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annotate test-data/archaea-default.stdout @ 0:b4310d79bbfb draft default tip

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
author bgruening
date Wed, 28 Dec 2016 18:48:14 -0500
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b4310d79bbfb planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
bgruening
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1 mLocARNA --- multiple Local (and global) Alignment of RNA --- LocARNA 1.9.0
b4310d79bbfb planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
bgruening
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2 Copyright Sebastian Will
b4310d79bbfb planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
bgruening
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b4310d79bbfb planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
bgruening
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4 Compute pair probs ...
b4310d79bbfb planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
bgruening
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5 Compute pairwise alignments ...
b4310d79bbfb planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
bgruening
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6 Perform progressive alignment ...
b4310d79bbfb planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
bgruening
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b4310d79bbfb planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
bgruening
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b4310d79bbfb planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
bgruening
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b4310d79bbfb planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
bgruening
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10 vhuU AG-CUCACAACCGAACCC-AU------------UUGGGAGGUUGUGAGCU-
b4310d79bbfb planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
bgruening
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11 fwdB AU-GUUGGAGGGGAACCC-GU------------AAGGGACCCUCCAAGAU-
b4310d79bbfb planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
bgruening
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12 selD UUACGAUGUGCCGAACCCUUU------------AAGGGAGGCACAUCGAAA
b4310d79bbfb planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
bgruening
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13 hdrA GG--CACCACUCGAAGGC--U------------AAGCCAAAGUGGUG-CU-
b4310d79bbfb planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
bgruening
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14 vhuD GU--UCUCUCGGGAACCCGUC------------AAGGGACCGAGAGA-AC-
b4310d79bbfb planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
bgruening
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15 fruA ---CCUCGAGGGGAACCC-GA------------AAGGGACCCGAGAGG---
b4310d79bbfb planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
bgruening
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16 fdhA CG-CCACCCUGCGAACCCAAUAUAAAAUAAUACAAGGGAGCAG-GUGGCG-
b4310d79bbfb planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
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b4310d79bbfb planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
bgruening
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18 alifold ((.(((((((((...(((.................))).))))))))))). (-31.59 = -20.01 + -11.58)