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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
author bgruening
date Wed, 28 Dec 2016 18:47:18 -0500
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Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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008f5c13670e planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
bgruening
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diff changeset
1 mLocARNA --- multiple Local (and global) Alignment of RNA --- LocARNA 1.9.0
008f5c13670e planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
bgruening
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2 Copyright Sebastian Will
008f5c13670e planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
bgruening
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008f5c13670e planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
bgruening
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4 Compute pair probs ...
008f5c13670e planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
bgruening
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5 Compute pairwise alignments ...
008f5c13670e planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
bgruening
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6 Perform progressive alignment ...
008f5c13670e planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
bgruening
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008f5c13670e planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
bgruening
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008f5c13670e planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
bgruening
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008f5c13670e planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
bgruening
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10 vhuU AG-CUCACAACCGAACCC-AU------------UUGGGAGGUUGUGAGCU-
008f5c13670e planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
bgruening
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11 fwdB AU-GUUGGAGGGGAACCC-GU------------AAGGGACCCUCCAAGAU-
008f5c13670e planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
bgruening
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12 selD UUACGAUGUGCCGAACCCUUU------------AAGGGAGGCACAUCGAAA
008f5c13670e planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
bgruening
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13 hdrA GG--CACCACUCGAAGGC--U------------AAGCCAAAGUGGUG-CU-
008f5c13670e planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
bgruening
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14 vhuD GU--UCUCUCGGGAACCCGUC------------AAGGGACCGAGAGA-AC-
008f5c13670e planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
bgruening
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15 fruA ---CCUCGAGGGGAACCC-GA------------AAGGGACCCGAGAGG---
008f5c13670e planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
bgruening
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16 fdhA CG-CCACCCUGCGAACCCAAUAUAAAAUAAUACAAGGGAGCAG-GUGGCG-
008f5c13670e planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
bgruening
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008f5c13670e planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
bgruening
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18 alifold ((.(((((((((...(((.................))).))))))))))). (-31.59 = -20.01 + -11.58)