Mercurial > repos > bgruening > nanopolish_methylation
comparison macros.xml @ 0:f9dadc362197 draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/nanopolish commit 0e94011a4ea84bf4ae5c2079680a37540e022625
| author | bgruening |
|---|---|
| date | Wed, 30 May 2018 11:55:55 -0400 |
| parents | |
| children | 709490665bad |
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| -1:000000000000 | 0:f9dadc362197 |
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| 1 <macros> | |
| 2 <xml name="requirements"> | |
| 3 <requirements> | |
| 4 <requirement type="package" version="0.9.0">nanopolish</requirement> | |
| 5 <yield/> | |
| 6 </requirements> | |
| 7 </xml> | |
| 8 | |
| 9 <!-- index outputs | |
| 10 <data name="output_index" format="nanopolish_index" from_work_dir="reads.fasta.index" /> | |
| 11 <data name="output_index_fai" format="nanopolish_index_fai" from_work_dir="reads.fasta.index.fai" /> | |
| 12 <data name="output_index_gzi" format="nanopolish_index_gzi" from_work_dir="reads.fasta.index.gzi" /> | |
| 13 <data name="output_index_readdb" format="nanopolish_index_readdb" from_work_dir="reads.fasta.index.readdb" /> | |
| 14 --> | |
| 15 <!-- <output name="output_index" file="reads.fasta.index" /> | |
| 16 <output name="output_index_fai" file="reads.fasta.index.fai" /> | |
| 17 <output name="output_index_gzi" file="reads.fasta.index.gzi" /> | |
| 18 <output name="output_index_readdb" file="reads.fasta.index.readdb" /> | |
| 19 --> | |
| 20 | |
| 21 <xml name="citations"> | |
| 22 <citations> | |
| 23 <citation type="doi">10.1038/nmeth.4184</citation> | |
| 24 <citation type="bibtex"> | |
| 25 @misc{githubnanopolish, | |
| 26 author = {LastTODO, FirstTODO}, | |
| 27 year = {TODO}, | |
| 28 title = {nanopolish}, | |
| 29 publisher = {GitHub}, | |
| 30 journal = {GitHub repository}, | |
| 31 url = {https://github.com/jts/nanopolish}, | |
| 32 }</citation> | |
| 33 <yield /> | |
| 34 </citations> | |
| 35 </xml> | |
| 36 </macros> |