLRQFDKSNDNYRKTFRSVDENSKGEL</sequence> + <xref id="FUN_000003-T1" name="FUN_000003-T1 FUN_000003"/> + <matches/> + </protein> + <protein> + <sequence md5="85417aa859c7206bc79b01bf4d7e605e">MKTLSVRLHRGTEFIKDTVHKALVMSAPTPVAPATAPAPKIVDHSLKRKLSGAGGLMGCSSIGSMTSSIAGSSRSHHYALTSQVASSQVIPLPSQVPTAAFLRTYTVAPTALHRSAAARKRNPSTDSLLMDLCLFKPIRPMPITPIKIHKFRGFEVKKPKFVPAGNPDSEDDEDNDEDGTVRKPKPSNLTLPTISDSAFVPMPYIETTNTAINATTTTNSGSRSRSLNTHTSGSAQAITKPKRRRRAPMLTAKRRRKALDTELTTSADAGTEDKAPAVRKATAARGGSKRSRGESITAPTPAEPIKSPVAIKAPTKRKSTSRSEAAKRSRVASVQNDTVLTATSTTSADSIRKAATKRIAANEKVAKRSRGSAALSARPSPPMTRQRARQQISAST</sequence> + <xref id="FUN_000008-T1" name="FUN_000008-T1 FUN_000008"/> + <matches> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polar" start="326" end="352"> + <location-fragments> + <mobidblite-location-fragment start="326" end="352" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="160" end="194"> + <location-fragments> + <mobidblite-location-fragment start="160" end="194" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polar" start="215" end="238"> + <location-fragments> + <mobidblite-location-fragment start="215" end="238" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="215" end="396"> + <location-fragments> + <mobidblite-location-fragment start="215" end="396" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + </matches> + </protein> + <protein> + <sequence md5="f0cd2920445c9bfd83b8d2f135184673">YPFDSHRFVQYNPTSLERNFKYDVLTEHDLGVTVDLINRELYQADSMTLLDPADEKLLEEETLTPTDSVRSRQHSRTVSWLRKSEYISTEQTRFQPQNLENIEAKVGYNVKKSLREETLYLDREAQIKAIEKTFSDTKSEITKHYSKPNVVPVEVLPIFPDFTNWKFPCAQVIFDSDPAPAGKNVPAQLEEMSQAMIRGVMDESGEQFVAYFLPTEQTLEKRRTDFINGELYKEEEEYEYKIAREYNWNVKTKASKGYEENYFFVMRQDGIYYNELETRVRLNKRRVKVGQQPNNTKLVSIFMRIHL</sequence> + <xref id="FUN_000001-T1" name="FUN_000001-T1 FUN_000001"/> + <matches/> + </protein> + <protein> + <sequence md5="275f31fdcd1e48bab0e9176407572897">MVTLRLPWCIRHKPPLCRIGLSHGCECDNSKKMAASSHAPESDRRAQRLRTQSNWNPPDHSALSLGKLVSRKLTPTAVGHWVVGRQRAACACAGGPNADWTDGQPIESSRGCIFQPAPHCHGGRIARHFG</sequence> + <xref id="FUN_000009-T1" name="FUN_000009-T1 FUN_000009"/> + <matches> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="33" end="61"> + <location-fragments> + <mobidblite-location-fragment start="33" end="61" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + </matches> + </protein> + <protein> + <sequence md5="fa279412b7e4df29b27756dd15b3aa74">MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKVFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYKENRREYEKRVKACVEQSFID</sequence> + <xref id="FUN_000014-T1" name="FUN_000014-T1 FUN_000014"/> + <matches/> + </protein> + <protein> + <sequence md5="43d29b4b17225ce880c77b3dbac06f82">MSFCDFLRDAALGANSANLSIVAAALSAARDVGGGSDGGGSAGGATPATGASASSVGNTSAVGASSSSNSSAGQAASSNSNNVTATGSGSAPGGGPTSTGTTSGTQHGSGSGAAAAVDSESDDSEVGRLQALLEARGLPPHLFGALGPRVTHILHRTIGNSSSSKANQLLQGLQSHDESQQLQAAIEMCQMLVMGNEDTLAGFPIKQVVPALIQLLRMEHNFDIMNNACRALAYMLEALPRSSGTVVEAVPVFLEKLQVIQCMDVAEQSLSALEILSRRHNKAILQANGISACLTYLDFFSIVAQRAALAIAANCCLNMHPEEFHFVAESLPLLARLLSQQDKKCIESVCSAFCRLVESFQHDGQRLQQIASPDLLKNCQQLLLVTPAILNTGTFTAVVRMLSLMCCSCPDLAISLLRNDIAATLLYLLTGNAEPAAASATHVELISRSPSELYELTCLIGELMPRLPLDGIFAVDSLLDRPTLNTQDQVHWQWRDDRGSWHNYSTIDSRLIEAANQSSEDEISLSTFGRTYTVDFHAMQQINEDTGTTRPVQRRLNHNYVAPMSAGQDLTTTSAGSAAAGGASTSAAAAAASSNNNNNNNNNPPGNSVNLNQVKRRPSLDARIACLKVRNKMFCLFTRYTLKLNNLPNYNVFFMKYFRRHS</sequence> + <xref id="FUN_000005-T1" name="FUN_000005-T1 FUN_000005"/> + <matches> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polar" start="47" end="112"> + <location-fragments> + <mobidblite-location-fragment start="47" end="112" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="39" end="123"> + <location-fragments> + <mobidblite-location-fragment start="39" end="123" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + </matches> + </protein> + <protein> + <sequence md5="9b59b476da556d837d383301fac6a86b">MNKAVCLVIVIQALRMVQAETPPYIKQCHRNDPKLVDCFIGAIEHLKPYLANGIPDIQLPSVEPFKMDTLALQLTEGPQGYKITLKNMEAFGASNFKVTSLKLSEGSEPFKAKIVMPKLKIEAKYTSSGVLLILPASGGGDFHANFEGVSADLTGKTSIHAFKGANYLHIDALSLVLDVKDVKMSISGAFNNNRILLEATNLFLRENSQVVLEAMQAQLQKKLASEFGKLANQLLKNVPVEQFYVD</sequence> + <xref id="FUN_000015-T1" name="FUN_000015-T1 FUN_000015"/> + <matches/> + </protein> + <protein> + <sequence md5="805cdbb649e54f1527088be8a18adb3d">MASKSFDLVIEEKTKKPERLYQPRRMRWLKYIILPAVFSFALLLILVNVDFSDNSEDSTHLGNDTSLIISGYGFENNTLRRGFFSGGIALHSLVIENCTIVHINDAAFNQESTVNITSLQLINVQLENLTESALEGLQKLQNFTLVNENNHFRPFGFLSAVAESLVSAEIHQSLAAAISYSVCDFLGSRNFPQLKYLDLSGTHLDKSLIKESFDNLPALEQLLLRNCGLGNIEWEIVRPRLKLLHYLDLGGAQKTGNYEHQLDVSAFSPETTTNAEEISTILAKRAMAPEVVGTTTLGPTTSIEISPPSTQSTTTPKEESTSMTETTILTTPSPKCEEELCQDLECSRITTDTVASADLGKSSCQDGLLVEICESTCTTPTFFCVILGENFTSASNCCSHHTMRCVVSAQVSWFEDHSGLVIGLGVGLLFIGSFLGMLIVFGTLRLNPSWLRGNKRRESNTIGLIQGRFEKDPYEQVG</sequence> + <xref id="FUN_000016-T1" name="FUN_000016-T1 FUN_000016"/> + <matches> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="299" end="331"> + <location-fragments> + <mobidblite-location-fragment start="299" end="331" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + </matches> + </protein> + <protein> + <sequence md5="5f92e26b5d87a35b1b6c91cf1c65ceb4">MSSFLLVIFILLALRTSESSETGNPLANEPDPLYMKLVDPMVAGESPKRMIKDQKDVGLKSTSSSEELRKLPKTRGRQKRFIRNPNYVKANEFYDKMLSSEYVSKRYKDLPPPHPGFGADQPPA</sequence> + <xref id="FUN_000017-T1" name="FUN_000017-T1 FUN_000017"/> + <matches> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="54" end="76"> + <location-fragments> + <mobidblite-location-fragment start="54" end="76" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polyampholyte" start="54" end="73"> + <location-fragments> + <mobidblite-location-fragment start="54" end="73" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + </matches> + </protein> + <protein> + <sequence md5="f9099751b2b6f073ed8449fa9b2f4925">MYDQEPYKCHLCSKTFRMKGSLRIHLKVVHMMGVPCSNPNPNPNPSPTPASTTSAVTATPKLSICDRIRHTEPGALGNGNNSTCTASQPYALSGALSMLQQSPSSPESGTATPKLWECDVCSKSFTTKYFLKKHKRLHTGEMPYTCEICARTFTFQQSYHKHLLYHSEVKPHVCGVCGRAFKELSTLHNHQRIHSGEKPFKCEVCGEYRSNPLISRPLFC</sequence> + <xref id="FUN_000002-T1" name="FUN_000002-T1 FUN_000002"/> + <matches/> + </protein> + <protein> + <sequence md5="a89f98188d0d86b04bd04507a739aafc">MRCVFCGSGSEQQHSRWEIKMLQESCRTDHGFHQDSQAIQYLYEILASYNRDEQRAFLQFVTGSPRLPTGGFKALTPPLTIVRKTLDENQNPNDYLPSVMTCVNYLKLPDYSSREVMRQKLKVAANEGSMSFHLS</sequence> + <xref id="FUN_000004-T1" name="FUN_000004-T1 FUN_000004"/> + <matches/> + </protein> + <protein> + <sequence md5="19d5dff18158daa9845aa9a4e207fd10">MCGNPAVGNGTRALILVGGYGTRLRPLTLSTPKPLVEFANKPILLHQLEALVDAGCRQVILAVSYRAEQMEKELKVEAKKLGVELIFSHETEPLGTAGPLALAKTILAASSEPFFVLNSDVICDFPFKQLVQFHCNHGKEGTIVVTKVEEPSKYGVVLYDENGCIKNFIEKPQEFVSNKINAGIYIFNPSVLDRIEVKPTSIEKEVFPEMTQQQELYAMDLTGFWMDIGQPKDFLTGMCLYLSSLRQKQSPKLYTGPGVVGNVLVDPTAKIGEGCRIGPNVTIGPDVVIEDGVCIKRSTILKGAIVRSHSWLDSCIVGWRSTVGRWVRIEGITVLGEDVIVKDELYINGGQVLPHKSIAASLRGAIVQAGQLVILPDEEVFSHVQGVWNLSSDQGNLGSFVVTNIRLVWFADANETFNISLPYLQIESSKYGPALVIQTAETGGGYVLGFRVDPAERLNELFKELSSLHTVYGEHPNFGIQYNANDARRRLEAASEEAAQASQIKVDNFEELDERQEREINTKLNSYLAEGCLGKVPSQGERAPVYCKELGFAMEPIGDGYKLQDLWNVMPTKMETME</sequence> + <xref id="FUN_000007-T1" name="FUN_000007-T1 FUN_000007"/> + <matches/> + </protein> + <protein> + <sequence md5="5ca2cbf7936c8539c0f5b069cce1b285">MPPTINNSAVNSAAEKRPQRQTERKSEIICRVKYGNNLPDIPFDLKFLQYPFDSHRFVQYNPTSLERNFKYDVLTEHDLGVTVDLINRELYQADSMTLLDPADEKLLEEETLTPTDSVRSRQHSRTVSWLRKSEYISTEQTRFQPQNLENIEAKVGYNVKKSLREETLYLDREAQIKAIEKTFSDTKSEITKHYSKPNVVPVEVLPIFPDFTNWKFPCAQVIFDSDPAPAGKNVPAQLEEMSQAMIRGVMDESGEQFVAYFLPTEQTLEKRRTDFINGELYKEEEEYEYKIAREYNWNVKTKASKGYEENYFFVMRQDGIYYNELETRVRLNKRRVKVGQQPNNTKLVVKHRPLDSMEHRMQRYRERQLEVPGEEEEIVEEVREEEQMQIIGETEKTSEDAAVGAQAASGADSPAQVARDRQSRSRSRTRS</sequence> + <xref id="FUN_000018-T1" name="FUN_000018-T1 FUN_000018"/> + <matches> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="1" end="25"> + <location-fragments> + <mobidblite-location-fragment start="1" end="25" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="375" end="431"> + <location-fragments> + <mobidblite-location-fragment start="375" end="431" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polar" start="1" end="16"> + <location-fragments> + <mobidblite-location-fragment start="1" end="16" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + </matches> + </protein> + <protein> + <sequence md5="5f4207144e447f181edd730fcff61ef2">MDFIHEAVGTSAAPSANPGPMPLCQPVRLELPFSPRHSFALGHFPFQLCPCLYAVWVQTMGLVLLLLIVFAPFLFRVLFKPCNPKRYLTT</sequence> + <xref id="FUN_000010-T1" name="FUN_000010-T1 FUN_000010"/> + <matches/> + </protein> + <protein> + <sequence md5="039e9dcd47be3a3db8b02494ffde402e">MSLDRRGEITTPPTRYDLTLGSDKSSSLSRSEAGTYDVIQAEIQHAKRQELATGVATASHQNGNGNGNGHTLSTQHDIEAEVKKRKWPTEPSYFLAKELLMTERTYKKDLDVLNTTFRQVLSLGDVEQLQPLFELLDSLAQHHNLFLRDIEHRMVQWEGRGGHEAHRIGDVMMKHMAALPIYDEYVQTHLDILHCMNDMYEGDERFRQVYKEFEQQKVCYLPIGELLLKPLNRLLHYQLILERLCDYYGEEHIDYADAMAVHHLLVRSTKGIRSQLPDSANFVELCELQRDINFEQLVQPHRRLIRQGCLLKHSKRGLQQRMFFLFSDLLLYGSKSPLDQSFRILGHVPVRSLLTENAEHNTFSIFGGQCAITVSAGTTAEKTLWLAELSKAAADIKNRPPNMQLQLTTLKNCSSSEEGLDLFGLSNGNNSSLNSSVNGGGPLTTQQQKLQLQQQQQNRTQPSRSNTALHVCWHRGATVGLGDHLIAAEHQLSGYLLRKFKNSSGWQKLWVVFTSFCLYFYKSYQDEFALASLPLLGYTVGPPGHQDAVQKEFVFKLSFKNHVYFFRAESAHTYNR</sequence> + <xref id="FUN_000013-T1" name="FUN_000013-T1 FUN_000013"/> + <matches> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polar" start="15" end="31"> + <location-fragments> + <mobidblite-location-fragment start="15" end="31" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="1" end="31"> + <location-fragments> + <mobidblite-location-fragment start="1" end="31" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + </matches> + </protein> +</protein-matches>
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/prots.fa Mon Nov 15 17:53:24 2021 +0000 @@ -0,0 +1,155 @@ +>FUN_000001-T1 FUN_000001 +YPFDSHRFVQYNPTSLERNFKYDVLTEHDLGVTVDLINRELYQADSMTLLDPADEKLLEEETLTPTDSVRSRQHSRTVSW +LRKSEYISTEQTRFQPQNLENIEAKVGYNVKKSLREETLYLDREAQIKAIEKTFSDTKSEITKHYSKPNVVPVEVLPIFP +DFTNWKFPCAQVIFDSDPAPAGKNVPAQLEEMSQAMIRGVMDESGEQFVAYFLPTEQTLEKRRTDFINGELYKEEEEYEY +KIAREYNWNVKTKASKGYEENYFFVMRQDGIYYNELETRVRLNKRRVKVGQQPNNTKLVSIFMRIHL +>FUN_000002-T1 FUN_000002 +MYDQEPYKCHLCSKTFRMKGSLRIHLKVVHMMGVPCSNPNPNPNPSPTPASTTSAVTATPKLSICDRIRHTEPGALGNGN +NSTCTASQPYALSGALSMLQQSPSSPESGTATPKLWECDVCSKSFTTKYFLKKHKRLHTGEMPYTCEICARTFTFQQSYH +KHLLYHSEVKPHVCGVCGRAFKELSTLHNHQRIHSGEKPFKCEVCGEYRSNPLISRPLFC +>FUN_000003-T1 FUN_000003 +MIHSAKTTLVEWTEAMEDGNKGYQLIEKYYLDDQQKARELNIKRQLLQADIDKRRKQVVLLYDEQMTLEKNLERTACLYR +SAHAERRQMVETWKSAVNQMTQREHDIQRSEIECAELAQKAQQTAQTYKEYDNQLTEVIENNRQVELAIESLNEESSDMK +NQIQILIDATLLKEREIDGLRRELENLSNRVHLQRMDNRSQMKKRDEKAKELENFASVMEKVNARLKSVQNKALNAEQRL +QILEEMMQAEETALRNLDKEQEKVNEMLYRTQRQVIELQDEEKVLKVQNDSLNSNLAAINRNQQQVNNELKRQTEIHYSL +SFKCLEAERRLAEIKGLADDPEVEATNMARLNTLEQEYEKLQRLIATTEAQNKKLNYNMNNLVVQYNADEKELEMVRFKI +KEAQVYCEGTVKRLRQIRYENSELIVDLNMVKMRCSDLEVGIGGCEQGTYDLEQHRLAFRRAIKDRTVELRSQEDVLLLK +KKHLNEELSTLRADLGERKKQIEAMKARFELTAQLLGKNEDGSIMTSTQLKVVSAQERQMLADEGDALNKKVLKAEKEVV +ALENTLRQFDKSNDNYRKTFRSVDENSKGEL +>FUN_000004-T1 FUN_000004 +MRCVFCGSGSEQQHSRWEIKMLQESCRTDHGFHQDSQAIQYLYEILASYNRDEQRAFLQFVTGSPRLPTGGFKALTPPLT +IVRKTLDENQNPNDYLPSVMTCVNYLKLPDYSSREVMRQKLKVAANEGSMSFHLS +>FUN_000005-T1 FUN_000005 +MSFCDFLRDAALGANSANLSIVAAALSAARDVGGGSDGGGSAGGATPATGASASSVGNTSAVGASSSSNSSAGQAASSNS +NNVTATGSGSAPGGGPTSTGTTSGTQHGSGSGAAAAVDSESDDSEVGRLQALLEARGLPPHLFGALGPRVTHILHRTIGN +SSSSKANQLLQGLQSHDESQQLQAAIEMCQMLVMGNEDTLAGFPIKQVVPALIQLLRMEHNFDIMNNACRALAYMLEALP +RSSGTVVEAVPVFLEKLQVIQCMDVAEQSLSALEILSRRHNKAILQANGISACLTYLDFFSIVAQRAALAIAANCCLNMH +PEEFHFVAESLPLLARLLSQQDKKCIESVCSAFCRLVESFQHDGQRLQQIASPDLLKNCQQLLLVTPAILNTGTFTAVVR +MLSLMCCSCPDLAISLLRNDIAATLLYLLTGNAEPAAASATHVELISRSPSELYELTCLIGELMPRLPLDGIFAVDSLLD +RPTLNTQDQVHWQWRDDRGSWHNYSTIDSRLIEAANQSSEDEISLSTFGRTYTVDFHAMQQINEDTGTTRPVQRRLNHNY +VAPMSAGQDLTTTSAGSAAAGGASTSAAAAAASSNNNNNNNNNPPGNSVNLNQVKRRPSLDARIACLKVRNKMFCLFTRY +TLKLNNLPNYNVFFMKYFRRHS +>FUN_000006-T1 FUN_000006 +MKFRALMQDPLYMKEFQAIVATLTKLAKDCVMILGSRQMHFIVNEDQSSAASPLVWAGITAEEYFPEYRMEAAHPDQEYI +VLGVSSANLGRALSVLRGGGVNSCKLKLQRIQFPCISVIASVLTSSSTEAREVVHDVPVTIIPGSDWSAYVVPRVPNSQL +ALGLPSLRLLKSLIDKLKNISPSLEFQVNVDGELNVIATSEMSTVTSRFQKLLIRTVSGSQQEASCSVDSRKASAFFGAL +QLPNEELTIGIDREHSIHLQIDVRQDVVLHSILPAVCM +>FUN_000007-T1 FUN_000007 +MCGNPAVGNGTRALILVGGYGTRLRPLTLSTPKPLVEFANKPILLHQLEALVDAGCRQVILAVSYRAEQMEKELKVEAKK +LGVELIFSHETEPLGTAGPLALAKTILAASSEPFFVLNSDVICDFPFKQLVQFHCNHGKEGTIVVTKVEEPSKYGVVLYD +ENGCIKNFIEKPQEFVSNKINAGIYIFNPSVLDRIEVKPTSIEKEVFPEMTQQQELYAMDLTGFWMDIGQPKDFLTGMCL +YLSSLRQKQSPKLYTGPGVVGNVLVDPTAKIGEGCRIGPNVTIGPDVVIEDGVCIKRSTILKGAIVRSHSWLDSCIVGWR +STVGRWVRIEGITVLGEDVIVKDELYINGGQVLPHKSIAASLRGAIVQAGQLVILPDEEVFSHVQGVWNLSSDQGNLGSF +VVTNIRLVWFADANETFNISLPYLQIESSKYGPALVIQTAETGGGYVLGFRVDPAERLNELFKELSSLHTVYGEHPNFGI +QYNANDARRRLEAASEEAAQASQIKVDNFEELDERQEREINTKLNSYLAEGCLGKVPSQGERAPVYCKELGFAMEPIGDG +YKLQDLWNVMPTKMETME +>FUN_000008-T1 FUN_000008 +MKTLSVRLHRGTEFIKDTVHKALVMSAPTPVAPATAPAPKIVDHSLKRKLSGAGGLMGCSSIGSMTSSIAGSSRSHHYAL +TSQVASSQVIPLPSQVPTAAFLRTYTVAPTALHRSAAARKRNPSTDSLLMDLCLFKPIRPMPITPIKIHKFRGFEVKKPK +FVPAGNPDSEDDEDNDEDGTVRKPKPSNLTLPTISDSAFVPMPYIETTNTAINATTTTNSGSRSRSLNTHTSGSAQAITK +PKRRRRAPMLTAKRRRKALDTELTTSADAGTEDKAPAVRKATAARGGSKRSRGESITAPTPAEPIKSPVAIKAPTKRKST +SRSEAAKRSRVASVQNDTVLTATSTTSADSIRKAATKRIAANEKVAKRSRGSAALSARPSPPMTRQRARQQISAST +>FUN_000009-T1 FUN_000009 +MVTLRLPWCIRHKPPLCRIGLSHGCECDNSKKMAASSHAPESDRRAQRLRTQSNWNPPDHSALSLGKLVSRKLTPTAVGH +WVVGRQRAACACAGGPNADWTDGQPIESSRGCIFQPAPHCHGGRIARHFG +>FUN_000010-T1 FUN_000010 +MDFIHEAVGTSAAPSANPGPMPLCQPVRLELPFSPRHSFALGHFPFQLCPCLYAVWVQTMGLVLLLLIVFAPFLFRVLFK +PCNPKRYLTT +>FUN_000011-T1 FUN_000011 +MEVDLDESIKEAAPEKKVHSITRSSPSPKRAKNSSPEPPKPKSTKSKATTPRVKKEKPAADLESSVLTDEERHERKRASA +VLYQKYKNRSSCLNPGSKEIPKGSPDCLSGLTFVVTGVLESMEREEAESVIKEYGGKVMTVVGKKLKYLVVGEEAGPKKL +AVAEELNIPILSEDGLFDLIREKSGIAKQVKEEKKSPKKEHSSEEKGKKEVKTSRRSSDKKEKEATKLKYGEKHDIAKHK +VKEEHTSPKETKDKLNDVPAVTLKVKKEPSSQKEHPPSPRTADLKTLDVVGMAWVDKHKPTSIKEIPQRPNPWAKNDDGS +FYKAALLSGPPGIGKTTTATLVVKELGFDAVEFNASDTRSKRLLKDEVSTLLSNKSLSGYFTGQGQAVSRKHVLIMDEVD +GMAGNEDRGGMQELIALIKDSSIPIICMCNDRNHPKIRSLVNYCYDLRFQRPRLEQIKGKIMSICFKEKVKISPAKVEEI +IAATNNDIRQSINHIALLSAKEDASQKSGQQVATKDLKLGPWEVVRKVFTADEHKHMSFADKSDLFFHDYSLAPLFVQQN +YLQVLPQGNKKDVLAKVAATADALSLGDLVEKRIRANSAWSLLPTQAFFSSVLPGEHMCGHFTGQINFPGWLGKNSKSGK +RARLAQELHDHTRVCTSGSRLSVRLDYAPFLLDNIVRPLAKDGQEGVPAALDVMKDYHLLREDLDSLVELTSWPGKKSPL +DAVDGRVKAALTRSYNKEVMAYSYSAQAGIKKKKSEAAGADDDYLDEGPGEEDGAGGHLSSEEDEDKDNLELDSLIKAKK +RTTTSKASDSDSLPHPLPKHPPHCCCCWARPGQSQGHSQPPSSRIHAHAREPGFCAPLPFPFPLRSVNRCRALYRYFACL +RRASCCVFWLHMFTFQHSPKRHCSECESIQGSSGGSVVNEGFE +>FUN_000012-T1 FUN_000012 +MSLADMGTASRSAGGEGGRHYDLATGGAGSGGHPVGGGLPGGRMTHSLSTPSGVDGTPSTPRHRGGKKLTVRIQMLDDSI +TMFQVQAKALGRVLFEQVCRQLNLLEADYFGLEYQEVSTHTKYWLDLEKPMNRQVGLSLIDPVLRFCIKFYTPDPAQLEE +EYTRYLFCLQIKRDLATGSLQCNDNTAALMASYIVQASCGDFVPEDYPDHTYLSSYRFVPNQDATMQRKIMENHKKHVGQ +SPAEADLNLLETARRCELYGMKMHPAKDVEGVPLNLAVAHMGITVFQNITRINTFSWAKIRKISFKRKRFLVKLHPEGYG +YYKDTVEFFFEGRNECKNFWKKCVENHGFFRCTAVQNTPRRKTRVLSRGSSFRYSGKTQKQIIEFVRENYVKRQNFQRSQ +SFRQGPLNASSRSQSHTYVNSSISANPLLPIDTAAWDYRNQCSDSMTPSLTKKAADTLDRRRDNPIGHMRSQVTAAQVEI +YQTKNYAADSPTSQEEAECSAAGAERQHHSAVAMDKLNSNRSLSPQGPQSWTSPSHSSHHQQRGPDPARVHPGDHNTAHQ +HQHAQQQHQPQHYAQHQHSGSFGGSQQLYGVGGGGGGSGNCGHGGGGGGACGGGGGGGISRGGSGFGLDGIYHQSGDYGG +SLSGGSIGLGFGLGLGQCPSSAASVTGVPCMLNNANANSTETETDNIIYTDINDMGHYKYPDFHSSAHQEHKISNSEHLN +LNERNDIYATVNRKAKSKIREKHFSDEFIDQSILQYTRAKQMGLSQVPVLLQQPSTSAYAAALQERSYNSGSYQYHNDLN +HPSESSSSSYFGTGFGTKRYGQSERTKLAQSENYLTPSLDSQSSRHTHSLPRNSELSGVDSVDSYDSHYITHHSVGILPP +GHLSSSSEKLDFQLPSGNLYSTTQFVKPEDASAHYMEDEEEEEEDEGENIYDQVERDSWLKSSSCKDLFERYSSTYYDRE +HSKPMTAFDKEFLSSNRIDSPVTRYDDSRHSLYVAKNHSIDAHQGFSPLPQSKVYSSSYPGSTYNTQEHKRQHGHHMDYS +GSQDDISQDSYELLEKYDIDFFGGRGRSEDHMRSCSLDSGNYIPSDDESVSEGHQQHKYRSEMDVKSKSAADIMNEIWDA +EDPRYLPREKLSVKSDGNFYKKIQEALISAFRRRSDSENIFSFDQDRIECIQKYTKQWEGQQPKDEKSKQSPEYPLTPEL +VSEFEKQQARLMAHQKITRKEELIAKTHFEEYNPIMVPLNYSSHATVERTKSDPNSLANRARLGSNSRRHVLMHQKSIDL +TPADSNSSDEDYIYKQIPSAPPLCKAHGNFEIPKCYDGSAASQIAQELPKTGFELPKSFFRDYERRFTKVLKEDIPYVLH +KRHIMNGTAPSPSEKKHTKPKSPKSPKSPKSPKSPKSPKSPKASSGGLGPGSTDFLPDILDSLLPSDTKEFLFTQNIDLS +KVDPITLEIDKTIPTIHLSSPKRDITKQMDASTLEKLNKKLSQIESDSATSSRTESMQQQKLEQKQMELIQSLRKELQAN +ARKANKPRVIPKTKSAGKSKKGKTRITSFSSDDESLDSDDVFGSAEAIPDRLEFSPPQSRKEIESILRIEQSRLISAAWG +RGQTMSSTEIEGSPPQCRRLADLESRYHTQKLDPQYANATELRRISERSISIPSSEDEPHMPMRGRIDECTNDYQRNENI +PSPILEHAEFFRSNDDIYETCHEERITGSDIDYTLKKQTSSGSKSKVKLIEEIIDSSIVMRSKGHAPILFAHARLNLSEG +SVSLQRQKATQQQSPTTERRTKSLDTPVISLHRLPPMNAFSSKDDTVGFEEEAEILEEKSLERENQATAQDEDTADSIHS +CAGSIPTQSSYQTNGRDSLLSAVSIDTEEAELLNQLRYIEKIALQGVKIKDKKKSKMKLRSGDHLILNIPKYRFTDWSPY +SSANSSRKTSPGVSRASSIESTGKGKLKTSEPYKGKPVSRSRPESRRTSADDIKARDGRGSKKSSPKERPRSIEMRRLSK +DKSKSQEETEADIAKRKERQQKLYESAMKQTITMLSPVKDTLPAFPAPGDKILVKTDGDKIIIETEFKSKAEDHVLIAKS +PRKLDNSLVKFSRSFDEGRSPDKLDKANRSFEDRNKSFEDSEKSDAPEDMLIKSPKKIAKAQELKQKIEGSVVHKKIDGK +SSSLERPAEHHYLGPDVKARSLDDKRQATEAAKKNEEKPAPVVRSAIGDQRRSLEILKRSLPSEDARDSEGAFSRKPSTA +ESLDSYVSVDESHSAASKSPVPGTGGGTEGYPHRVPTIECEEPSIEEDENSSERRHLKVGGQDTNRLSLDRSRSDETGSW +MTVECDEFIGSDTSDNEPRTLEPDRNVLETQATLEDANPLEYSNCATPTSDLNILLTPPNASPQIEKSVLETFEKYTGSS +DTGKKKNTLDKQSDRSKSSDSWTSGEKDTSPQRQQDWSLSVGKEKSSVEEESSVSCSIARPLGISQDFGKEEARKCQELK +QRMLQLEVGKEEITPTPSNEQTPTNEPKILVSKKPSTPTLEKQSPIDLGTSTESYLEPIEERIAKILDRGGARTEDSESS +SGGSRKPPRIEKPARANAGKKLSVTRADAGKSGSDRSSQESKSSFDSKGSLSVESRGSFETESSSGSLGAAQRRGELAQK +EQQSTWRPFPIESSNSSSTDDPWHHVETDGGYERYDAQNPLRDSSDSDVKEASPDDQKDASDASYQDELNDFPATFGYPA +MTSSLGGIGVNPTDIIGYSTGFTLGRTLSRISERSTASEKSSMEDDVSKASTHSVSMRDESVGSTDHQPSLSSDSRSNTN +LAYISDADRRTSAEMPEIPCDSATGDRLSSFGSLNEPKSPTLVTGRFSVTHVDEQQGDDVERHTLMCLSNAGSQDSEDWP +LPEIPFDHVPVKPADSLYAMPDLDKPVPKSFCWKASLSFQQSQDSLDWPSPPSSAIGAPIIVENIETYYASEVQSADKVI +LDEEMAVGPPDVAKVLPYEDTAYLMSAAFDDNDFGNEQLQPDTVSCLSSTLSAASCLSSSLNVSCTTSSTQATARALRKN +SSPEVIVAQPTRSPAPRSPLSEDELFSSDDVFMPGTIKVQLSPDAQLRKLSKGSNNSDTSIDDILSGSTTYLEDQTTVRK +NYEARLSSGGGGASCKKCSHSSHSEEETSSLGTDLDGTVRMGGLQQKKCTHSSHSEDTSIGLSISEWSTGTNTVRQYANL +SGSDSLSAVSTHSCAKSEKSNQTKSSISSINKSAESLNEQSGGSSFSHKFSGDNGSSDGLRYDMLSNSETDKLSEATSAT +RSDDTTLTLTEMAHTISEWSTSSSRTLVGVAPGEYLPLKQALSGNKTSLSSPSEEKRCALPQVHRRSGSNGNQARAAQEH +ADSQTGPETSAAARKRRSLEMMSKLYQSQEICSESESPFVERLYAHSEKLTERYQSQEFVPLHGGPPASHLASSTTSQIQ +TQQPQQVRQKPRAPQPPTKPKPAVTRPIMQALLNKMKQPGLAEQAAEAAEAEEKKAMIAASAVAAKPPPPPVPTVPPIVT +PSDLPGDAVAPPPKPLAKHHSYDDRTLSKTQIREFKTTSKQLRQSSSFHEHMLSKSQQSSQELPMRIDEERDPHSTSSAT +NTTTTTNTLNSESTEPNSPQMPQRADKLVRCSPYYSSSLSSESPPNQLLQKPPRKTATQLSAGAVAASLKSPPSGNDTDS +SLDVRGQEAKMRSRGYRKKRQLPVKRMRANLTAAALLEQAESSECSEGYVPEVDSGSSEYSSCQRDDQYLEFDEELERDQ +TDDYEDYPQYSGKFESLDMSDNVDEMGFPRYDRLSHITKPMYHQALVMERPNPVQLPAPANHPMPPATGQPVKPARTKKR +QFKREDSTAAGTSGHSTAAPQVRPYHGRSYCNPEESEYETRGGGLSDELANSSEDSCSGFGGDAGASGSGTIRRGTTKGA +GQDQEQGTGGQARHVPYPDFLSDYESEPIEYERYACGLDIRVDPPPKFHDSDELSDQ +>FUN_000013-T1 FUN_000013 +MSLDRRGEITTPPTRYDLTLGSDKSSSLSRSEAGTYDVIQAEIQHAKRQELATGVATASHQNGNGNGNGHTLSTQHDIEA +EVKKRKWPTEPSYFLAKELLMTERTYKKDLDVLNTTFRQVLSLGDVEQLQPLFELLDSLAQHHNLFLRDIEHRMVQWEGR +GGHEAHRIGDVMMKHMAALPIYDEYVQTHLDILHCMNDMYEGDERFRQVYKEFEQQKVCYLPIGELLLKPLNRLLHYQLI +LERLCDYYGEEHIDYADAMAVHHLLVRSTKGIRSQLPDSANFVELCELQRDINFEQLVQPHRRLIRQGCLLKHSKRGLQQ +RMFFLFSDLLLYGSKSPLDQSFRILGHVPVRSLLTENAEHNTFSIFGGQCAITVSAGTTAEKTLWLAELSKAAADIKNRP +PNMQLQLTTLKNCSSSEEGLDLFGLSNGNNSSLNSSVNGGGPLTTQQQKLQLQQQQQNRTQPSRSNTALHVCWHRGATVG +LGDHLIAAEHQLSGYLLRKFKNSSGWQKLWVVFTSFCLYFYKSYQDEFALASLPLLGYTVGPPGHQDAVQKEFVFKLSFK +NHVYFFRAESAHTYNR +>FUN_000014-T1 FUN_000014 +MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKVFHPN +VYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYKENRREYEKRVKACVEQSFID +>FUN_000015-T1 FUN_000015 +MNKAVCLVIVIQALRMVQAETPPYIKQCHRNDPKLVDCFIGAIEHLKPYLANGIPDIQLPSVEPFKMDTLALQLTEGPQG +YKITLKNMEAFGASNFKVTSLKLSEGSEPFKAKIVMPKLKIEAKYTSSGVLLILPASGGGDFHANFEGVSADLTGKTSIH +AFKGANYLHIDALSLVLDVKDVKMSISGAFNNNRILLEATNLFLRENSQVVLEAMQAQLQKKLASEFGKLANQLLKNVPV +EQFYVD +>FUN_000016-T1 FUN_000016 +MASKSFDLVIEEKTKKPERLYQPRRMRWLKYIILPAVFSFALLLILVNVDFSDNSEDSTHLGNDTSLIISGYGFENNTLR +RGFFSGGIALHSLVIENCTIVHINDAAFNQESTVNITSLQLINVQLENLTESALEGLQKLQNFTLVNENNHFRPFGFLSA +VAESLVSAEIHQSLAAAISYSVCDFLGSRNFPQLKYLDLSGTHLDKSLIKESFDNLPALEQLLLRNCGLGNIEWEIVRPR +LKLLHYLDLGGAQKTGNYEHQLDVSAFSPETTTNAEEISTILAKRAMAPEVVGTTTLGPTTSIEISPPSTQSTTTPKEES +TSMTETTILTTPSPKCEEELCQDLECSRITTDTVASADLGKSSCQDGLLVEICESTCTTPTFFCVILGENFTSASNCCSH +HTMRCVVSAQVSWFEDHSGLVIGLGVGLLFIGSFLGMLIVFGTLRLNPSWLRGNKRRESNTIGLIQGRFEKDPYEQVG +>FUN_000017-T1 FUN_000017 +MSSFLLVIFILLALRTSESSETGNPLANEPDPLYMKLVDPMVAGESPKRMIKDQKDVGLKSTSSSEELRKLPKTRGRQKR +FIRNPNYVKANEFYDKMLSSEYVSKRYKDLPPPHPGFGADQPPA +>FUN_000018-T1 FUN_000018 +MPPTINNSAVNSAAEKRPQRQTERKSEIICRVKYGNNLPDIPFDLKFLQYPFDSHRFVQYNPTSLERNFKYDVLTEHDLG +VTVDLINRELYQADSMTLLDPADEKLLEEETLTPTDSVRSRQHSRTVSWLRKSEYISTEQTRFQPQNLENIEAKVGYNVK +KSLREETLYLDREAQIKAIEKTFSDTKSEITKHYSKPNVVPVEVLPIFPDFTNWKFPCAQVIFDSDPAPAGKNVPAQLEE +MSQAMIRGVMDESGEQFVAYFLPTEQTLEKRRTDFINGELYKEEEEYEYKIAREYNWNVKTKASKGYEENYFFVMRQDGI +YYNELETRVRLNKRRVKVGQQPNNTKLVVKHRPLDSMEHRMQRYRERQLEVPGEEEEIVEEVREEEQMQIIGETEKTSED +AAVGAQAASGADSPAQVARDRQSRSRSRTRS
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/transcript_out/out.gff3 Mon Nov 15 17:53:24 2021 +0000 @@ -0,0 +1,400 @@ +##gff-version 3 +##feature-ontology http://song.cvs.sourceforge.net/viewvc/song/ontology/sofa.obo?revision=1.269 +##interproscan-version 5.52-86.0 +##sequence-region FUN_000018-T1 1 1295 +FUN_000018-T1 provided_by_user nucleic_acid 1 1295 . + . ID=FUN_000018-T1;Name=FUN_000018-T1;md5=1e5f0b711475708f1f8b964633355652 +FUN_000018-T1_orf336 getorf ORF 312 668 . + . Target=pep_FUN_000018-T1_312_668 1 119;ID=orf_FUN_000018-T1_312_668;Name=FUN_000018-T1_orf336;md5=1e5f0b711475708f1f8b964633355652 +FUN_000018-T1_orf336 getorf polypeptide 1 119 . + . ID=pep_FUN_000018-T1_312_668;md5=0b28fe115d4cc09260b038b19fb0b21d +FUN_000018-T1_orf336 MobiDBLite protein_match 70 84 . + . date=09-11-2021;Target=null 70 84;ID=match$1_70_84;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000018-T1_orf336 MobiDBLite protein_match 37 53 . + . date=09-11-2021;Target=null 37 53;ID=match$2_37_53;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000018-T1_orf336 MobiDBLite protein_match 37 87 . + . date=09-11-2021;Target=null 37 87;ID=match$3_37_87;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +##sequence-region FUN_000012-T1 1 11934 +FUN_000012-T1 provided_by_user nucleic_acid 1 11934 . + . ID=FUN_000012-T1;Name=FUN_000012-T1;md5=bb41314e271ff246f69dd1a3a2cba23a +FUN_000012-T1_orf133 getorf ORF 1 11931 . + . Target=pep_FUN_000012-T1_1_11931 1 3977;ID=orf_FUN_000012-T1_1_11931;Name=FUN_000012-T1_orf133;md5=bb41314e271ff246f69dd1a3a2cba23a +FUN_000012-T1_orf133 getorf polypeptide 1 3977 . + . ID=pep_FUN_000012-T1_1_11931;md5=01beedc2fbf8012cba37f0c0d39aa071 +FUN_000012-T1_orf133 MobiDBLite protein_match 1090 1105 . + . date=09-11-2021;Target=null 1090 1105;ID=match$4_1090_1105;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 1527 1541 . + . date=09-11-2021;Target=null 1527 1541;ID=match$5_1527_1541;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 912 931 . + . date=09-11-2021;Target=null 912 931;ID=match$6_912_931;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 559 581 . + . date=09-11-2021;Target=null 559 581;ID=match$7_559_581;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 1920 2025 . + . date=09-11-2021;Target=null 1920 2025;ID=match$8_1920_2025;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 3426 3463 . + . date=09-11-2021;Target=null 3426 3463;ID=match$9_3426_3463;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 3552 3583 . + . date=09-11-2021;Target=null 3552 3583;ID=match$10_3552_3583;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 3910 3929 . + . date=09-11-2021;Target=null 3910 3929;ID=match$11_3910_3929;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 3429 3449 . + . date=09-11-2021;Target=null 3429 3449;ID=match$12_3429_3449;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 2398 2422 . + . date=09-11-2021;Target=null 2398 2422;ID=match$13_2398_2422;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 836 859 . + . date=09-11-2021;Target=null 836 859;ID=match$14_836_859;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 3812 3938 . + . date=09-11-2021;Target=null 3812 3938;ID=match$15_3812_3938;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 1920 1945 . + . date=09-11-2021;Target=null 1920 1945;ID=match$16_1920_1945;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 2590 2630 . + . date=09-11-2021;Target=null 2590 2630;ID=match$17_2590_2630;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 1362 1410 . + . date=09-11-2021;Target=null 1362 1410;ID=match$18_1362_1410;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 2492 2531 . + . date=09-11-2021;Target=null 2492 2531;ID=match$19_2492_2531;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 3596 3621 . + . date=09-11-2021;Target=null 3596 3621;ID=match$20_3596_3621;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 2757 2773 . + . date=09-11-2021;Target=null 2757 2773;ID=match$21_2757_2773;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 3213 3252 . + . date=09-11-2021;Target=null 3213 3252;ID=match$22_3213_3252;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 3133 3158 . + . date=09-11-2021;Target=null 3133 3158;ID=match$23_3133_3158;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 3040 3060 . + . date=09-11-2021;Target=null 3040 3060;ID=match$24_3040_3060;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 1947 2024 . + . date=09-11-2021;Target=null 1947 2024;ID=match$25_1947_2024;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 2774 2799 . + . date=09-11-2021;Target=null 2774 2799;ID=match$26_2774_2799;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 3345 3371 . + . date=09-11-2021;Target=null 3345 3371;ID=match$27_3345_3371;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 486 508 . + . date=09-11-2021;Target=null 486 508;ID=match$28_486_508;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 