diff readme.rst @ 0:20f12e7c279b draft

Imported from capsule None
author bgruening
date Mon, 05 May 2014 04:23:26 -0400
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+Galaxy wrapper for minced
+=========================
+
+This wrapper is copyright 2014 by Björn Grüning and Omer Alkhnbashi
+
+MinCED - Mining CRISPRs in Environmental Datasets
+
+MinCED is a program to find Clustered Regularly Interspaced Short Palindromic
+Repeats (CRISPRs) in full genomes or environmental datasets such as metagenomes,
+in which sequence size can be anywhere from 100 to 800 bp. MinCED runs from the
+command-line and was derived from CRT (http://www.room220.com/crt/):
+  Charles Bland et al., CRISPR Recognition Tool (CRT): a tool for automatic
+  detection of clustered regularly interspaced palindromic repeats, BMC
+  Bioinformatics 8, no. 1 (2007): 209.
+
+https://github.com/ctSkennerton/minced
+
+
+Installation
+============
+
+Galaxy should be able to automatically install the dependencies.
+
+
+History
+=======
+
+v0.1 - Initial public release
+
+
+Licence (MIT)
+=============
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in
+all copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
+THE SOFTWARE.
+