Mercurial > repos > bgruening > repeat_masker

changeset 2:5673e72241aa draft

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Uploaded
author bgruening
date Tue, 17 Sep 2013 03:23:49 -0400
parents 880265000696
children bdfc22c1c3e3
files RepeatMasker.xml
diffstat 1 files changed, 4 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/RepeatMasker.xml	Tue Jun 25 08:58:21 2013 -0400
+++ b/RepeatMasker.xml	Tue Sep 17 03:23:49 2013 -0400
@@ -1,5 +1,8 @@
 <tool id="repeatmasker_wrapper" name="RepeatMasker" version="0.1.2">
     <description>Masks different kind of repeats</description>
+    <requirements>
+        <requirement type="binary">RepeatMasker</requirement>
+    </requirements>
     <command>
 ## The command is a Cheetah template which allows some Python based syntax.
 ## Lines starting hash hash are comments. Galaxy will turn newlines into spaces
@@ -154,6 +157,7 @@
             <option value="-species rat">rat</option>
             <option value="-species rice">rice</option>
             <option value="-species rodentia">rodentia</option>
+            <option value="-species ruminantia">ruminantia</option>
             <option value="-species wheat">wheat</option>
         </param>
 
@@ -211,9 +215,6 @@
             </filter>
         </data>
     </outputs>
-    <requirements>
-        <requirement type="binary">RepeatMasker</requirement>
-    </requirements>
     <help>
     
 .. class:: warningmark