447 467 . + . date=09-11-2021;Target=null 447 467;ID=match$29_447_467;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 3718 3778 . + . date=09-11-2021;Target=null 3718 3778;ID=match$30_3718_3778;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 2488 2710 . + . date=09-11-2021;Target=null 2488 2710;ID=match$31_2488_2710;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 49 68 . + . date=09-11-2021;Target=null 49 68;ID=match$32_49_68;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 2211 2234 . + . date=09-11-2021;Target=null 2211 2234;ID=match$33_2211_2234;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 520 581 . + . date=09-11-2021;Target=null 520 581;ID=match$34_520_581;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 2095 2134 . + . date=09-11-2021;Target=null 2095 2134;ID=match$35_2095_2134;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 542 558 . + . date=09-11-2021;Target=null 542 558;ID=match$36_542_558;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 2637 2661 . + . date=09-11-2021;Target=null 2637 2661;ID=match$37_2637_2661;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 3816 3830 . + . date=09-11-2021;Target=null 3816 3830;ID=match$38_3816_3830;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 1762 1784 . + . date=09-11-2021;Target=null 1762 1784;ID=match$39_1762_1784;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 3537 3551 . + . date=09-11-2021;Target=null 3537 3551;ID=match$40_3537_3551;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 2753 2799 . + . date=09-11-2021;Target=null 2753 2799;ID=match$41_2753_2799;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 3502 3704 . + . date=09-11-2021;Target=null 3502 3704;ID=match$42_3502_3704;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 2538 2562 . + . date=09-11-2021;Target=null 2538 2562;ID=match$43_2538_2562;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 520 541 . + . date=09-11-2021;Target=null 520 541;ID=match$44_520_541;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 1520 1558 . + . date=09-11-2021;Target=null 1520 1558;ID=match$45_1520_1558;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 3633 3682 . + . date=09-11-2021;Target=null 3633 3682;ID=match$46_3633_3682;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 3324 3375 . + . date=09-11-2021;Target=null 3324 3375;ID=match$47_3324_3375;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 915 931 . + . date=09-11-2021;Target=null 915 931;ID=match$48_915_931;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 1762 1787 . + . date=09-11-2021;Target=null 1762 1787;ID=match$49_1762_1787;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 1483 1502 . + . date=09-11-2021;Target=null 1483 1502;ID=match$50_1483_1502;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 3504 3532 . + . date=09-11-2021;Target=null 3504 3532;ID=match$51_3504_3532;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 2423 2442 . + . date=09-11-2021;Target=null 2423 2442;ID=match$52_2423_2442;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 1086 1105 . + . date=09-11-2021;Target=null 1086 1105;ID=match$53_1086_1105;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 2235 2261 . + . date=09-11-2021;Target=null 2235 2261;ID=match$54_2235_2261;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 2679 2705 . + . date=09-11-2021;Target=null 2679 2705;ID=match$55_2679_2705;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 2152 2318 . + . date=09-11-2021;Target=null 2152 2318;ID=match$56_2152_2318;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 2152 2200 . + . date=09-11-2021;Target=null 2152 2200;ID=match$57_2152_2200;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf133 MobiDBLite protein_match 2396 2471 . + . date=09-11-2021;Target=null 2396 2471;ID=match$58_2396_2471;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +##sequence-region FUN_000012-T1 1 11934 +FUN_000012-T1 provided_by_user nucleic_acid 1 11934 . + . ID=FUN_000012-T1;Name=FUN_000012-T1;md5=bb41314e271ff246f69dd1a3a2cba23a +FUN_000012-T1_orf304 getorf ORF 1567 2208 . - . Target=pep_FUN_000012-T1_1567_2208_r 1 214;ID=orf_FUN_000012-T1_1567_2208_r;Name=FUN_000012-T1_orf304;md5=bb41314e271ff246f69dd1a3a2cba23a +FUN_000012-T1_orf304 getorf polypeptide 1 214 . + . ID=pep_FUN_000012-T1_1567_2208_r;md5=796ae4d6bd379b343d45415308fabd86 +FUN_000012-T1_orf304 MobiDBLite protein_match 113 138 . + . date=09-11-2021;Target=null 113 138;ID=match$59_113_138;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +##sequence-region FUN_000018-T1 1 1295 +FUN_000018-T1 provided_by_user nucleic_acid 1 1295 . + . ID=FUN_000018-T1;Name=FUN_000018-T1;md5=1e5f0b711475708f1f8b964633355652 +FUN_000018-T1_orf343 getorf ORF 1011 1295 . + . Target=pep_FUN_000018-T1_1011_1295 1 95;ID=orf_FUN_000018-T1_1011_1295;Name=FUN_000018-T1_orf343;md5=1e5f0b711475708f1f8b964633355652 +FUN_000018-T1_orf343 getorf polypeptide 1 95 . + . ID=pep_FUN_000018-T1_1011_1295;md5=3b79c550933dca29ee431283750e0521 +FUN_000018-T1_orf343 MobiDBLite protein_match 39 66 . + . date=09-11-2021;Target=null 39 66;ID=match$60_39_66;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000018-T1_orf343 MobiDBLite protein_match 1 22 . + . date=09-11-2021;Target=null 1 22;ID=match$61_1_22;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000018-T1_orf343 MobiDBLite protein_match 1 95 . + . date=09-11-2021;Target=null 1 95;ID=match$62_1_95;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000018-T1_orf343 MobiDBLite protein_match 70 95 . + . date=09-11-2021;Target=null 70 95;ID=match$63_70_95;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +##sequence-region FUN_000012-T1 1 11934 +FUN_000012-T1 provided_by_user nucleic_acid 1 11934 . + . ID=FUN_000012-T1;Name=FUN_000012-T1;md5=bb41314e271ff246f69dd1a3a2cba23a +FUN_000012-T1_orf20 getorf ORF 1553 2059 . + . Target=pep_FUN_000012-T1_1553_2059 1 169;ID=orf_FUN_000012-T1_1553_2059;Name=FUN_000012-T1_orf20;md5=bb41314e271ff246f69dd1a3a2cba23a +FUN_000012-T1_orf20 getorf polypeptide 1 169 . + . ID=pep_FUN_000012-T1_1553_2059;md5=26b17402a3132f16013f57a340e1455e +FUN_000012-T1_orf20 MobiDBLite protein_match 67 169 . + . date=09-11-2021;Target=null 67 169;ID=match$64_67_169;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf20 MobiDBLite protein_match 142 169 . + . date=09-11-2021;Target=null 142 169;ID=match$65_142_169;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf20 MobiDBLite protein_match 72 108 . + . date=09-11-2021;Target=null 72 108;ID=match$66_72_108;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +##sequence-region FUN_000018-T1 1 1295 +FUN_000018-T1 provided_by_user nucleic_acid 1 1295 . + . ID=FUN_000018-T1;Name=FUN_000018-T1;md5=1e5f0b711475708f1f8b964633355652 +FUN_000018-T1_orf337 getorf ORF 338 733 . + . Target=pep_FUN_000018-T1_338_733 1 132;ID=orf_FUN_000018-T1_338_733;Name=FUN_000018-T1_orf337;md5=1e5f0b711475708f1f8b964633355652 +FUN_000018-T1_orf337 getorf polypeptide 1 132 . + . ID=pep_FUN_000018-T1_338_733;md5=e1712547dc145b28c8846d277417cf4d +FUN_000018-T1_orf337 MobiDBLite protein_match 17 78 . + . date=09-11-2021;Target=null 17 78;ID=match$67_17_78;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000018-T1_orf337 MobiDBLite protein_match 20 66 . + . date=09-11-2021;Target=null 20 66;ID=match$68_20_66;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +##sequence-region FUN_000018-T1 1 1295 +FUN_000018-T1 provided_by_user nucleic_acid 1 1295 . + . ID=FUN_000018-T1;Name=FUN_000018-T1;md5=1e5f0b711475708f1f8b964633355652 +FUN_000018-T1_orf357 getorf ORF 260 475 . - . Target=pep_FUN_000018-T1_260_475_r 1 72;ID=orf_FUN_000018-T1_260_475_r;Name=FUN_000018-T1_orf357;md5=1e5f0b711475708f1f8b964633355652 +FUN_000018-T1_orf357 getorf polypeptide 1 72 . + . ID=pep_FUN_000018-T1_260_475_r;md5=aafbe3c8b4e6aa9c5ae6f9f19b280990 +FUN_000018-T1_orf357 MobiDBLite protein_match 38 72 . + . date=09-11-2021;Target=null 38 72;ID=match$69_38_72;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000018-T1_orf357 MobiDBLite protein_match 1 20 . + . date=09-11-2021;Target=null 1 20;ID=match$70_1_20;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +##sequence-region FUN_000018-T1 1 1295 +FUN_000018-T1 provided_by_user nucleic_acid 1 1295 . + . ID=FUN_000018-T1;Name=FUN_000018-T1;md5=1e5f0b711475708f1f8b964633355652 +FUN_000018-T1_orf342 getorf ORF 1 1293 . + . Target=pep_FUN_000018-T1_1_1293 1 431;ID=orf_FUN_000018-T1_1_1293;Name=FUN_000018-T1_orf342;md5=1e5f0b711475708f1f8b964633355652 +FUN_000018-T1_orf342 getorf polypeptide 1 431 . + . ID=pep_FUN_000018-T1_1_1293;md5=5ca2cbf7936c8539c0f5b069cce1b285 +FUN_000018-T1_orf342 MobiDBLite protein_match 375 431 . + . date=09-11-2021;Target=null 375 431;ID=match$71_375_431;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000018-T1_orf342 MobiDBLite protein_match 1 25 . + . date=09-11-2021;Target=null 1 25;ID=match$72_1_25;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000018-T1_orf342 MobiDBLite protein_match 1 16 . + . date=09-11-2021;Target=null 1 16;ID=match$73_1_16;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +##sequence-region FUN_000012-T1 1 11934 +FUN_000012-T1 provided_by_user nucleic_acid 1 11934 . + . ID=FUN_000012-T1;Name=FUN_000012-T1;md5=bb41314e271ff246f69dd1a3a2cba23a +FUN_000012-T1_orf18 getorf ORF 1296 1856 . + . Target=pep_FUN_000012-T1_1296_1856 1 187;ID=orf_FUN_000012-T1_1296_1856;Name=FUN_000012-T1_orf18;md5=bb41314e271ff246f69dd1a3a2cba23a +FUN_000012-T1_orf18 getorf polypeptide 1 187 . + . ID=pep_FUN_000012-T1_1296_1856;md5=a35b46a97905a750e8fc70890d827e9b +FUN_000012-T1_orf18 MobiDBLite protein_match 1 57 . + . date=09-11-2021;Target=null 1 57;ID=match$74_1_57;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf18 MobiDBLite protein_match 98 138 . + . date=09-11-2021;Target=null 98 138;ID=match$75_98_138;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +FUN_000012-T1_orf18 MobiDBLite protein_match 25 47 . + . date=09-11-2021;Target=null 25 47;ID=match$76_25_47;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +##sequence-region FUN_000018-T1 1 1295 +FUN_000018-T1 provided_by_user nucleic_acid 1 1295 . + . ID=FUN_000018-T1;Name=FUN_000018-T1;md5=1e5f0b711475708f1f8b964633355652 +FUN_000018-T1_orf339 getorf ORF 678 992 . + . Target=pep_FUN_000018-T1_678_992 1 105;ID=orf_FUN_000018-T1_678_992;Name=FUN_000018-T1_orf339;md5=1e5f0b711475708f1f8b964633355652 +FUN_000018-T1_orf339 getorf polypeptide 1 105 . + . ID=pep_FUN_000018-T1_678_992;md5=477d6280d797e71d06bba76c8f4b0a95 +FUN_000018-T1_orf339 MobiDBLite protein_match 1 20 . + . date=09-11-2021;Target=null 1 20;ID=match$77_1_20;signature_desc=consensus disorder prediction;Name=mobidb-lite;status=T +##FASTA +>pep_FUN_000012-T1_1296_1856 +HCGMGLSQSMQRLDDPFSDEEGSGYLGSPTRQSYRPHAFSSHSSPGGDLSDEELCSGLAN +LPGGSGMLGGGGGTATPLGSGYGQTEFEPLTFAPGTAVVDFAQSQQPPPTARSRSGSCAS +RRSQYSSSASTRPAAAPTTTLCTAPAQWFVRWISTALWSWRRRRRIRELRTRRRRRGSLW +GRRRRRN +>pep_FUN_000012-T1_1553_2059 +IRTAHFRPRDRSRGLRPVTAATTNSAVPIRLVCIQAITIQLISINTPSSSTNHNTMHSTS +TVVRSVDLNSSMELEEEAEDPGTADTEEEEGEPVGEEEEEELVEEEVDSDLTASTINRET +MGAASAAAASASALGSGLASAHRPQLRSQESHACSTTPMPTRPKLKRTT +>pep_FUN_000012-T1_1567_2208_r +LGFAIYSGIYVVAFVKIEVLAIRDLVLLVCRAVKVRILVVPHVVDIGVDYVVRFSFGRVG +IGVVEHAWDSCDRSCGRWALAKPEPKAEADAAAAEAAPIVSRLMVDAVKSESTSSSTNSS +SSSSPTGSPSSSSVSAVPGSSASSSNSIELLRSTERTTVLVLCIVLWLVLLLGVLMLMSC +IVIAWMHTSRIGTALLVVAAVTGRSPRLRSLGRK +>pep_FUN_000012-T1_1_11931 +MSLADMGTASRSAGGEGGRHYDLATGGAGSGGHPVGGGLPGGRMTHSLSTPSGVDGTPST +PRHRGGKKLTVRIQMLDDSITMFQVQAKALGRVLFEQVCRQLNLLEADYFGLEYQEVSTH +TKYWLDLEKPMNRQVGLSLIDPVLRFCIKFYTPDPAQLEEEYTRYLFCLQIKRDLATGSL +QCNDNTAALMASYIVQASCGDFVPEDYPDHTYLSSYRFVPNQDATMQRKIMENHKKHVGQ +SPAEADLNLLETARRCELYGMKMHPAKDVEGVPLNLAVAHMGITVFQNITRINTFSWAKI +RKISFKRKRFLVKLHPEGYGYYKDTVEFFFEGRNECKNFWKKCVENHGFFRCTAVQNTPR +RKTRVLSRGSSFRYSGKTQKQIIEFVRENYVKRQNFQRSQSFRQGPLNASSRSQSHTYVN +SSISANPLLPIDTAAWDYRNQCSDSMTPSLTKKAADTLDRRRDNPIGHMRSQVTAAQVEI +YQTKNYAADSPTSQEEAECSAAGAERQHHSAVAMDKLNSNRSLSPQGPQSWTSPSHSSHH +QQRGPDPARVHPGDHNTAHQHQHAQQQHQPQHYAQHQHSGSFGGSQQLYGVGGGGGGSGN +CGHGGGGGGACGGGGGGGISRGGSGFGLDGIYHQSGDYGGSLSGGSIGLGFGLGLGQCPS +SAASVTGVPCMLNNANANSTETETDNIIYTDINDMGHYKYPDFHSSAHQEHKISNSEHLN +LNERNDIYATVNRKAKSKIREKHFSDEFIDQSILQYTRAKQMGLSQVPVLLQQPSTSAYA +AALQERSYNSGSYQYHNDLNHPSESSSSSYFGTGFGTKRYGQSERTKLAQSENYLTPSLD +SQSSRHTHSLPRNSELSGVDSVDSYDSHYITHHSVGILPPGHLSSSSEKLDFQLPSGNLY +STTQFVKPEDASAHYMEDEEEEEEDEGENIYDQVERDSWLKSSSCKDLFERYSSTYYDRE +HSKPMTAFDKEFLSSNRIDSPVTRYDDSRHSLYVAKNHSIDAHQGFSPLPQSKVYSSSYP +GSTYNTQEHKRQHGHHMDYSGSQDDISQDSYELLEKYDIDFFGGRGRSEDHMRSCSLDSG +NYIPSDDESVSEGHQQHKYRSEMDVKSKSAADIMNEIWDAEDPRYLPREKLSVKSDGNFY +KKIQEALISAFRRRSDSENIFSFDQDRIECIQKYTKQWEGQQPKDEKSKQSPEYPLTPEL +VSEFEKQQARLMAHQKITRKEELIAKTHFEEYNPIMVPLNYSSHATVERTKSDPNSLANR +ARLGSNSRRHVLMHQKSIDLTPADSNSSDEDYIYKQIPSAPPLCKAHGNFEIPKCYDGSA +ASQIAQELPKTGFELPKSFFRDYERRFTKVLKEDIPYVLHKRHIMNGTAPSPSEKKHTKP +KSPKSPKSPKSPKSPKSPKSPKASSGGLGPGSTDFLPDILDSLLPSDTKEFLFTQNIDLS +KVDPITLEIDKTIPTIHLSSPKRDITKQMDASTLEKLNKKLSQIESDSATSSRTESMQQQ +KLEQKQMELIQSLRKELQANARKANKPRVIPKTKSAGKSKKGKTRITSFSSDDESLDSDD +VFGSAEAIPDRLEFSPPQSRKEIESILRIEQSRLISAAWGRGQTMSSTEIEGSPPQCRRL +ADLESRYHTQKLDPQYANATELRRISERSISIPSSEDEPHMPMRGRIDECTNDYQRNENI +PSPILEHAEFFRSNDDIYETCHEERITGSDIDYTLKKQTSSGSKSKVKLIEEIIDSSIVM +RSKGHAPILFAHARLNLSEGSVSLQRQKATQQQSPTTERRTKSLDTPVISLHRLPPMNAF +SSKDDTVGFEEEAEILEEKSLERENQATAQDEDTADSIHSCAGSIPTQSSYQTNGRDSLL +SAVSIDTEEAELLNQLRYIEKIALQGVKIKDKKKSKMKLRSGDHLILNIPKYRFTDWSPY +SSANSSRKTSPGVSRASSIESTGKGKLKTSEPYKGKPVSRSRPESRRTSADDIKARDGRG +SKKSSPKERPRSIEMRRLSKDKSKSQEETEADIAKRKERQQKLYESAMKQTITMLSPVKD +TLPAFPAPGDKILVKTDGDKIIIETEFKSKAEDHVLIAKSPRKLDNSLVKFSRSFDEGRS +PDKLDKANRSFEDRNKSFEDSEKSDAPEDMLIKSPKKIAKAQELKQKIEGSVVHKKIDGK +SSSLERPAEHHYLGPDVKARSLDDKRQATEAAKKNEEKPAPVVRSAIGDQRRSLEILKRS +LPSEDARDSEGAFSRKPSTAESLDSYVSVDESHSAASKSPVPGTGGGTEGYPHRVPTIEC +EEPSIEEDENSSERRHLKVGGQDTNRLSLDRSRSDETGSWMTVECDEFIGSDTSDNEPRT +LEPDRNVLETQATLEDANPLEYSNCATPTSDLNILLTPPNASPQIEKSVLETFEKYTGSS +DTGKKKNTLDKQSDRSKSSDSWTSGEKDTSPQRQQDWSLSVGKEKSSVEEESSVSCSIAR +PLGISQDFGKEEARKCQELKQRMLQLEVGKEEITPTPSNEQTPTNEPKILVSKKPSTPTL +EKQSPIDLGTSTESYLEPIEERIAKILDRGGARTEDSESSSGGSRKPPRIEKPARANAGK +KLSVTRADAGKSGSDRSSQESKSSFDSKGSLSVESRGSFETESSSGSLGAAQRRGELAQK +EQQSTWRPFPIESSNSSSTDDPWHHVETDGGYERYDAQNPLRDSSDSDVKEASPDDQKDA +SDASYQDELNDFPATFGYPAMTSSLGGIGVNPTDIIGYSTGFTLGRTLSRISERSTASEK +SSMEDDVSKASTHSVSMRDESVGSTDHQPSLSSDSRSNTNLAYISDADRRTSAEMPEIPC +DSATGDRLSSFGSLNEPKSPTLVTGRFSVTHVDEQQGDDVERHTLMCLSNAGSQDSEDWP +LPEIPFDHVPVKPADSLYAMPDLDKPVPKSFCWKASLSFQQSQDSLDWPSPPSSAIGAPI +IVENIETYYASEVQSADKVILDEEMAVGPPDVAKVLPYEDTAYLMSAAFDDNDFGNEQLQ +PDTVSCLSSTLSAASCLSSSLNVSCTTSSTQATARALRKNSSPEVIVAQPTRSPAPRSPL +SEDELFSSDDVFMPGTIKVQLSPDAQLRKLSKGSNNSDTSIDDILSGSTTYLEDQTTVRK +NYEARLSSGGGGASCKKCSHSSHSEEETSSLGTDLDGTVRMGGLQQKKCTHSSHSEDTSI +GLSISEWSTGTNTVRQYANLSGSDSLSAVSTHSCAKSEKSNQTKSSISSINKSAESLNEQ +SGGSSFSHKFSGDNGSSDGLRYDMLSNSETDKLSEATSATRSDDTTLTLTEMAHTISEWS +TSSSRTLVGVAPGEYLPLKQALSGNKTSLSSPSEEKRCALPQVHRRSGSNGNQARAAQEH +ADSQTGPETSAAARKRRSLEMMSKLYQSQEICSESESPFVERLYAHSEKLTERYQSQEFV +PLHGGPPASHLASSTTSQIQTQQPQQVRQKPRAPQPPTKPKPAVTRPIMQALLNKMKQPG +LAEQAAEAAEAEEKKAMIAASAVAAKPPPPPVPTVPPIVTPSDLPGDAVAPPPKPLAKHH +SYDDRTLSKTQIREFKTTSKQLRQSSSFHEHMLSKSQQSSQELPMRIDEERDPHSTSSAT +NTTTTTNTLNSESTEPNSPQMPQRADKLVRCSPYYSSSLSSESPPNQLLQKPPRKTATQL +SAGAVAASLKSPPSGNDTDSSLDVRGQEAKMRSRGYRKKRQLPVKRMRANLTAAALLEQA +ESSECSEGYVPEVDSGSSEYSSCQRDDQYLEFDEELERDQTDDYEDYPQYSGKFESLDMS +DNVDEMGFPRYDRLSHITKPMYHQALVMERPNPVQLPAPANHPMPPATGQPVKPARTKKR +QFKREDSTAAGTSGHSTAAPQVRPYHGRSYCNPEESEYETRGGGLSDELANSSEDSCSGF +GGDAGASGSGTIRRGTTKGAGQDQEQGTGGQARHVPYPDFLSDYESEPIEYERYACGLDI +RVDPPPKFHDSDELSDQ +>pep_FUN_000018-T1_1011_1295 +GWPATQQHQAGCQASSIGQHGASYAALSRAPARSSWRGGGDRGRSEGRGANANHWRDGED +ERGRSCWRTGSIWSGLTRPGSPRSTVSFSESNSQR +>pep_FUN_000018-T1_1_1293 +MPPTINNSAVNSAAEKRPQRQTERKSEIICRVKYGNNLPDIPFDLKFLQYPFDSHRFVQY +NPTSLERNFKYDVLTEHDLGVTVDLINRELYQADSMTLLDPADEKLLEEETLTPTDSVRS +RQHSRTVSWLRKSEYISTEQTRFQPQNLENIEAKVGYNVKKSLREETLYLDREAQIKAIE +KTFSDTKSEITKHYSKPNVVPVEVLPIFPDFTNWKFPCAQVIFDSDPAPAGKNVPAQLEE +MSQAMIRGVMDESGEQFVAYFLPTEQTLEKRRTDFINGELYKEEEEYEYKIAREYNWNVK +TKASKGYEENYFFVMRQDGIYYNELETRVRLNKRRVKVGQQPNNTKLVVKHRPLDSMEHR +MQRYRERQLEVPGEEEEIVEEVREEEQMQIIGETEKTSEDAAVGAQAASGADSPAQVARD +RQSRSRSRTRS +>pep_FUN_000018-T1_260_475_r +RCNRPWPRCSPGSGAGSASARWRCTRICATMTPSSNAGANAQSLWASESPPPAVFHRRGP +AASWSRPDRAPG +>pep_FUN_000018-T1_312_668 +KTAGGGDSDAHRLCAFAPAFEDGVMVAQIRVHLHRADALPAPEPGEHRGQGRLQRQEVAS +GGDSLPGPRSPDQSHREDLQRHQERNYQALFQAQCGASGGTAYLPRLHQLEVPVRPGHI +>pep_FUN_000018-T1_338_733 +RPQTLCVRASIRGRCHGCANPSTSPPSRRASSPRTWRTSRPRSVTTSRSRFGRRLSTWTA +KPRSKPSRRPSATPRAKLPSTIPSPMWCQWRYCLSSPTSPTGSSRAPRSYLTVIPLLRAR +TCPPSWRRCRRP +>pep_FUN_000018-T1_678_992 +SRSCGQERARPAGGDVAGHDSWCDGRERRTVCRLLPAHRADAGETPYRLHQWRAVQGGGG +VRVQDRSRVQLEREDQSFQGLRRKLLLRDASGRHLLQRARNPCAP +>match$1_70_84 +SPDQSHREDLQRHQE +>match$2_37_53 +DALPAPEPGEHRGQGRL +>match$3_37_87 +DALPAPEPGEHRGQGRLQRQEVASGGDSLPGPRSPDQSHREDLQRHQERNY +>match$4_1090_1105 +VSEGHQQHKYRSEMDV +>match$5_1527_1541 +PRVIPKTKSAGKSKK +>match$6_912_931 +SAHYMEDEEEEEEDEGENIY +>match$7_559_581 +HQHQHAQQQHQPQHYAQHQHSGS +>match$8_1920_2025 +YSSANSSRKTSPGVSRASSIESTGKGKLKTSEPYKGKPVSRSRPESRRTSADDIKARDGR +GSKKSSPKERPRSIEMRRLSKDKSKSQEETEADIAKRKERQQKLYE +>match$9_3426_3463 +PPASHLASSTTSQIQTQQPQQVRQKPRAPQPPTKPKPA +>match$10_3552_3583 +IREFKTTSKQLRQSSSFHEHMLSKSQQSSQEL +>match$11_3910_3929 +GTIRRGTTKGAGQDQEQGTG +>match$12_3429_3449 +SHLASSTTSQIQTQQPQQVRQ +>match$13_2398_2422 +GSSDTGKKKNTLDKQSDRSKSSDSW +>match$14_836_859 +TPSLDSQSSRHTHSLPRNSELSGV +>match$15_3812_3938 +NPVQLPAPANHPMPPATGQPVKPARTKKRQFKREDSTAAGTSGHSTAAPQVRPYHGRSYC +NPEESEYETRGGGLSDELANSSEDSCSGFGGDAGASGSGTIRRGTTKGAGQDQEQGTGGQ +ARHVPYP +>match$16_1920_1945 +YSSANSSRKTSPGVSRASSIESTGKG +>match$17_2590_2630 +GKSGSDRSSQESKSSFDSKGSLSVESRGSFETESSSGSLGA +>match$18_1362_1410 +RHIMNGTAPSPSEKKHTKPKSPKSPKSPKSPKSPKSPKSPKASSGGLGP +>match$19_2492_2531 +EITPTPSNEQTPTNEPKILVSKKPSTPTLEKQSPIDLGTS +>match$20_3596_3621 +TSSATNTTTTTNTLNSESTEPNSPQM +>match$21_2757_2773 +ASEKSSMEDDVSKASTH +>match$22_3213_3252 +SCAKSEKSNQTKSSISSINKSAESLNEQSGGSSFSHKFSG +>match$23_3133_3158 +ASCKKCSHSSHSEEETSSLGTDLDGT +>match$24_3040_3060 +NSSPEVIVAQPTRSPAPRSPL +>match$25_1947_2024 +LKTSEPYKGKPVSRSRPESRRTSADDIKARDGRGSKKSSPKERPRSIEMRRLSKDKSKSQ +EETEADIAKRKERQQKLY +>match$26_2774_2799 +SVSMRDESVGSTDHQPSLSSDSRSNT +>match$27_3345_3371 +RRSGSNGNQARAAQEHADSQTGPETSA +>match$28_486_508 +YAADSPTSQEEAECSAAGAERQH +>match$29_447_467 +TPSLTKKAADTLDRRRDNPIG +>match$30_3718_3778 +EQAESSECSEGYVPEVDSGSSEYSSCQRDDQYLEFDEELERDQTDDYEDYPQYSGKFESL +D +>match$31_2488_2710 +VGKEEITPTPSNEQTPTNEPKILVSKKPSTPTLEKQSPIDLGTSTESYLEPIEERIAKIL +DRGGARTEDSESSSGGSRKPPRIEKPARANAGKKLSVTRADAGKSGSDRSSQESKSSFDS +KGSLSVESRGSFETESSSGSLGAAQRRGELAQKEQQSTWRPFPIESSNSSSTDDPWHHVE +TDGGYERYDAQNPLRDSSDSDVKEASPDDQKDASDASYQDELN +>match$32_49_68 +STPSGVDGTPSTPRHRGGKK +>match$33_2211_2234 +RRSLEILKRSLPSEDARDSEGAFS +>match$34_520_581 +NRSLSPQGPQSWTSPSHSSHHQQRGPDPARVHPGDHNTAHQHQHAQQQHQPQHYAQHQHS +GS +>match$35_2095_2134 +FDEGRSPDKLDKANRSFEDRNKSFEDSEKSDAPEDMLIKS +>match$36_542_558 +QRGPDPARVHPGDHNTA +>match$37_2637_2661 +LAQKEQQSTWRPFPIESSNSSSTDD +>match$38_3816_3830 +LPAPANHPMPPATGQ +>match$39_1762_1784 +VSLQRQKATQQQSPTTERRTKSL +>match$40_3537_3551 +AKHHSYDDRTLSKTQ +>match$41_2753_2799 +ERSTASEKSSMEDDVSKASTHSVSMRDESVGSTDHQPSLSSDSRSNT +>match$42_3502_3704 +AVAAKPPPPPVPTVPPIVTPSDLPGDAVAPPPKPLAKHHSYDDRTLSKTQIREFKTTSKQ +LRQSSSFHEHMLSKSQQSSQELPMRIDEERDPHSTSSATNTTTTTNTLNSESTEPNSPQM +PQRADKLVRCSPYYSSSLSSESPPNQLLQKPPRKTATQLSAGAVAASLKSPPSGNDTDSS +LDVRGQEAKMRSRGYRKKRQLPV +>match$43_2538_2562 +PIEERIAKILDRGGARTEDSESSSG +>match$44_520_541 +NRSLSPQGPQSWTSPSHSSHHQ +>match$45_1520_1558 +NARKANKPRVIPKTKSAGKSKKGKTRITSFSSDDESLDS +>match$46_3633_3682 +PYYSSSLSSESPPNQLLQKPPRKTATQLSAGAVAASLKSPPSGNDTDSSL +>match$47_3324_3375 +GNKTSLSSPSEEKRCALPQVHRRSGSNGNQARAAQEHADSQTGPETSAAARK +>match$48_915_931 +YMEDEEEEEEDEGENIY +>match$49_1762_1787 +VSLQRQKATQQQSPTTERRTKSLDTP +>match$50_1483_1502 +QIESDSATSSRTESMQQQKL +>match$51_3504_3532 +AAKPPPPPVPTVPPIVTPSDLPGDAVAPP +>match$52_2423_2442 +TSGEKDTSPQRQQDWSLSVG +>match$53_1086_1105 +DDESVSEGHQQHKYRSEMDV +>match$54_2235_2261 +RKPSTAESLDSYVSVDESHSAASKSPV +>match$55_2679_2705 +NPLRDSSDSDVKEASPDDQKDASDASY +>match$56_2152_2318 +VVHKKIDGKSSSLERPAEHHYLGPDVKARSLDDKRQATEAAKKNEEKPAPVVRSAIGDQR +RSLEILKRSLPSEDARDSEGAFSRKPSTAESLDSYVSVDESHSAASKSPVPGTGGGTEGY +PHRVPTIECEEPSIEEDENSSERRHLKVGGQDTNRLSLDRSRSDETG +>match$57_2152_2200 +VVHKKIDGKSSSLERPAEHHYLGPDVKARSLDDKRQATEAAKKNEEKPA +>match$58_2396_2471 +YTGSSDTGKKKNTLDKQSDRSKSSDSWTSGEKDTSPQRQQDWSLSVGKEKSSVEEESSVS +CSIARPLGISQDFGKE +>match$59_113_138 +TSSSTNSSSSSSPTGSPSSSSVSAVP +>match$60_39_66 +GGDRGRSEGRGANANHWRDGEDERGRSC +>match$61_1_22 +GWPATQQHQAGCQASSIGQHGA +>match$62_1_95 +GWPATQQHQAGCQASSIGQHGASYAALSRAPARSSWRGGGDRGRSEGRGANANHWRDGED +ERGRSCWRTGSIWSGLTRPGSPRSTVSFSESNSQR +>match$63_70_95 +GSIWSGLTRPGSPRSTVSFSESNSQR +>match$64_67_169 +DLNSSMELEEEAEDPGTADTEEEEGEPVGEEEEEELVEEEVDSDLTASTINRETMGAASA +AAASASALGSGLASAHRPQLRSQESHACSTTPMPTRPKLKRTT +>match$65_142_169 +HRPQLRSQESHACSTTPMPTRPKLKRTT +>match$66_72_108 +MELEEEAEDPGTADTEEEEGEPVGEEEEEELVEEEVD +>match$67_17_78 +GCANPSTSPPSRRASSPRTWRTSRPRSVTTSRSRFGRRLSTWTAKPRSKPSRRPSATPRA +KL +>match$68_20_66 +NPSTSPPSRRASSPRTWRTSRPRSVTTSRSRFGRRLSTWTAKPRSKP +>match$69_38_72 +GANAQSLWASESPPPAVFHRRGPAASWSRPDRAPG +>match$70_1_20 +RCNRPWPRCSPGSGAGSASA +>match$71_375_431 +EEEIVEEVREEEQMQIIGETEKTSEDAAVGAQAASGADSPAQVARDRQSRSRSRTRS +>match$72_1_25 +MPPTINNSAVNSAAEKRPQRQTERK +>match$73_1_16 +MPPTINNSAVNSAAEK +>match$74_1_57 +HCGMGLSQSMQRLDDPFSDEEGSGYLGSPTRQSYRPHAFSSHSSPGGDLSDEELCSG +>match$75_98_138 +VVDFAQSQQPPPTARSRSGSCASRRSQYSSSASTRPAAAPT +>match$76_25_47 +YLGSPTRQSYRPHAFSSHSSPGG +>match$77_1_20 +SRSCGQERARPAGGDVAGHD
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/transcript_out/out.json Mon Nov 15 17:53:24 2021 +0000 @@ -0,0 +1,1958 @@ +{ + "interproscan-version": "5.52-86.0", +"results": [ { + "id" : 2, + "sequence" : "atgccacccacgatcaacaattcggcggtaaacagtgccgccgaaaagcgaccccagcggcaaacggagcgcaaatccgagatcatttgccgcgtgaagtatggaaacaacctgccggatataccatttgatctgaagtttctgcagtaccccttcgacagccaccgcttcgtgcagtacaacccaacgtcgctagagcgtaacttcaagtatgacgtgctgacggaacacgatttgggtgtcacggtggacctgattaaccgggagctctatcaggccgactccatgacgctgctggaccccgccgatgaaaaactgctggaggaggagactctgacgcccacagactctgtgcgttcgcgccagcattcgaggacggtgtcatggttgcgcaaatccgagtacatctccaccgagcagacgcgcttccagccccagaacctggagaacatcgaggccaaggtcggttacaacgtcaagaagtcgcttcgggaggagactctctacctggaccgcgaagcccagatcaaagccatcgagaagaccttcagcgacaccaagagcgaaattaccaagcactattccaagcccaatgtggtgccagtggaggtactgcctatcttccccgacttcaccaactggaagttcccgtgcgcccaggtcatatttgacagtgatcccgctcctgcgggcaagaacgtgcccgcccagctggaggagatgtcgcaggccatgattcgtggtgtgatggacgagagcggcgaacagtttgtcgcctacttcctgcccacagagcagacgctggagaaacgccgtacagacttcatcaatggcgagctgtacaaggaggaggaggagtacgagtacaagatcgctcgagagtacaactggaacgtgaagaccaaagcttccaagggctacgaagaaaactacttcttcgtgatgcgtcaggacggcatctactacaacgagctagaaacccgtgtgcgccttaacaagcgtcgcgttaaggttggccagcaacccaacaacaccaagctggttgtcaagcatcgtccattggacagcatggagcatcgtatgcagcgctatcgcgagcgccagctagaagttcctggcgaggaggaggagatcgtggaagaagtgagggaagaggagcaaatgcaaatcattggcgagacggagaagacgagcgaggacgcagctgttggcgcacaggcagcatctggagcggactcacccgcccaggtagcccgcgatcgacagtctcgttctcggagtcgaactcgcagcgg", + "md5" : "1e5f0b711475708f1f8b964633355652", + "crossReferences" : [ { + "name" : "FUN_000018-T1 FUN_000018", + "nucleotideSequence" : 2, + "id" : "FUN_000018-T1" + } ], + "openReadingFrames" : [ { + "id" : 5, + "start" : 385, + "end" : 972, + "strand" : "ANTISENSE", + "protein" : { + "sequence" : "LVVVDAVLTHHEEVVFFVALGSFGLHVPVVLSSDLVLVLLLLLVQLAIDEVCTAFLQRLLCGQEVGDKLFAALVHHTTNHGLRHLLQLGGHVLARRSGITVKYDLGARELPVGEVGEDRQYLHWHHIGLGIVLGNFALGVAEGLLDGFDLGFAVQVESLLPKRLLDVVTDLGLDVLQVLGLEARLLGGDVLGFAQP", + "md5" : "3b7c99de3345df5d6c3300ca9b357d7f", + "matches" : [ ], + "xref" : [ { + "name" : "orf355 source=FUN_000018-T1 coords=972..385 length=196 frame=6 desc=FUN_000018", + "id" : "orf355" + } ] + }, + "nucleotideSequence" : 2 + }, { + "id" : 1, + "start" : 312, + "end" : 668, + "strand" : "SENSE", + "protein" : { + "sequence" : "KTAGGGDSDAHRLCAFAPAFEDGVMVAQIRVHLHRADALPAPEPGEHRGQGRLQRQEVASGGDSLPGPRSPDQSHREDLQRHQERNYQALFQAQCGASGGTAYLPRLHQLEVPVRPGHI", + "md5" : "0b28fe115d4cc09260b038b19fb0b21d", + "matches" : [ { + "signature" : { + "accession" : "mobidb-lite", + "name" : "disorder_prediction", + "description" : "consensus disorder prediction", + "signatureLibraryRelease" : { + "library" : "MOBIDB_LITE", + "version" : "2.0" + }, + "entry" : null + }, + "locations" : [ { + "start" : 70, + "end" : 84, + "location-fragments" : [ { + "start" : 70, + "end" : 84, + "dc-status" : "CONTINUOUS" + } ], + "sequence-feature" : "Polyampholyte" + } ], + "model-ac" : "mobidb-lite" + }, { + "signature" : { + "accession" : "mobidb-lite", + "name" : "disorder_prediction", + "description" : "consensus disorder prediction", + "signatureLibraryRelease" : { + "library" : "MOBIDB_LITE", + "version" : "2.0" + }, + "entry" : null + }, + "locations" : [ { + "start" : 37, + "end" : 53, + "location-fragments" : [ { + "start" : 37, + "end" : 53, + "dc-status" : "CONTINUOUS" + } ], + "sequence-feature" : "Polyampholyte" + } ], + "model-ac" : "mobidb-lite" + }, { + "signature" : { + "accession" : "mobidb-lite", + "name" : "disorder_prediction", + "description" : "consensus disorder prediction", + "signatureLibraryRelease" : { + "library" : "MOBIDB_LITE", + "version" : "2.0" + }, + "entry" : null + }, + "locations" : [ { + "start" : 37, + "end" : 87, + "location-fragments" : [ { + "start" : 37, + "end" : 87, + "dc-status" : "CONTINUOUS" + } ], + "sequence-feature" : "" + } ], + "model-ac" : "mobidb-lite" + } ], + "xref" : [ { + "name" : "orf336 source=FUN_000018-T1 coords=312..668 length=119 frame=3 