view test-data/broken_ligand.sdf @ 3:b34d068c2782 draft default tip

"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/chemicaltoolbox/rxdock commit 944ea4bb8a9cd4244152a4a4fecd0485fabc2ad0"
author bgruening
date Tue, 28 Jul 2020 08:45:49 -0400
parents 35ee2e002bb0
children
line wrap: on
line source

Cc1ccsc1C1(O)CCOC1
 OpenBabel03262013053D

 18 19  0  0  1  0  0  0  0  0999 V2000
    2.6244   -0.3204    0.0030 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1487   -0.0653   -0.0019 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5577    1.2199    0.0010 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7851    1.2166   -0.0030 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4005   -0.3714    0.0020 S   0  0  0  0  0  0  0  0  0  0  0  0
    0.1829   -0.9540   -0.0102 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7593   -3.2703    1.1063 C   0  0  3  0  0  0  0  0  0  0  0  0
    0.3797   -2.5572    0.0072 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7298   -2.3113   -0.2964 C   0  0  0  0  0  2  0  0  0  0  0  0
    0.3797   -2.5572    0.0072 C   0  0  0  0  0  2  0  0  0  0  0  0
    0.3797   -2.5572    0.0072 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.3797   -2.5572    0.0072 C   0  0  0  0  0  2  0  0  0  0  0  0
    3.1460    0.6144    0.0045 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8955   -0.8785   -0.8702 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8896   -0.8781    0.8782 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1148    2.0915    0.0058 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3714    2.0694   -0.0084 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6424   -1.9351    0.5862 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  1 13  1  0  0  0  0
  1 14  1  0  0  0  0
  1 15  1  0  0  0  0
  2  3  1  0  0  0  0
  2  6  2  0  0  0  0
  3  4  2  0  0  0  0
  3 16  1  0  0  0  0
  4  5  1  0  0  0  0
  4 17  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  7  9  1  0  0  0  0
  7 12  1  0  0  0  0
  8 18  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
M  END
$$$$
1S3V
 OpenBabel07031809403D

 54 56  0  0  1  0  0  0  0  0999 V2000
   -0.0237   32.0851    0.4630 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0257   32.5701    2.5090 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5816   31.2781    2.5290 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2645   30.7721    3.8370 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1514   29.5300    3.5680 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.3824   28.4990    2.7070 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7845   29.0260    1.3530 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3126   30.4241    1.4480 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6244   28.9840    4.9610 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2442   26.5599    4.7800 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1391   25.6479    4.2580 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8561   24.2849    4.1780 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0120   23.8848    3.0290 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6611   23.8468    4.6560 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5581   22.0928    3.4830 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7132   24.7349    5.1800 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4583   25.1339    6.0060 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0123   26.0899    5.2580 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4676   30.8241    0.4170 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.8412   32.3751   -0.5420 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2388   32.9722    1.4960 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2847   33.4632    3.4970 N   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6273   27.9210    4.8320 N   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8230   23.4168    3.6560 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1441   22.5778    4.6930 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5192   24.2169    5.6340 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0522   28.2910    4.7350 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8817   31.5647    4.2416 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4982   30.5088    4.5555 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0329   29.7742    2.9881 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0645   27.6908    2.4734 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5623   28.1183    3.3032 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5506   28.9693    0.5897 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9492   28.3958    1.0737 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0540   29.8010    5.5275 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7656   28.5900    5.4903 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0962   26.0040    3.8974 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7524   24.4932    2.1715 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.6062   23.0393    2.7052 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.5820   24.4781    3.7333 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7376   22.7384    3.1952 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1884   21.0868    3.6389 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3042   22.0856    2.6981 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8011   25.7764    6.8076 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4051   24.5711    6.3386 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1871   25.7386    5.1495 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2964   26.7805    5.6864 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2433   33.2980   -0.6110 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0822   31.6679   -1.2201 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8759   34.3850    3.4637 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8862   33.2055    4.2651 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2045   28.9156    3.8635 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6528   27.3942    4.6458 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3454   28.8348    5.6245 H   0  0  0  0  0  0  0  0  0  0  0  0
  1 19  1  0  0  0  0
  1 20  1  0  0  0  0
  2 22  1  0  0  0  0
  3  2  2  0  0  0  0
  3  8  1  0  0  0  0
  4  3  1  0  0  0  0
  4 28  1  0  0  0  0
  4 29  1  0  0  0  0
  5  4  1  0  0  0  0
  5  6  1  0  0  0  0
  5  9  1  0  0  0  0
  5 30  1  6  0  0  0
  6  7  1  0  0  0  0
  6 31  1  0  0  0  0
  6 32  1  0  0  0  0
  7  8  1  0  0  0  0
  7 33  1  0  0  0  0
  7 34  1  0  0  0  0
  8 19  2  0  0  0  0
  9 35  1  0  0  0  0
  9 36  1  0  0  0  0
 11 10  2  0  0  0  0
 11 37  1  0  0  0  0
 12 11  1  0  0  0  0
 13 38  1  0  0  0  0
 13 39  1  0  0  0  0
 13 40  1  0  0  0  0
 14 12  2  0  0  0  0
 15 25  1  0  0  0  0
 15 41  1  0  0  0  0
 15 42  1  0  0  0  0
 15 43  1  0  0  0  0
 16 14  1  0  0  0  0
 16 26  1  0  0  0  0
 17 26  1  0  0  0  0
 17 44  1  0  0  0  0
 17 45  1  0  0  0  0
 17 46  1  0  0  0  0
 18 10  1  0  0  0  0
 18 16  2  0  0  0  0
 18 47  1  0  0  0  0
 20 48  1  0  0  0  0
 20 49  1  0  0  0  0
 21  1  2  0  0  0  0
 21  2  1  0  0  0  0
 22 50  1  0  0  0  0
 22 51  1  0  0  0  0
 23  9  1  0  0  0  0
 23 10  1  0  0  0  0
 23 27  1  0  0  0  0
 24 12  1  0  0  0  0
 24 13  1  0  0  0  0
 25 14  1  0  0  0  0
 27 52  1  0  0  0  0
 27 53  1  0  0  0  0
 27 54  1  0  0  0  0
M  END
$$$$