desc=FUN_000018", + "id" : "orf336" + } ] + }, + "nucleotideSequence" : 2 + }, { + "id" : 6, + "start" : 3, + "end" : 269, + "strand" : "ANTISENSE", + "protein" : { + "sequence" : "SSRLIRSTVTPKSCSVSTSYLKLRSSDVGLYCTKRWLSKGYCRNFRSNGISGRLFPYFTRQMISDLRSVCRWGRFSAALFTAELLIVGG", + "md5" : "4f98ac73a9278ae1c570e9574f94f160", + "matches" : [ ], + "xref" : [ { + "name" : "orf361 source=FUN_000018-T1 coords=269..3 length=89 frame=4 desc=FUN_000018", + "id" : "orf361" + } ] + }, + "nucleotideSequence" : 2 + }, { + "id" : 12, + "start" : 260, + "end" : 475, + "strand" : "ANTISENSE", + "protein" : { + "sequence" : "RCNRPWPRCSPGSGAGSASARWRCTRICATMTPSSNAGANAQSLWASESPPPAVFHRRGPAASWSRPDRAPG", + "md5" : "aafbe3c8b4e6aa9c5ae6f9f19b280990", + "matches" : [ { + "signature" : { + "accession" : "mobidb-lite", + "name" : "disorder_prediction", + "description" : "consensus disorder prediction", + "signatureLibraryRelease" : { + "library" : "MOBIDB_LITE", + "version" : "2.0" + }, + "entry" : null + }, + "locations" : [ { + "start" : 38, + "end" : 72, + "location-fragments" : [ { + "start" : 38, + "end" : 72, + "dc-status" : "CONTINUOUS" + } ], + "sequence-feature" : "" + } ], + "model-ac" : "mobidb-lite" + }, { + "signature" : { + "accession" : "mobidb-lite", + "name" : "disorder_prediction", + "description" : "consensus disorder prediction", + "signatureLibraryRelease" : { + "library" : "MOBIDB_LITE", + "version" : "2.0" + }, + "entry" : null + }, + "locations" : [ { + "start" : 1, + "end" : 20, + "location-fragments" : [ { + "start" : 1, + "end" : 20, + "dc-status" : "CONTINUOUS" + } ], + "sequence-feature" : "" + } ], + "model-ac" : "mobidb-lite" + } ], + "xref" : [ { + "name" : "orf357 source=FUN_000018-T1 coords=475..260 length=72 frame=5 desc=FUN_000018", + "id" : "orf357" + } ] + }, + "nucleotideSequence" : 2 + }, { + "id" : 16, + "start" : 678, + "end" : 992, + "strand" : "SENSE", + "protein" : { + "sequence" : "SRSCGQERARPAGGDVAGHDSWCDGRERRTVCRLLPAHRADAGETPYRLHQWRAVQGGGGVRVQDRSRVQLEREDQSFQGLRRKLLLRDASGRHLLQRARNPCAP", + "md5" : "477d6280d797e71d06bba76c8f4b0a95", + "matches" : [ { + "signature" : { + "accession" : "mobidb-lite", + "name" : "disorder_prediction", + "description" : "consensus disorder prediction", + "signatureLibraryRelease" : { + "library" : "MOBIDB_LITE", + "version" : "2.0" + }, + "entry" : null + }, + "locations" : [ { + "start" : 1, + "end" : 20, + "location-fragments" : [ { + "start" : 1, + "end" : 20, 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+ }, { + "signature" : { + "accession" : "mobidb-lite", + "name" : "disorder_prediction", + "description" : "consensus disorder prediction", + "signatureLibraryRelease" : { + "library" : "MOBIDB_LITE", + "version" : "2.0" + }, + "entry" : null + }, + "locations" : [ { + "start" : 1, + "end" : 22, + "location-fragments" : [ { + "start" : 1, + "end" : 22, + "dc-status" : "CONTINUOUS" + } ], + "sequence-feature" : "Polar" + } ], + "model-ac" : "mobidb-lite" + }, { + "signature" : { + "accession" : "mobidb-lite", + "name" : "disorder_prediction", + "description" : "consensus disorder prediction", + "signatureLibraryRelease" : { + "library" : "MOBIDB_LITE", + "version" : "2.0" + }, + "entry" : null + }, + "locations" : [ { + "start" : 1, + "end" : 95, + "location-fragments" : [ { + "start" : 1, + "end" : 95, + "dc-status" : "CONTINUOUS" + } ], + "sequence-feature" : "" + } ], + "model-ac" : "mobidb-lite" + }, { + "signature" : { + "accession" : "mobidb-lite", + "name" : 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</protein> + </orf> + <orf end="1295" start="1011" strand="SENSE"> + <protein> + <sequence md5="3b79c550933dca29ee431283750e0521">GWPATQQHQAGCQASSIGQHGASYAALSRAPARSSWRGGGDRGRSEGRGANANHWRDGEDERGRSCWRTGSIWSGLTRPGSPRSTVSFSESNSQR</sequence> + <xref id="orf343" name="orf343 source=FUN_000018-T1 coords=1011..1295 length=95 frame=3 desc=FUN_000018"/> + <matches> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polyampholyte" start="39" end="66"> + <location-fragments> + <mobidblite-location-fragment start="39" end="66" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polar" start="1" end="22"> + <location-fragments> + <mobidblite-location-fragment start="1" end="22" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="1" end="95"> + <location-fragments> + <mobidblite-location-fragment start="1" end="95" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polar" start="70" end="95"> + <location-fragments> + <mobidblite-location-fragment start="70" end="95" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + </matches> + </protein> + </orf> + <orf end="733" start="338" strand="SENSE"> + <protein> + <sequence md5="e1712547dc145b28c8846d277417cf4d">RPQTLCVRASIRGRCHGCANPSTSPPSRRASSPRTWRTSRPRSVTTSRSRFGRRLSTWTAKPRSKPSRRPSATPRAKLPSTIPSPMWCQWRYCLSSPTSPTGSSRAPRSYLTVIPLLRARTCPPSWRRCRRP</sequence> + <xref id="orf337" name="orf337 source=FUN_000018-T1 coords=338..733 length=132 frame=2 desc=FUN_000018"/> + <matches> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="17" end="78"> + <location-fragments> + <mobidblite-location-fragment start="17" end="78" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polar" start="20" end="66"> + <location-fragments> + <mobidblite-location-fragment start="20" end="66" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + </matches> + </protein> + </orf> + <orf end="1293" start="1" strand="SENSE"> + <protein> + <sequence md5="5ca2cbf7936c8539c0f5b069cce1b285">MPPTINNSAVNSAAEKRPQRQTERKSEIICRVKYGNNLPDIPFDLKFLQYPFDSHRFVQYNPTSLERNFKYDVLTEHDLGVTVDLINRELYQADSMTLLDPADEKLLEEETLTPTDSVRSRQHSRTVSWLRKSEYISTEQTRFQPQNLENIEAKVGYNVKKSLREETLYLDREAQIKAIEKTFSDTKSEITKHYSKPNVVPVEVLPIFPDFTNWKFPCAQVIFDSDPAPAGKNVPAQLEEMSQAMIRGVMDESGEQFVAYFLPTEQTLEKRRTDFINGELYKEEEEYEYKIAREYNWNVKTKASKGYEENYFFVMRQDGIYYNELETRVRLNKRRVKVGQQPNNTKLVVKHRPLDSMEHRMQRYRERQLEVPGEEEEIVEEVREEEQMQIIGETEKTSEDAAVGAQAASGADSPAQVARDRQSRSRSRTRS</sequence> + <xref id="orf342" name="orf342 source=FUN_000018-T1 coords=1..1293 length=431 frame=1 desc=FUN_000018"/> + <matches> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="375" end="431"> + <location-fragments> + <mobidblite-location-fragment start="375" end="431" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="1" end="25"> + <location-fragments> + <mobidblite-location-fragment start="1" end="25" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polar" start="1" end="16"> + <location-fragments> + <mobidblite-location-fragment start="1" end="16" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + </matches> + </protein> + </orf> + </nucleotide-sequence> + <nucleotide-sequence> + <sequence md5="bb41314e271ff246f69dd1a3a2cba23a">atgtccctggccgacatgggcacagcctctcgatccgccggcggagaaggtggtagacactatgatctagccacgggcggagctggaagtgggggtcatccagtgggcggcggtctgcccggaggccgcatgacgcactccctcagcactccttccggggtggatggcacgccctccacaccccgacatcgcggcggcaaaaagctgactgttcgcatccagatgctggacgactcgatcaccatgttccaagtacaggctaaagcactgggccgcgtgctgtttgaacaggtatgccgtcagctgaatttactggaggccgactacttcggcttggagtaccaggaagtctccacacataccaaatactggctggatctggagaagccaatgaaccgccaggtgggcctctctcttatcgatccagtgctgcgcttctgcatcaagttctatacacccgatccagcgcaattggaagaggagtacaccaggtatttgttctgcttgcaaatcaaacgagacctggccacaggcagtctgcagtgcaacgataacacggcggccttaatggcaagctacattgtacaggcgtcatgcggcgacttcgttccggaggattatcccgaccatacttatctgtcctcgtatcgctttgtgcccaaccaggacgccaccatgcagcgaaagattatggagaaccacaaaaagcatgttggtcaatccccggcggaggcggaccttaacctcttggagacggctcggaggtgtgagctgtatggcatgaaaatgcatccggcgaaggatgtggaaggggtgccgcttaatctggctgtggcccacatgggcatcacagtcttccagaacatcacgcggatcaacaccttctcgtgggctaagatacgcaagatttctttcaagcgcaagcgattcctggtcaaactgcatccggagggatatggatattacaaggataccgtggagttcttcttcgagggtcgcaacgagtgcaaaaacttctggaaaaaatgcgtcgaaaatcacggattcttccgatgcactgccgtacaaaatacgcccaggcgcaaaactcgcgttctctcgcggggtagttcattccgctatagcggaaaaacccagaagcagattatcgagttcgttcgcgaaaattatgtgaagcgccaaaacttccaaaggtctcagtcattccggcaagggccactgaatgctagtagccgaagtcaatcgcatacgtatgtgaattccagcatttcagccaatccccttctcccaattgacactgcggcatgggactatcgcaatcaatgcagcgactcgatgaccccttctctgacgaagaaggcagcggataccttggatcgccgacgcgacaatcctatcggccacatgcgttctcaagtcacagcagcccaggtggagatctatcagacgaagaactatgcagcggactcgccaacctcccaggaggaagcggaatgctcggcggcgggggcggaacggcaacaccactcggcagtggctatggacaaactgaattcgaaccgctcactttcgccccagggaccgcagtcgtggacttcgcccagtcacagcagccaccaccaacagcgcggtcccgatccggctcgtgtgcatccaggcgatcacaatacagctcatcagcatcaacacgcccagcagcagcaccaaccacaacactatgcacagcaccagcacagtggttcgttcggtggatctcaacagctctatggagttggaggaggaggcggaggatccgggaactgcggacacggaggaggaggagggggagcctgtgggggaggaggaggaggaggaattagtcgaggaggaagtggattcggacttgacggcatctaccatcaatcgggagactatgggggcagcctcagcggcggcagcatcggcctcggctttgggctcgggcttggccagtgcccatcgtccgcagcttcggtcacaggagtcccatgcatgctcaacaacgccaatgccaactcgaccgaaactgaaacggacaacataatctacaccgatatcaacgacatggggcactacaagtatccggactttcacagctctgcacaccaggagcacaagatctcgaatagcgagcacctcaatcttaacgaacgcaacgacatatatgccactgtaaatcgcaaagccaagtcaaagattcgagagaagcattttagcgatgagttcatcgatcagtctatactccagtacacgagggccaagcaaatgggactgagtcaagttcctgttctcctgcaacaaccaagcacctctgcctatgcggctgcccttcaagaaagaagttacaacagcggaagttaccagtatcataacgatctgaatcacccctcagagtcctcatcctcctcctactttgggactggattcggcactaagcggtatggtcagagcgagcgaaccaagcttgcccaatctgaaaattacctgacgccttctctggactcgcaaagttcccggcacactcactcacttccccggaactcggagttgtctggagttgattcagtagattcgtacgacagccactacatcacccatcattcagtaggaattcttccccccggtcatctgtcttcttcgtcagagaaacttgatttccagttaccctctggtaatctctattcaacgactcaatttgtcaagcctgaagatgcttctgcccactacatggaagatgaagaggaagaagaggaagatgaaggcgagaatatttacgaccaggtggagcgtgattcgtggctgaagagtagctcttgcaaagatctcttcgagcgctacagtagcacatactacgatcgagagcattctaagccaatgactgcatttgacaaagagtttctttcctccaatcgtattgactcgccagtgacgcgatacgacgattcccgtcactcattgtatgtggccaaaaaccactcgatcgatgcgcaccaaggcttctctccattgccgcagagcaaggtgtactcatccagttatcctggcagtacttacaatacccaggagcacaagcgccagcatggtcaccatatggactattcaggttcgcaagacgacatctcgcaggacagttacgaacttctggagaagtacgatattgacttctttggaggacgtggccgctccgaggaccacatgcgctcttgttcgcttgattcgggcaactacattccgagcgacgacgagtcggtatccgagggccatcagcagcacaagtaccgctcggaaatggacgtcaagtcaaagtcagcagcggatattatgaatgaaatttgggatgctgaggatccacgctatctgccgcgcgagaagctgtctgtcaagtcagatgggaacttctacaagaagattcaggaggctctgatctctgctttccgtcggcgatctgatagtgagaatatcttcagcttcgaccaggatcgcattgagtgcatccaaaagtacaccaaacagtgggagggtcagcagcccaaggacgaaaagagcaagcagagtccggagtatccactcactcccgaacttgtgtcggagtttgagaagcagcaggcgcgcctaatggcccaccaaaagataacacgtaaggaggagctaattgccaaaacgcactttgaggaatataaccccattatggtgccacttaattactcttctcatgctacggtggagcgcaccaaaagcgatccgaactcgctggccaaccgtgctcgtttaggaagtaattctcgccggcatgtgcttatgcatcagaagtctattgacttaacccccgcagactcgaactccagcgatgaggattacatctacaaacagataccgagtgctccacctctttgcaaagcacacggcaattttgaaattcccaagtgctacgatggaagtgctgcatcgcaaatcgctcaggaactgccaaagacaggctttgagcttccgaagagctttttcagagattacgaaaggcgtttcacaaaagtgttaaaggaggatattccctatgtgctccacaagcgccacatcatgaacggaacagctccttcgccaagcgaaaagaaacacactaagcccaagtctccaaaatcgccaaaatcccccaagtcacctaaatctccgaaatcccctaaatcgccaaaggctagttccggtggtctgggacctggctctacagattttctgcctgatattctcgacagtctcttgccttcagacaccaaagaatttcttttcacccaaaacattgacctttcgaaggtggacccaatcactttggagatcgacaagaccataccgacaattcatttgtcttcaccgaaacgggacatcacaaagcagatggatgcctcaacgctggagaaactgaataaaaagctcagtcagatcgaaagcgattcagcaaccagttcgcgaaccgagagcatgcagcagcaaaagctggagcaaaaacagatggagctcattcaaagtcttcgcaaggagctccaggccaacgctcgaaaagctaataagccaagggttattcctaagaccaagtcggctgggaaatcaaagaaaggcaaaactcgaatcacctccttctcctccgatgacgaaagcttggactcggatgatgtatttggttcagcggaggccattcccgaccgcttggagttctcgccaccgcagtcccgcaaggagatcgagtccattctacgcatcgagcaaagcaggcttatatcggcggcgtggggtcgtggacaaacaatgagctccacagagattgagggatctccccctcagtgtaggcgccttgctgatctggagagtcggtaccacacccaaaaactagaccctcagtatgccaatgctactgaattacgacgaatctcagagcgctctatttcaataccttcgtcggaggacgaaccccatatgcccatgcgaggacgtattgacgagtgcacgaatgactatcagaggaacgaaaacattccttcacctatattagagcatgcggaatttttccgtagtaacgacgatatatatgaaacttgccacgaagagcgaattacgggctccgacattgattatactctaaaaaagcagacatccagcggttccaagtccaaagtaaagttaatcgaagagataatcgactcttcgattgtaatgcgttccaaaggtcatgctcccattttgttcgctcatgcacgtctgaatctctctgagggatcagtctccctgcagcggcagaaggccacacagcagcaatctcccacaaccgagagacgaaccaaaagtctagacactccagttatttcacttcatcgcctccctcccatgaacgcgttttcttcaaaagacgacaccgtgggcttcgaggaggaggcagagattctcgaggagaagtcgttggagcgagagaatcaagctaccgcgcaggacgaagataccgccgacagcattcactcttgcgcaggttccatacctacccaaagcagttatcaaacaaatggtagagactccttgctaagtgcagtatcaatcgacaccgaggaggccgaactgcttaaccaactgcggtacatagaaaagattgccttacagggagtcaaaatcaaggacaagaagaagtcgaagatgaagcttaggagcggtgatcatctcattctaaatataccgaaataccgattcactgactggtcaccctacagttcagctaatagctcccgaaagacctcacctggggtctccagagccagcagcattgaaagtactggtaaaggtaagctgaaaacatcggagccatataagggtaagccagtgtcgagaagccgacctgaatctcgacggaccagtgccgatgatataaaagcacgagacggacggggtagtaagaaatccagtccgaaagagcggcctcgatccatcgagatgcgtcgcctgagcaaggacaagagcaaatcccaagaagaaactgaggcagatatcgccaagcgcaaagagcgccagcagaagctatacgaatcagctatgaaacaaaccatcactatgctgagtccagtgaaggacacgttgccggctttccccgctcccggagataaaattctcgtaaagacagatggggacaaaataatcattgaaacagagtttaaatctaaagcggaggatcacgttctgattgccaagagtcccagaaaacttgataattcgcttgtgaaatttagccgcagctttgacgaagggcgcagccccgacaagttggacaaagcaaatcgcagctttgaggatcgcaataagtcctttgaagactccgagaagtcagacgctccggaagacatgctcattaaatcgccaaagaaaattgccaaggcccaggagctgaagcagaagatcgagggcagcgttgtacacaaaaagatagatggaaagtcgagtagcttggagagacccgctgaacatcattacctcggtcccgatgtcaaggctcgtagtctcgatgacaaaagacaggcgaccgaggcagcaaaaaagaatgaggagaagccggcgccagtggttaggagtgccattggggatcagcgtaggtccttggagatcctcaaacgttctctaccttcggaagatgctcgcgacagtgagggagccttcagtcgtaagccatctacagctgaaagccttgattcatatgtctccgttgatgagagccactcagccgcaagcaagtcaccagttccaggaacaggaggcggaacagaggggtacccacaccgagtgcccaccatagaatgcgaagaaccatccatcgaagaggacgaaaattcttccgaaagacgacacctaaaagttggtgggcaggatacaaataggctgagtctggatcgcagtcggagcgatgaaacgggctcatggatgacagttgaatgtgatgagttcataggatcggatacttcggataatgaaccacgtaccctggaaccagatcgtaatgttcttgaaactcaagcaaccttagaagatgccaatccgcttgaatactcgaactgcgccactcctacatcggatttaaatattcttttaacgccacccaacgcaagtccccaaattgagaagtctgtactggagacctttgagaagtacactggttcttcggacaccggcaaaaaaaaaaacaccttggataagcaaagcgaccgttccaagagctcagactcttggacaagcggagaaaaggacacaagtccacagagacaacaagactggagtctgtcagtgggcaaggagaagagttcagttgaagaggagtccagtgtcagctgctccattgcccggcctcttggaatatcacaggattttggaaaggaagaagcgcgcaagtgccaggaacttaagcagcgtatgctccagctggaagttggtaaggaagagatcacacctacaccatccaacgaacagacgccgaccaacgagcccaaaatcttggtaagcaagaaaccgagcacgcccaccttagaaaagcagagcccgatcgacttgggtactagtacagagtcctatctggaacccattgaggagcgtatagccaagatattggatcgaggaggtgcgcgcactgaggacagtgaatccagttctggtggatcccgaaaaccgccgcggattgagaagccggcgagggctaacgctggaaagaaattatcagtcactcgtgcggatgcaggaaaatcgggtagcgatcgcagttcccaggagtcaaaatcaagctttgactccaaaggttctctaagcgtagagtcgcgtggctcctttgaaacggaaagcagttctggatctctgggggccgcgcaaaggcgtggggaactggcccagaaagagcagcaaagcacctggcgcccatttcctatcgagagctcaaacagctctagtacagatgatccttggcatcatgtagaaacggacggtggctatgaacggtatgatgcacaaaatccattgcgcgactcctctgacagcgacgtaaaggaggcatcgccagatgatcagaaggacgcgagcgatgctagctatcaagacgagctaaacgactttccggctacgttcggctatccagccatgaccagtagtttaggtggaatcggtgtcaaccccactgatatcattggatacagtactgggttcaccttggggaggactctctccagaatctcggaacgtagcacagcttcggaaaagtcaagtatggaggatgatgttagcaaagcctcgacgcattccgttagcatgcgggatgaatcagtagggtcaacggatcaccagcccagtttaagctccgattcgagaagtaatacaaatcttgcttatatttcggatgctgaccgacgaacatcggcggagatgccggaaattccatgcgattctgctactggggatcgtctctccagttttggtagtcttaatgaacccaagtcgccaaccctggtcacgggacgtttctctgtgacccatgtagacgaacagcagggtgatgatgtagagcggcacacacttatgtgcctttccaatgcgggcagccaggactcggaggactggccactgccggaaattcccttcgatcacgtgccggtaaagccagctgactcgctgtacgccatgccggacttggacaaaccagtgcccaagtctttctgctggaaggcaagcttgtcgttccagcagtctcaggattctcttgactggccgtcgccgccatctagtgctatcggggctcccataatagtggaaaacatcgaaacatactatgcaagcgaagtccaaagtgctgataaggtcattttggacgaggaaatggcagtaggtcctcccgatgtagcaaaagtactaccatacgaagacaccgcctatcttatgtcggcagcctttgatgataatgactttggcaatgagcaattacaaccagatacggtaagctgtcttagctctacgctaagtgcagcctcgtgcctatcgtcctcgttaaatgtgagctgtactacctcctccacccaagctacagcgagagctctgcggaaaaactctagccccgaggtgattgtcgctcagccgacaagatcaccagctcctcgaagtcctctctcagaggatgagctcttttccagtgatgacgtcttcatgccaggcactatcaaagttcagctttctccagatgcccaattaagaaagctttccaaagggtccaacaactcggacacttccattgacgacattctctctggcagtaccacctatctagaggatcagaccacagtgcggaaaaactacgaagctcgtttgagcagcggtggaggaggagcaagctgcaagaagtgcagtcattccagccactccgaggaggaaacgagttcccttggtacggatcttgatggaacggtcagaatgggtggattacagcagaagaagtgcacccatagctctcactcggaagacacctcaattggactaagcatctcggaatggtccacgggaaccaacacagtacgccagtatgccaatctatccggatcggacagcctttccgccgtgtccacacactcgtgtgctaagagcgagaaatctaatcagactaaatcaagtataagttcgattaacaaatcagctgaaagcctaaatgagcagagtggtggaagtagcttctcgcacaagtttagcggggataatggttcatccgatggcctgcgttatgatatgctctccaattccgagaccgataagctaagtgaggccacctcagccactaggagtgatgacactaccttgactcttaccgaaatggctcacaccattagtgagtggtcaacatccagtagtcgcacacttgttggcgtggcacctggagagtatcttcctctcaagcaggcactgtcgggaaataaaactagtttaagctctcccagtgaggaaaagcgttgcgcgctcccacaagttcatcgaaggagtggtagcaatggcaatcaggcgagagctgcacaggagcacgctgacagtcaaactggtccggagacaagtgcggctgctcggaaacgtcggtcgctggagatgatgtctaaattgtatcagagccaggaaatatgctctgagtcagagtcgccgtttgtcgagcgtttgtatgcgcacagcgagaagttaaccgagcgctatcaaagccaggagtttgtgccgctccatggtggacctccagcatcccacctcgcttcgtcaaccactagtcagattcaaacccagcaaccccaacaggtccgccaaaagccaagggcgcctcaaccaccaacgaaaccaaaacctgcagtcactcgcccaatcatgcaggctttgctcaacaaaatgaagcaacctggactggcggagcaagcagccgaagctgctgaggcagaggaaaaaaaagcaatgattgctgcttctgctgtggcggcgaagcccccaccaccgccagtacccactgtaccgcccattgtgacgcccagcgatttacctggcgacgcagtggctcccccacccaagccgctggcgaagcaccacagctatgatgacagaactctgtccaagacccagatacgtgagttcaagaccactagcaagcaattgcgtcagtcaagctccttccatgagcacatgctcagcaaatcgcagcagtcgtcccaggagctgcccatgagaatcgacgaagagagggatccgcactccacgtcttcagcgaccaatacaaccaccaccaccaacactctgaacagcgagagtacagaaccgaattctccacaaatgcctcagcgggcggacaagttggtccgctgttcaccttactattccagcagcttaagctcggaatcaccgccgaatcagttgctacagaagccccctaggaaaacggccacccagctgagcgctggagctgtagcggcttccttgaaaagtccccccagtggcaacgatacggacagctcgctggacgtgcgaggtcaggaggcaaagatgagaagcagaggctatcgcaagaaacgtcagttacccgtcaaaagaatgagggctaatttaacagctgcagctctgttggagcaagcggagagttcagagtgctccgaaggctacgtaccggaagttgattcaggtagctctgagtattcgtcttgccagcgggatgaccagtaccttgagttcgacgaagaactggagagggatcaaactgacgactatgaggactatccccaatatagtggcaaatttgaaagtctggatatgagcgacaatgtggacgagatgggttttccccggtacgaccgccttagtcacatcaccaagcccatgtatcaccaggcccttgtaatggagcgtcctaatccggtgcagcttccagcccccgctaatcatccaatgccaccggccacaggacagccggtgaaaccagctcggaccaagaaacggcaattcaagcgggaggattccactgcagcaggaacttccggacattcgactgcagctccccaggttcgaccctatcatggacgcagttactgcaacccagaggagagcgagtacgaaaccagaggtggcggattgtccgatgagttggctaactctagcgaggatagctgtagtggattcgggggtgacgcgggagcatcaggatcgggtactataaggaggggtacgaccaaaggagcgggacaggatcaggagcaaggaactggaggccaggctcgacatgtgccgtatcccgattttttgtctgactacgaatccgaacccattgaatacgaacgatatgcctgcggactggacatacgtgtggatcccccacccaagtttcatgattctgatgagctaagtgaccagtaa</sequence> + <xref id="FUN_000012-T1" name="FUN_000012-T1 FUN_000012"/> + <orf end="11718" start="11206" strand="ANTISENSE"> + <protein> + <sequence md5="69752432fbe284f9672336b1173b136d">CSRVTPESTTAILARVSQLIGQSATSGFVLALLWVAVTASMIGSNLGSCSRMSGSSCCSGILPLELPFLGPSWFHRLSCGRWHWMISGGWKLHRIRTLHYKGLVIHGLGDVTKAVVPGKTHLVHIVAHIQTFKFATILGIVLIVVSLIPLQFFVELKVLVIPLARRILRAT</sequence> + <xref id="orf142" name="orf142 source=FUN_000012-T1 coords=11718..11206 length=171 frame=4 desc=FUN_000012"/> + <matches/> + </protein> + </orf> + <orf end="1110" start="595" strand="ANTISENSE"> + <protein> + <sequence md5="8b5d5a32bfde4a734177a55dd9418154">TTPRENASFAPGRILYGSASEESVIFDAFFPEVFALVATLEEELHGILVISISLRMQFDQESLALERNLAYLSPREGVDPRDVLEDCDAHVGHSQIKRHPFHILRRMHFHAIQLTPPSRLQEVKVRLRRGLTNMLFVVLHNLSLHGGVLVGHKAIRGQISMVGIILRNEVAA</sequence> + <xref id="orf321" name="orf321 source=FUN_000012-T1 coords=1110..595 length=172 frame=4 desc=FUN_000012"/> + <matches/> + </protein> + </orf> + <orf end="8925" start="8374" strand="ANTISENSE"> + <protein> + <sequence md5="c792986b585ed45b03b6c21ff3976fe4">YFCYIGRTYCHFLVQNDLISTLDFACIVCFDVFHYYGSPDSTRWRRRPVKRILRLLERQACLPAERLGHWFVQVRHGVQRVSWLYRHVIEGNFRQWPVLRVLAARIGKAHKCVPLYIITLLFVYMGHRETSRDQGWRLGFIKTTKTGETIPSSRIAWNFRHLRRCSSVSIRNISKICITSRIGA</sequence> + <xref id="orf196" name="orf196 source=FUN_000012-T1 coords=8925..8374 length=184 frame=4 desc=FUN_000012"/> + <matches/> + </protein> + </orf> + <orf end="2208" start="1567" strand="ANTISENSE"> + <protein> + <sequence md5="796ae4d6bd379b343d45415308fabd86">LGFAIYSGIYVVAFVKIEVLAIRDLVLLVCRAVKVRILVVPHVVDIGVDYVVRFSFGRVGIGVVEHAWDSCDRSCGRWALAKPEPKAEADAAAAEAAPIVSRLMVDAVKSESTSSSTNSSSSSSPTGSPSSSSVSAVPGSSASSSNSIELLRSTERTTVLVLCIVLWLVLLLGVLMLMSCIVIAWMHTSRIGTALLVVAAVTGRSPRLRSLGRK</sequence> + <xref id="orf304" name="orf304 source=FUN_000012-T1 coords=2208..1567 length=214 frame=4 desc=FUN_000012"/> + <matches> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="113" end="138"> + <location-fragments> + <mobidblite-location-fragment start="113" end="138" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + </matches> + </protein> + </orf> + <orf end="7601" start="7053" strand="ANTISENSE"> + <protein> + <sequence md5="882f08b6997fd5cf48c6f88575ad021a">DSVLVPKSIGLCFSKVGVLGFLLTKILGSLVGVCSLDGVGVISSLPTSSWSIRCLSSWHLRASSFPKSCDIPRGRAMEQLTLDSSSTELFSLPTDRLQSCCLCGLVSFSPLVQESELLERSLCLSKVFFFLPVSEEPVYFSKVSSTDFSIWGLALGGVKRIFKSDVGVAQFEYSSGLASSKVA</sequence> + <xref id="orf215" name="orf215 source=FUN_000012-T1 coords=7601..7053 length=183 frame=5 desc=FUN_000012"/> + <matches/> + </protein> + </orf> + <orf end="1856" start="1296" strand="SENSE"> + <protein> + <sequence md5="a35b46a97905a750e8fc70890d827e9b">HCGMGLSQSMQRLDDPFSDEEGSGYLGSPTRQSYRPHAFSSHSSPGGDLSDEELCSGLANLPGGSGMLGGGGGTATPLGSGYGQTEFEPLTFAPGTAVVDFAQSQQPPPTARSRSGSCASRRSQYSSSASTRPAAAPTTTLCTAPAQWFVRWISTALWSWRRRRRIRELRTRRRRRGSLWGRRRRRN</sequence> + <xref id="orf18" name="orf18 source=FUN_000012-T1 coords=1296..1856 length=187 frame=3 desc=FUN_000012"/> + <matches> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="1" end="57"> + <location-fragments> + <mobidblite-location-fragment start="1" end="57" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="98" end="138"> + <location-fragments> + <mobidblite-location-fragment start="98" end="138" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polar" start="25" end="47"> + <location-fragments> + <mobidblite-location-fragment start="25" end="47" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + </matches> + </protein> + </orf> + <orf end="2059" start="1553" strand="SENSE"> + <protein> + <sequence md5="26b17402a3132f16013f57a340e1455e">IRTAHFRPRDRSRGLRPVTAATTNSAVPIRLVCIQAITIQLISINTPSSSTNHNTMHSTSTVVRSVDLNSSMELEEEAEDPGTADTEEEEGEPVGEEEEEELVEEEVDSDLTASTINRETMGAASAAAASASALGSGLASAHRPQLRSQESHACSTTPMPTRPKLKRTT</sequence> + <xref id="orf20" name="orf20 source=FUN_000012-T1 coords=1553..2059 length=169 frame=2 desc=FUN_000012"/> + <matches> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="67" end="169"> + <location-fragments> + <mobidblite-location-fragment start="67" end="169" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polar" start="142" end="169"> + <location-fragments> + <mobidblite-location-fragment start="142" end="169" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Negative Polyelectrolyte" start="72" end="108"> + <location-fragments> + <mobidblite-location-fragment start="72" end="108" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + </matches> + </protein> + </orf> + <orf end="11931" start="1" strand="SENSE"> + <protein> + <sequence md5="01beedc2fbf8012cba37f0c0d39aa071">MSLADMGTASRSAGGEGGRHYDLATGGAGSGGHPVGGGLPGGRMTHSLSTPSGVDGTPSTPRHRGGKKLTVRIQMLDDSITMFQVQAKALGRVLFEQVCRQLNLLEADYFGLEYQEVSTHTKYWLDLEKPMNRQVGLSLIDPVLRFCIKFYTPDPAQLEEEYTRYLFCLQIKRDLATGSLQCNDNTAALMASYIVQASCGDFVPEDYPDHTYLSSYRFVPNQDATMQRKIMENHKKHVGQSPAEADLNLLETARRCELYGMKMHPAKDVEGVPLNLAVAHMGITVFQNITRINTFSWAKIRKISFKRKRFLVKLHPEGYGYYKDTVEFFFEGRNECKNFWKKCVENHGFFRCTAVQNTPRRKTRVLSRGSSFRYSGKTQKQIIEFVRENYVKRQNFQRSQSFRQGPLNASSRSQSHTYVNSSISANPLLPIDTAAWDYRNQCSDSMTPSLTKKAADTLDRRRDNPIGHMRSQVTAAQVEIYQTKNYAADSPTSQEEAECSAAGAERQHHSAVAMDKLNSNRSLSPQGPQSWTSPSHSSHHQQRGPDPARVHPGDHNTAHQHQHAQQQHQPQHYAQHQHSGSFGGSQQLYGVGGGGGGSGNCGHGGGGGGACGGGGGGGISRGGSGFGLDGIYHQSGDYGGSLSGGSIGLGFGLGLGQCPSSAASVTGVPCMLNNANANSTETETDNIIYTDINDMGHYKYPDFHSSAHQEHKISNSEHLNLNERNDIYATVNRKAKSKIREKHFSDEFIDQSILQYTRAKQMGLSQVPVLLQQPSTSAYAAALQERSYNSGSYQYHNDLNHPSESSSSSYFGTGFGTKRYGQSERTKLAQSENYLTPSLDSQSSRHTHSLPRNSELSGVDSVDSYDSHYITHHSVGILPPGHLSSSSEKLDFQLPSGNLYSTTQFVKPEDASAHYMEDEEEEEEDEGENIYDQVERDSWLKSSSCKDLFERYSSTYYDREHSKPMTAFDKEFLSSNRIDSPVTRYDDSRHSLYVAKNHSIDAHQGFSPLPQSKVYSSSYPGSTYNTQEHKRQHGHHMDYSGSQDDISQDSYELLEKYDIDFFGGRGRSEDHMRSCSLDSGNYIPSDDESVSEGHQQHKYRSEMDVKSKSAADIMNEIWDAEDPRYLPREKLSVKSDGNFYKKIQEALISAFRRRSDSENIFSFDQDRIECIQKYTKQWEGQQPKDEKSKQSPEYPLTPELVSEFEKQQARLMAHQKITRKEELIAKTHFEEYNPIMVPLNYSSHATVERTKSDPNSLANRARLGSNSRRHVLMHQKSIDLTPADSNSSDEDYIYKQIPSAPPLCKAHGNFEIPKCYDGSAASQIAQELPKTGFELPKSFFRDYERRFTKVLKEDIPYVLHKRHIMNGTAPSPSEKKHTKPKSPKSPKSPKSPKSPKSPKSPKASSGGLGPGSTDFLPDILDSLLPSDTKEFLFTQNIDLSKVDPITLEIDKTIPTIHLSSPKRDITKQMDASTLEKLNKKLSQIESDSATSSRTESMQQQKLEQKQMELIQSLRKELQANARKANKPRVIPKTKSAGKSKKGKTRITSFSSDDESLDSDDVFGSAEAIPDRLEFSPPQSRKEIESILRIEQSRLISAAWGRGQTMSSTEIEGSPPQCRRLADLESRYHTQKLDPQYANATELRRISERSISIPSSEDEPHMPMRGRIDECTNDYQRNENIPSPILEHAEFFRSNDDIYETCHEERITGSDIDYTLKKQTSSGSKSKVKLIEEIIDSSIVMRSKGHAPILFAHARLNLSEGSVSLQRQKATQQQSPTTERRTKSLDTPVISLHRLPPMNAFSSKDDTVGFEEEAEILEEKSLERENQATAQDEDTADSIHSCAGSIPTQSSYQTNGRDSLLSAVSIDTEEAELLNQLRYIEKIALQGVKIKDKKKSKMKLRSGDHLILNIPKYRFTDWSPYSSANSSRKTSPGVSRASSIESTGKGKLKTSEPYKGKPVSRSRPESRRTSADDIKARDGRGSKKSSPKERPRSIEMRRLSKDKSKSQEETEADIAKRKERQQKLYESAMKQTITMLSPVKDTLPAFPAPGDKILVKTDGDKIIIETEFKSKAEDHVLIAKSPRKLDNSLVKFSRSFDEGRSPDKLDKANRSFEDRNKSFEDSEKSDAPEDMLIKSPKKIAKAQELKQKIEGSVVHKKIDGKSSSLERPAEHHYLGPDVKARSLDDKRQATEAAKKNEEKPAPVVRSAIGDQRRSLEILKRSLPSEDARDSEGAFSRKPSTAESLDSYVSVDESHSAASKSPVPGTGGGTEGYPHRVPTIECEEPSIEEDENSSERRHLKVGGQDTNRLSLDRSRSDETGSWMTVECDEFIGSDTSDNEPRTLEPDRNVLETQATLEDANPLEYSNCATPTSDLNILLTPPNASPQIEKSVLETFEKYTGSSDTGKKKNTLDKQSDRSKSSDSWTSGEKDTSPQRQQDWSLSVGKEKSSVEEESSVSCSIARPLGISQDFGKEEARKCQELKQRMLQLEVGKEEITPTPSNEQTPTNEPKILVSKKPSTPTLEKQSPIDLGTSTESYLEPIEERIAKILDRGGARTEDSESSSGGSRKPPRIEKPARANAGKKLSVTRADAGKSGSDRSSQESKSSFDSKGSLSVESRGSFETESSSGSLGAAQRRGELAQKEQQSTWRPFPIESSNSSSTDDPWHHVETDGGYERYDAQNPLRDSSDSDVKEASPDDQKDASDASYQDELNDFPATFGYPAMTSSLGGIGVNPTDIIGYSTGFTLGRTLSRISERSTASEKSSMEDDVSKASTHSVSMRDESVGSTDHQPSLSSDSRSNTNLAYISDADRRTSAEMPEIPCDSATGDRLSSFGSLNEPKSPTLVTGRFSVTHVDEQQGDDVERHTLMCLSNAGSQDSEDWPLPEIPFDHVPVKPADSLYAMPDLDKPVPKSFCWKASLSFQQSQDSLDWPSPPSSAIGAPIIVENIETYYASEVQSADKVILDEEMAVGPPDVAKVLPYEDTAYLMSAAFDDNDFGNEQLQPDTVSCLSSTLSAASCLSSSLNVSCTTSSTQATARALRKNSSPEVIVAQPTRSPAPRSPLSEDELFSSDDVFMPGTIKVQLSPDAQLRKLSKGSNNSDTSIDDILSGSTTYLEDQTTVRKNYEARLSSGGGGASCKKCSHSSHSEEETSSLGTDLDGTVRMGGLQQKKCTHSSHSEDTSIGLSISEWSTGTNTVRQYANLSGSDSLSAVSTHSCAKSEKSNQTKSSISSINKSAESLNEQSGGSSFSHKFSGDNGSSDGLRYDMLSNSETDKLSEATSATRSDDTTLTLTEMAHTISEWSTSSSRTLVGVAPGEYLPLKQALSGNKTSLSSPSEEKRCALPQVHRRSGSNGNQARAAQEHADSQTGPETSAAARKRRSLEMMSKLYQSQEICSESESPFVERLYAHSEKLTERYQSQEFVPLHGGPPASHLASSTTSQIQTQQPQQVRQKPRAPQPPTKPKPAVTRPIMQALLNKMKQPGLAEQAAEAAEAEEKKAMIAASAVAAKPPPPPVPTVPPIVTPSDLPGDAVAPPPKPLAKHHSYDDRTLSKTQIREFKTTSKQLRQSSSFHEHMLSKSQQSSQELPMRIDEERDPHSTSSATNTTTTTNTLNSESTEPNSPQMPQRADKLVRCSPYYSSSLSSESPPNQLLQKPPRKTATQLSAGAVAASLKSPPSGNDTDSSLDVRGQEAKMRSRGYRKKRQLPVKRMRANLTAAALLEQAESSECSEGYVPEVDSGSSEYSSCQRDDQYLEFDEELERDQTDDYEDYPQYSGKFESLDMSDNVDEMGFPRYDRLSHITKPMYHQALVMERPNPVQLPAPANHPMPPATGQPVKPARTKKRQFKREDSTAAGTSGHSTAAPQVRPYHGRSYCNPEESEYETRGGGLSDELANSSEDSCSGFGGDAGASGSGTIRRGTTKGAGQDQEQGTGGQARHVPYPDFLSDYESEPIEYERYACGLDIRVDPPPKFHDSDELSDQ</sequence> + <xref id="orf133" name="orf133 source=FUN_000012-T1 coords=1..11931 length=3977 frame=1 desc=FUN_000012"/> + <matches> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polyampholyte" start="1090" end="1105"> + <location-fragments> + <mobidblite-location-fragment start="1090" end="1105" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Positive Polyelectrolyte" start="1527" end="1541"> + <location-fragments> + <mobidblite-location-fragment start="1527" end="1541" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="912" end="931"> + <location-fragments> + <mobidblite-location-fragment start="912" end="931" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polar" start="559" end="581"> + <location-fragments> + <mobidblite-location-fragment start="559" end="581" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="1920" end="2025"> + <location-fragments> + <mobidblite-location-fragment start="1920" end="2025" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="3426" end="3463"> + <location-fragments> + <mobidblite-location-fragment start="3426" end="3463" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polar" start="3552" end="3583"> + <location-fragments> + <mobidblite-location-fragment start="3552" end="3583" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polar" start="3910" end="3929"> + <location-fragments> + <mobidblite-location-fragment start="3910" end="3929" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polar" start="3429" end="3449"> + <location-fragments> + <mobidblite-location-fragment start="3429" end="3449" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polyampholyte" start="2398" end="2422"> + <location-fragments> + <mobidblite-location-fragment start="2398" end="2422" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="836" end="859"> + <location-fragments> + <mobidblite-location-fragment start="836" end="859" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="3812" end="3938"> + <location-fragments> + <mobidblite-location-fragment start="3812" end="3938" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polar" start="1920" end="1945"> + <location-fragments> + <mobidblite-location-fragment start="1920" end="1945" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polar" start="2590" end="2630"> + <location-fragments> + <mobidblite-location-fragment start="2590" end="2630" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="1362" end="1410"> + <location-fragments> + <mobidblite-location-fragment start="1362" end="1410" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polar" start="2492" end="2531"> + <location-fragments> + <mobidblite-location-fragment start="2492" end="2531" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polar" start="3596" end="3621"> + <location-fragments> + <mobidblite-location-fragment start="3596" end="3621" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polyampholyte" start="2757" end="2773"> + <location-fragments> + <mobidblite-location-fragment start="2757" end="2773" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="3213" end="3252"> + <location-fragments> + <mobidblite-location-fragment start="3213" end="3252" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="3133" end="3158"> + <location-fragments> + <mobidblite-location-fragment start="3133" end="3158" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="3040" end="3060"> + <location-fragments> + <mobidblite-location-fragment start="3040" end="3060" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polyampholyte" start="1947" end="2024"> + <location-fragments> + <mobidblite-location-fragment start="1947" end="2024" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polar" start="2774" end="2799"> + <location-fragments> + <mobidblite-location-fragment start="2774" end="2799" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polar" start="3345" end="3371"> + <location-fragments> + <mobidblite-location-fragment start="3345" end="3371" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="486" end="508"> + <location-fragments> + <mobidblite-location-fragment start="486" end="508" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="447" end="467"> + <location-fragments> + <mobidblite-location-fragment start="447" end="467" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="3718" end="3778"> + <location-fragments> + <mobidblite-location-fragment start="3718" end="3778" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="2488" end="2710"> + <location-fragments> + <mobidblite-location-fragment start="2488" end="2710" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="49" end="68"> + <location-fragments> + <mobidblite-location-fragment start="49" end="68" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polyampholyte" start="2211" end="2234"> + <location-fragments> + <mobidblite-location-fragment start="2211" end="2234" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="520" end="581"> + <location-fragments> + <mobidblite-location-fragment start="520" end="581" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="2095" end="2134"> + <location-fragments> + <mobidblite-location-fragment start="2095" end="2134" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polyampholyte" start="542" end="558"> + <location-fragments> + <mobidblite-location-fragment start="542" end="558" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polar" start="2637" end="2661"> + <location-fragments> + <mobidblite-location-fragment start="2637" end="2661" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Proline-rich" start="3816" end="3830"> + <location-fragments> + <mobidblite-location-fragment start="3816" end="3830" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polar" start="1762" end="1784"> + <location-fragments> + <mobidblite-location-fragment start="1762" end="1784" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polyampholyte" start="3537" end="3551"> + <location-fragments> + <mobidblite-location-fragment start="3537" end="3551" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="2753" end="2799"> + <location-fragments> + <mobidblite-location-fragment start="2753" end="2799" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="3502" end="3704"> + <location-fragments> + <mobidblite-location-fragment start="3502" end="3704" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polyampholyte" start="2538" end="2562"> + <location-fragments> + <mobidblite-location-fragment start="2538" end="2562" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polar" start="520" end="541"> + <location-fragments> + <mobidblite-location-fragment start="520" end="541" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="1520" end="1558"> + <location-fragments> + <mobidblite-location-fragment start="1520" end="1558" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polar" start="3633" end="3682"> + <location-fragments> + <mobidblite-location-fragment start="3633" end="3682" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="3324" end="3375"> + <location-fragments> + <mobidblite-location-fragment start="3324" end="3375" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Negative Polyelectrolyte" start="915" end="931"> + <location-fragments> + <mobidblite-location-fragment start="915" end="931" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="1762" end="1787"> + <location-fragments> + <mobidblite-location-fragment start="1762" end="1787" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="1483" end="1502"> + <location-fragments> + <mobidblite-location-fragment start="1483" end="1502" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Proline-rich" start="3504" end="3532"> + <location-fragments> + <mobidblite-location-fragment start="3504" end="3532" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polar" start="2423" end="2442"> + <location-fragments> + <mobidblite-location-fragment start="2423" end="2442" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="1086" end="1105"> + <location-fragments> + <mobidblite-location-fragment start="1086" end="1105" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polar" start="2235" end="2261"> + <location-fragments> + <mobidblite-location-fragment start="2235" end="2261" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polyampholyte" start="2679" end="2705"> + <location-fragments> + <mobidblite-location-fragment start="2679" end="2705" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="2152" end="2318"> + <location-fragments> + <mobidblite-location-fragment start="2152" end="2318" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="Polyampholyte" start="2152" end="2200"> + <location-fragments> + <mobidblite-location-fragment start="2152" end="2200" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + <mobidblite-match> + <signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction"> + <signature-library-release library="MOBIDB_LITE" version="2.0"/> + </signature> + <model-ac>mobidb-lite</model-ac> + <locations> + <mobidblite-location sequence-feature="" start="2396" end="2471"> + <location-fragments> + <mobidblite-location-fragment start="2396" end="2471" dc-status="CONTINUOUS"/> + </location-fragments> + </mobidblite-location> + </locations> + </mobidblite-match> + </matches> + </protein> + </orf> + </nucleotide-sequence> +</nucleotide-sequence-matches>
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/transcripts.fa Mon Nov 15 17:53:24 2021 +0000 @@ -0,0 +1,169 @@ +>FUN_000012-T1 FUN_000012 +ATGTCCCTGGCCGACATGGGCACAGCCTCTCGATCCGCCGGCGGAGAAGGTGGTAGACACTATGATCTAGCCACGGGCGG +AGCTGGAAGTGGGGGTCATCCAGTGGGCGGCGGTCTGCCCGGAGGCCGCATGACGCACTCCCTCAGCACTCCTTCCGGGG +TGGATGGCACGCCCTCCACACCCCGACATCGCGGCGGCAAAAAGCTGACTGTTCGCATCCAGATGCTGGACGACTCGATC +ACCATGTTCCAAGTACAGGCTAAAGCACTGGGCCGCGTGCTGTTTGAACAGGTATGCCGTCAGCTGAATTTACTGGAGGC +CGACTACTTCGGCTTGGAGTACCAGGAAGTCTCCACACATACCAAATACTGGCTGGATCTGGAGAAGCCAATGAACCGCC +AGGTGGGCCTCTCTCTTATCGATCCAGTGCTGCGCTTCTGCATCAAGTTCTATACACCCGATCCAGCGCAATTGGAAGAG +GAGTACACCAGGTATTTGTTCTGCTTGCAAATCAAACGAGACCTGGCCACAGGCAGTCTGCAGTGCAACGATAACACGGC +GGCCTTAATGGCAAGCTACATTGTACAGGCGTCATGCGGCGACTTCGTTCCGGAGGATTATCCCGACCATACTTATCTGT +CCTCGTATCGCTTTGTGCCCAACCAGGACGCCACCATGCAGCGAAAGATTATGGAGAACCACAAAAAGCATGTTGGTCAA +TCCCCGGCGGAGGCGGACCTTAACCTCTTGGAGACGGCTCGGAGGTGTGAGCTGTATGGCATGAAAATGCATCCGGCGAA +GGATGTGGAAGGGGTGCCGCTTAATCTGGCTGTGGCCCACATGGGCATCACAGTCTTCCAGAACATCACGCGGATCAACA +CCTTCTCGTGGGCTAAGATACGCAAGATTTCTTTCAAGCGCAAGCGATTCCTGGTCAAACTGCATCCGGAGGGATATGGA +TATTACAAGGATACCGTGGAGTTCTTCTTCGAGGGTCGCAACGAGTGCAAAAACTTCTGGAAAAAATGCGTCGAAAATCA +CGGATTCTTCCGATGCACTGCCGTACAAAATACGCCCAGGCGCAAAACTCGCGTTCTCTCGCGGGGTAGTTCATTCCGCT +ATAGCGGAAAAACCCAGAAGCAGATTATCGAGTTCGTTCGCGAAAATTATGTGAAGCGCCAAAACTTCCAAAGGTCTCAG +TCATTCCGGCAAGGGCCACTGAATGCTAGTAGCCGAAGTCAATCGCATACGTATGTGAATTCCAGCATTTCAGCCAATCC +CCTTCTCCCAATTGACACTGCGGCATGGGACTATCGCAATCAATGCAGCGACTCGATGACCCCTTCTCTGACGAAGAAGG +CAGCGGATACCTTGGATCGCCGACGCGACAATCCTATCGGCCACATGCGTTCTCAAGTCACAGCAGCCCAGGTGGAGATC +TATCAGACGAAGAACTATGCAGCGGACTCGCCAACCTCCCAGGAGGAAGCGGAATGCTCGGCGGCGGGGGCGGAACGGCA +ACACCACTCGGCAGTGGCTATGGACAAACTGAATTCGAACCGCTCACTTTCGCCCCAGGGACCGCAGTCGTGGACTTCGC +CCAGTCACAGCagccaccaccaacAGCGCGGTCCCGATCCGGCTCGTGTGCATCCAGGCGATCACAATACAGctcatcag +catcaacacgcccagcagcagcaccaaccacaacaCTATGCACAGCACCAGCACAGTGGTTCGTTCGGTGGATCTCAACA +GCTCTATGGAGTTggaggaggaggcggaggATCCGGGAACTGCGGACACGgaggaggaggagggggagcCTGTGGGggag +gaggaggaggaggaattagtcgaggaggaagtggaTTCGGACTTGACGGCATCTACCATCAATCGGGAGACTATGGGGGC +AGCCTCAgcggcggcagcatcggcctcggctttgggctcgggcttggcCAGTGCCCATCGTCCGCAGCTTCGGTCACAGG +AGTCCCATGCATGCTCAACAACGCCaatgccaactcgaccgaaactgaaacggACAACATAATCTACACCGATATCAACG +ACATGGGGCACTACAAGTATCCGGACTTTCACAGCTCTGCACACCAGGAGCACAAGATCTCGAATAGCGAGCACCTCAAT +CTTAACGAACGCAACGACATATATGCCACTGTAAATCGCAAAGCCAAGTCAAAGATTCGAGAGAAGCATTTTAGCGATGA +GTTCATCGATCAGTCTATACTCCAGTACACGAGGGCCAAGCAAATGGGACTGAGTCAAGTTCCTGTTCTCCTGCAACAAC +CAAGCACCTCTGCCTATGCGGCTGCCCTTCAAGAAAGAAGTTACAACAGCGGAAGTTACCAGTATCATAACGATCTGAAT +CACCCCTCAGAGTCCTCatcctcctcctacTTTGGGACTGGATTCGGCACTAAGCGGTATGGTCAGAGCGAGCGAACCAA +GCTTGCCCAATCTGAAAATTACCTGACGCCTTCTCTGGACTCGCAAAGTTCCCGGCACACTCACTCACTTCCCCGGAACT +CGGAGTTGTCTGGAGTTGATTCAGTAGATTCGTACGACAGCCACTACATCACCCATCATTCAGTAGGAATTCTTCCCCCC +GGTCATCTGTCTTCTTCGTCAGAGAAACTTGATTTCCAGTTACCCTCTGGTAATCTCTATTCAACGACTCAATTTGTCAA +GCCTGAAGATGCTTCTGCCCACTACATGGAAGATgaagaggaagaagaggaagatgaaggCGAGAATATTTACGACCAGG +TGGAGCGTGATTCGTGGCTGAAGAGTAGCTCTTGCAAAGATCTCTTCGAGCGCTACAGTAGCACATACTACGATCGAGAG +CATTCTAAGCCAATGACTGCATTTGACAAAGAGTTTCTTTCCTCCAATCGTATTGACTCGCCAGTGACGCGATACGACGA +TTCCCGTCACTCATTGTATGTGGCCAAAAACCACTCGATCGATGCGCACCAAGGCTTCTCTCCATTGCCGCAGAGCAAGG +TGTACTCATCCAGTTATCCTGGCAGTACTTACAATACCCAGGAGCACAAGCGCCAGCATGGTCACCATATGGACTATTCA +GGTTCGCAAGACGACATCTCGCAGGACAGTTACGAACTTCTGGAGAAGTACGATATTGACTTCTTTGGAGGACGTGGCCG +CTCCGAGGACCACATGCGCTCTTGTTCGCTTGATTCGGGCAACTACATTCCGAGCGACGACGAGTCGGTATCCGAGGGCC +ATCAGCAGCACAAGTACCGCTCGGAAATGGACGTCAAGTCAAAGTCAGCAGCGGATATTATGAATGAAATTTGGGATGCT +GAGGATCCACGCTATCTGCCGCGCGAGAAGCTGTCTGTCAAGTCAGATGGGAACTTCTACAAGAAGATTCAGGAGGCTCT +GATCTCTGCTTTCCGTCGGCGATCTGATAGTGAGAATATCTTCAGCTTCGACCAGGATCGCATTGAGTGCATCCAAAAGT +ACACCAAACAGTGGGAGGGTCAGCAGCCCAAGGACGAAAAGAGCAAGCAGAGTCCGGAGTATCCACTCACTCCCGAACTT +GTGTCGGAGTTTGAGAAGCAGCAGGCGCGCCTAATGGCCCACCAAAAGATAACACGTAAGGAGGAGCTAATTGCCAAAAC +GCACTTTGAGGAATATAACCCCATTATGGTGCCACTTAATTACTCTTCTCATGCTACGGTGGAGCGCACCAAAAGCGATC +CGAACTCGCTGGCCAACCGTGCTCGTTTAGGAAGTAATTCTCGCCGGCATGTGCTTATGCATCAGAAGTCTATTGACTTA +ACCCCCGCAGACTCGAACTCCAGCGATGAGGATTACATCTACAAACAGATACCGAGTGCTCCACCTCTTTGCAAAGCACA +CGGCAATTTTGAAATTCCCAAGTGCTACGATGGAAGTGCTGCATCGCAAATCGCTCAGGAACTGCCAAAGACAGGCTTTG +AGCTTCCGAAGAGCTTTTTCAGAGATTACGAAAGGCGTTTCACAAAAGTGTTAAAGGAGGATATTCCCTATGTGCTCCAC +AAGCGCCACATCATGAACGGAACAGCTCCTTCGCCAAGCGAAAAGAAACACACTAAGCCCAAGTCTccaaaatcgccaaa +atcccccaagtcacctaaatctccgaaatcccctaaatcgccaaaGGCTAGTTCCGGTGGTCTGGGACCTGGCTCTACAG +ATTTTCTGCCTGATATTCTCGACAGTCTCTTGCCTTCAGACACCAAAGAATTTCTTTTCACCCAAAACATTGACCTTTCG +AAGGTGGACCCAATCACTTTGGAGATCGACAAGACCATACCGACAATTCATTTGTCTTCACCGAAACGGGACATCACAAA +GCAGATGGATGCCTCAACGCTGGAGAAACTGAATAAAAAGCTCAGTCAGATCGAAAGCGATTCAGCAACCAGTTCGCGAA +CCGAGAGCATGCAGCAGCAAAAGCTggagcaaaaacagatggagcTCATTCAAAGTCTTCGCAAGGAGCTCCAGGCCAAC +GCTCGAAAAGCTAATAAGCCAAGGGTTATTCCTAAGACCAAGTCGGCTGGGAAATCAAAGAAAGGCAAAACTCGAATCAC +CTCCTTCTCCTCCGATGACGAAAGCTTGGACTCGGATGATGTATTTGGTTCAGCGGAGGCCATTCCCGACCGCTTGGAGT +TCTCGCCACCGCAGTCCCGCAAGGAGATCGAGTCCATTCTACGCATCGAGCAAAGCAGGCTTATATCGGCGGCGTGGGGT +CGTGGACAAACAATGAGCTCCACAGAGATTGAGGGATCTCCCCCTCAGTGTAGGCGCCTTGCTGATCTGGAGAGTCGGTA +CCACACCCAAAAACTAGACCCTCAGTATGCCAATGCTACTGAATTACGACGAATCTCAGAGCGCTCTATTTCAATACCTT +CGTCGGAGGACGAACCCCATATGCCCATGCGAGGACGTATTGACGAGTGCACGAATGACTATCAGAGGAACGAAAACATT +CCTTCACCTATATTAGAGCATGCGGAATTTTTCCGTAGTAACGACGATATATATGAAACTTGCCACGAAGAGCGAATTAC +GGGCTCCGACATTGATTATACTCTAAAAAAGCAGACATCCAGCGGTTCCAAGTCCAAAGTAAAGTTAATCGAAGAGATAA +TCGACTCTTCGATTGTAATGCGTTCCAAAGGTCATGCTCCCATTTTGTTCGCTCATGCACGTCTGAATCTCTCTGAGGGA +TCAGTCTCCCTGCAGCGGCAGAAGGCCACACAGCAGCAATCTCCCACAACCGAGAGACGAACCAAAAGTCTAGACACTCC +AGTTATTTCACTTCATCGCCTCCCTCCCATGAACGCGTTTTCTTCAAAAGACGACACCGTGGGCTTCGAGGAGGAGGCAG +AGATTCTCGAGGAGAAGTCGTTGGAGCGAGAGAATCAAGCTACCGCGCAGGACGAAGATACCGCCGACAGCATTCACTCT +TGCGCAGGTTCCATACCTACCCAAAGCAGTTATCAAACAAATGGTAGAGACTCCTTGCTAAGTGCAGTATCAATCGACAC +CGAGGAGGCCGAACTGCTTAACCAACTGCGGTACATAGAAAAGATTGCCTTACAGGGAGTCAAAAtcaaggacaagaaga +agtcgaagatgaagctTAGGAGCGGTGATCATCTCATTCTAAATATACCGAAATACCGATTCACTGACTGGTCACCCTAC +AGTTCAGCTAATAGCTCCCGAAAGACCTCACCTGGGGTCTCCAGAGCCAGCAGCATTGAAAGTACTGGTAAAGGTAAGCT +GAAAACATCGGAGCCATATAAGGGTAAGCCAGTGTCGAGAAGCCGACCTGAATCTCGACGGACCAGTGCCGATGATATAA +AAGCACGAGACGGACGGGGTAGTAAGAAATCCAGTCCGAAAGAGCGGCCTCGATCCATCGAGATGCGTCGCCTGAGCAAG +GACAAGAGCAAATCCCAAGAAGAAACTGAGGCAGATATCGCCAAGCGCAAAGAGCGCCAGCAGAAGCTATACGAATCAGC +TATGAAACAAACCATCACTATGCTGAGTCCAGTGAAGGACACGTTGCCGGCTTTCCCCGCTCCCGGAGATAAAATTCTCG +TAAAGACAGATGGGGACAAAATAATCATTGAAACAGAGTTTAAATCTAAAGCGGAGGATCACGTTCTGATTGCCAAGAGT +CCCAGAAAACTTGATAATTCGCTTGTGAAATTTAGCCGCAGCTTTGACGAAGGGCGCAGCCCCGACAAGTTGGACAAAGC +AAATCGCAGCTTTGAGGATCGCAATAAGTCCTTTGAAGACTCCGAGAAGTCAGACGCTCCGGAAGACATGCTCATTAAAT +CGCCAAAGAAAATTGCCAAGGCCCAGGAGCTGAAGCAGAAGATCGAGGGCAGCGTTGTACACAAAAAGATAGATGGAAAG +TCGAGTAGCTTGGAGAGACCCGCTGAACATCATTACCTCGGTCCCGATGTCAAGGCTCGTAGTCTCGATGACAAAAGACA +GGCGACCGAGGCAGCAAAAAAGAATGAGGAGAAGCCGGCGCCAGTGGTTAGGAGTGCCATTGGGGATCAGCGTAGGTCCT +TGGAGATCCTCAAACGTTCTCTACCTTCGGAAGATGCTCGCGACAGTGAGGGAGCCTTCAGTCGTAAGCCATCTACAGCT +GAAAGCCTTGATTCATATGTCTCCGTTGATGAGAGCCACTCAGCCGCAAGCAAGTCACCAGTTCCAGGAACAGGAGGCGG +AACAGAGGGGTACCCACACCGAGTGCCCACCATAGAATGCGAAGAACCATCCATCGAAGAGGACGAAAATTCTTCCGAAA +GACGACACCTAAAAGTTGGTGGGCAGGATACAAATAGGCTGAGTCTGGATCGCAGTCGGAGCGATGAAACGGGCTCATGG +ATGACAGTTGAATGTGATGAGTTCATAGGATCGGATACTTCGGATAATGAACCACGTACCCTGGAACCAGATCGTAATGT +TCTTGAAACTCAAGCAACCTTAGAAGATGCCAATCCGCTTGAATACTCGAACTGCGCCACTCCTACATCGGATTTAAATA +TTCTTTTAACGCCACCCAACGCAAGTCCCCAAATTGAGAAGTCTGTACTGGAGACCTTTGAGAAGTACACTGGTTCTTCG +GACACCGGCAAaaaaaaaaaCACCTTGGATAAGCAAAGCGACCGTTCCAAGAGCTCAGACTCTTGGACAAGCGGAGAAAA +GGACACAAGTCCACAGAGACAACAAGACTGGAGTCTGTCAGTGGGCAAGGAGAAGAGTTCAGTTGAAGAGGAGTCCAGTG +TCAGCTGCTCCATTGCCCGGCCTCTTGGAATATCACAGGATTTTGGAAAGGAAGAAGCGCGCAAGTGCCAGGAACTTAAG +CAGCGTATGCTCCAGCTGGAAGTTGGTAAGGAAGAGATCACACCTACACCATCCAACGAACAGACGCCGACCAACGAGCC +CAAAATCTTGGTAAGCAAGAAACCGAGCACGCCCACCTTAGAAAAGCAGAGCCCGATCGACTTGGGTACTAGTACAGAGT +CCTATCTGGAACCCATTGAGGAGCGTATAGCCAAGATATTGGATCGAGGAGGTGCGCGCACTGAGGACAGTGAATCCAGT +TCTGGTGGATCCCGAAAACCGCCGCGGATTGAGAAGCCGGCGAGGGCTAACGCTGGAAAGAAATTATCAGTCACTCGTGC +GGATGCAGGAAAATCGGGTAGCGATCGCAGTTCCCAGGAGTCAAAATCAAGCTTTGACTCCAAAGGTTCTCTAAGCGTAG +AGTCGCGTGGCTCCTTTGAAACGGAAAGCAGTTCTGGATCTCTGGGGGCCGCGCAAAGGCGTGGGGAACTGGCCCAGAAA +GAGCAGCAAAGCACCTGGCGCCCATTTCCTATCGAGAGCTCAAACAGCTCTAGTACAGATGATCCTTGGCATCATGTAGA +AACGGACGGTGGCTATGAACGGTATGATGCACAAAATCCATTGCGCGACTCCTCTGACAGCGACGTAAAGGAGGCATCGC +CAGATGATCAGAAGGACGCGAGCGATGCTAGCTATCAAGACGAGCTAAACGACTTTCCGGCTACGTTCGGCTATCCAGCC +ATGACCAGTAGTTTAGGTGGAATCGGTGTCAACCCCACTGATATCATTGGATACAGTACTGGGTTCACCTTGGGGAGGAC +TCTCTCCAGAATCTCGGAACGTAGCACAGCTTCGGAAAAGTCAAGTATGGAGGATGATGTTAGCAAAGCCTCGACGCATT +CCGTTAGCATGCGGGATGAATCAGTAGGGTCAACGGATCACCAGCCCAGTTTAAGCTCCGATTCGAGAAGTAATACAAAT +CTTGCTTATATTTCGGATGCTGACCGACGAACATCGGCGGAGATGCCGGAAATTCCATGCGATTCTGCTACTGGGGATCG +TCTCTCCAGTTTTGGTAGTCTTAATGAACCCAAGTCGCCAACCCTGGTCACGGGACGTTTCTCTGTGACCCATGTAGACG +AACAGCAGGGTGATGATGTAGAGCGGCACACACTTATGTGCCTTTCCAATGCGGGCAGCCAGGACTCGGAGGACTGGCCA +CTGCCGGAAATTCCCTTCGATCACGTGCCGGTAAAGCCAGCTGACTCGCTGTACGCCATGCCGGACTTGGACAAACCAGT +GCCCAAGTCTTTCTGCTGGAAGGCAAGCTTGTCGTTCCAGCAGTCTCAGGATTCTCTTGACTGGCCGTCGCCGCCATCTA +GTGCTATCGGGGCTCCCATAATAGTGGAAAACATCGAAACATACTATGCAAGCGAAGTCCAAAGTGCTGATAAGGTCATT +TTGGACGAGGAAATGGCAGTAGGTCCTCCCGATGTAGCAAAAGTACTACCATACGAAGACACCGCCTATCTTATGTCGGC +AGCCTTTGATGATAATGACTTTGGCAATGAGCAATTACAACCAGATACGGTAAGCTGTCTTAGCTCTACGCTAAGTGCAG +CCTCGTGCCTATCGTCCTCGTTAAATGTGAGCTGTACTACCTCCTCCACCCAAGCTACAGCGAGAGCTCTGCGGAAAAAC +TCTAGCCCCGAGGTGATTGTCGCTCAGCCGACAAGATCACCAGCTCCTCGAAGTCCTCTCTCAGAGGATGAGCTCTTTTC +CAGTGATGACGTCTTCATGCCAGGCACTATCAAAGTTCAGCTTTCTCCAGATGCCCAATTAAGAAAGCTTTCCAAAGGGT +CCAACAACTCGGACACTTCCATTGACGACATTCTCTCTGGCAGTACCACCTATCTAGAGGATCAGACCACAGTGCGGAAA +AACTACGAAGCTCGTTTGAGCAgcggtggaggaggagCAAGCTGCAAGAAGTGCAGTCATTCCAGCCACTCCGAGGAGGA +AACGAGTTCCCTTGGTACGGATCTTGATGGAACGGTCAGAATGGGTGGATTACAGCAGAAGAAGTGCACCCATAGCTCTC +ACTCGGAAGACACCTCAATTGGACTAAGCATCTCGGAATGGTCCACGGGAACCAACACAGTACGCCAGTATGCCAATCTA +TCCGGATCGGACAGCCTTTCCGCCGTGTCCACACACTCGTGTGCTAAGAGCGAGAAATCTAATCAGACTAAATCAAGTAT +AAGTTCGATTAACAAATCAGCTGAAAGCCTAAATGAGCAGAGTGGTGGAAGTAGCTTCTCGCACAAGTTTAGCGGGGATA +ATGGTTCATCCGATGGCCTGCGTTATGATATGCTCTCCAATTCCGAGACCGATAAGCTAAGTGAGGCCACCTCAGCCACT +AGGAGTGATGACACTACCTTGACTCTTACCGAAATGGCTCACACCATTAGTGAGTGGTCAACATCCAGTAGTCGCACACT +TGTTGGCGTGGCACCTGGAGAGTATCTTCCTCTCAAGCAGGCACTGTCGGGAAATAAAACTAGTTTAAGCTCTCCCAGTG +AGGAAAAGCGTTGCGCGCTCCCACAAGTTCATCGAAGGAGTGGTAGCAATGGCAATCAGGCGAGAGCTGCACAGGAGCAC +GCTGACAGTCAAACTGGTCCGGAGACAAGTGCGGCTGCTCGGAAACGTCGGTCGCTGGAGATGATGTCTAAATTGTATCA +GAGCCAGGAAATATGCTCTGAGTCAGAGTCGCCGTTTGTCGAGCGTTTGTATGCGCACAGCGAGAAGTTAACCGAGCGCT +ATCAAAGCCAGGAGTTTGTGCCGCTCCATGGTGGACCTCCAGCATCCCACCTCGCTTCGTCAACCACTAGTCAGATTCAA +ACCCAGCAACCCCAACAGGTCCGCCAAAAGCCAAGGGCGCCTCAACCACCAACGAAACCAAAACCTGCAGTCACTCGCCC +AATCATGCAGGCTTTGCTCAACAAAATGAAGCAACCTGGACTGGCGGAGCAAGCAGCCGAAGCTGCTGAGGCAGAGGAAA +aaaaaGCAATGATTgctgcttctgctgtggcggcgaagcccccaccaccgccAGTACCCACTGTACCGCccattgtgacg +cccAGCGATTTACCTGGCGACGCAGTGGCTCCCCCACCCAAGCCGCTGGCGAAGCACCACAGCTATGATGACAGAACTCT +GTCCAAGACCCAGATACGTGAGTTCAAGACCACTAGCAAGCAATTGCGTCAGTCAAGCTCCTTCCATGAGCACATGCTCA +GCAAATCGCAGCAGTCGTCCCAGGAGCTGCCCATGAGAATCGACGAAGAGAGGGATCCGCACTCCACGTCTTCAGCGACC +AATACAaccaccaccaccaacaCTCTGAACAGCGAGAGTACAGAACCGAATTCTCCACAAATGCCTCAGCGGGCGGACAA +GTTGGTCCGCTGTTCACCTTACTATTCCAGCAGCTTAAGCTCGGAATCACCGCCGAATCAGTTGCTACAGAAGCCCCCTA +GGAAAACGGCCACCCAGCTGAGCGCTGGAGCTGTAGCGGCTTCCTTGAAAAGTCCCCCCAGTGGCAACGATACGGACAGC +TCGCTGGACGTGCGAGGTCAGGAGGCAAAGATGAGAAGCAGAGGCTATCGCAAGAAACGTCAGTTACCCGTCAAAAGAAT +GAGGGCTAATTTAACAGCTGCAGCTCTGTTGGAGCAAGCGGAGAGTTCAGAGTGCTCCGAAGGCTACGTACCGGAAGTTG +ATTCAGGTAGCTCTGAGTATTCGTCTTGCCAGCGGGATGACCAGTACCTTGAGTTCGACGAAGAACTGGAGAGGGATCAA +ACTGACGACTATGAGGACTATCCCCAATATAGTGGCAAATTTGAAAGTCTGGATATGAGCGACAATGTGGACGAGATGGG +TTTTCCCCGGTACGACCGCCTTAGTCACATCACCAAGCCCATGTatcaccaggcccttgtaATGGAGCGTCCTAATCCGG +TGCAGCTTCCAGCCCCCGCTAATCATCCAATGCCACCGGCCACAGGACAGCCGGTGAAACCAGCTCGGACCAAGAAACGG +CAATTCAAGCGGGAGGATTCCACTGCAGCAGGAACTTCCGGACATTCGACTGCAGCTCCCCAGGTTCGACCCTATCATGG +ACGCAGTTACTGCAACCCAGAGGAGAGCGAGTACGAAACCAGAGGTGGCGGATTGTCCGATGAGTTGGCTAACTCTAGCG +AGGATAGCTGTAGTGGATTCGGGGGTGACGCGGGAGCATCAGGATCGGGTACTATAAGGAGGGGTACGACCAAAGGAGCG +GGACAGGATCAGGAGCAAGGAACTGGAGGCCAGGCTCGACATGTGCCGTATCCCGATTTTTTGTCTGACTACGAATCCGA +ACCCATTGAATACGAACGATATGCCTGCGGACTGGACATACGTGTGGATCCCCCACCCAAGTTTCATGATTCTGATGAGC +TAAGTGACCAGTAA +>FUN_000018-T1 FUN_000018 +ATGCCACCCACGATCAACAATTCGGCGGTAAACAGTGCCGCCGAAAAGCGACCCCAGCGGCAAACGGAGCGCAAATCCGA +GATCATTTGCCGCGTGAAGTATGGAAACAACCTGCCGGATATACCATTTGATCTGAAGTTTCTGCAGTACCCCTTCGACA +GCCACCGCTTCGTGCAGTACAACCCAACGTCGCTAGAGCGTAACTTCAAGTATGACGTGCTGACGGAACACGATTTGGGT +GTCACGGTGGACCTGATTAACCGGGAGCTCTATCAGGCCGACTCCATGACGCTGCTGGACCCCGCCGATGAAAAACTGCT +GGAGGAGGAGACTCTGACGCCCACAGACTCTGTGCGTTCGCGCCAGCATTCGAGGACGGTGTCATGGTTGCGCAAATCCG +AGTACATCTCCACCGAGCAGACGCGCTTCCAGCCCCAGAACCTGGAGAACATCGAGGCCAAGGTCGGTTACAACGTCAAG +AAGTCGCTTCGGGAGGAGACTCTCTACCTGGACCGCGAAGCCCAGATCAAAGCCATCGAGAAGACCTTCAGCGACACCAA +GAGCGAAATTACCAAGCACTATTCCAAGCCCAATGTGGTGCCAGTGGAGGTACTGCCTATCTTCCCCGACTTCACCAACT +GGAAGTTCCCGTGCGCCCAGGTCATATTTGACAGTGATCCCGCTCCTGCGGGCAAGAACGTGCCCGCCCAGCTGGAGGAG +ATGTCGCAGGCCATGATTCGTGGTGTGATGGACGAGAGCGGCGAACAGTTTGTCGCCTACTTCCTGCCCACAGAGCAGAC +GCTGGAGAAACGCCGTACAGACTTCATCAATGGCGAGCTGTACAAGGAGGaggaggagtacgagtacaagATCGCTCGAG +AGTACAACTGGAACGTGAAGACCAAAGCTTCCAAGGGCTACGAAGAAAACTACTTCTTCGTGATGCGTCAGGACGGCATC +TACTACAACGAGCTAGAAACCCGTGTGCGCCTTAACAAGCGTCGCGTTAAGGTTGGCCAGCAACCCAACAACACCAAGCT +GGTTGTCAAGCATCGTCCATTGGACAGCATGGAGCATCGTATGCAGCGCTATCGCGAGCGCCAGCTAGAAGTTCCTGGCG +AGGaggaggaGATCGTGGAAGAAGTGAGGGAAGAGGAGCAAATGCAAATCATTGGCGAGACGGAGAAGACGAGCGAGGAC +GCAGCTGTTGGCGCACAGGCAGCATCTGGAGCGGACTCACCCGCCCAGGTAGCCCGCGATCGACAGTCTCGTTCTCGGAG +TCGAACTCGCAGCGG
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/interproscan.loc.sample Mon Nov 15 17:53:24 2021 +0000 @@ -0,0 +1,8 @@ +# this is a tab separated file describing the location of interproscan databases used for the +# interproscan annotation tool +# +# the columns are: +# value description interproscan_version path +# +# for example +# 5.52-86.0 InterProScan 5.52-86.0 5.52-86.0 /tmp/database/interproscan/5.52-86.0/
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_data_table_conf.xml.sample Mon Nov 15 17:53:24 2021 +0000 @@ -0,0 +1,6 @@ +<tables> + <table name="interproscan" comment_char="#" allow_duplicate_entries="False"> + <columns>value, description, interproscan_version, path</columns> + <file path="tool-data/interproscan.loc" /> + </table> +</tables>
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_data_table_conf.xml.test Mon Nov 15 17:53:24 2021 +0000 @@ -0,0 +1,6 @@ +<tables> + <table name="interproscan" comment_char="#" allow_duplicate_entries="False"> + <columns>value, description, interproscan_version, path</columns> + <file path="${__HERE__}/test-data/interproscan.loc" /> + </table> +</tables>