annotate README.rst @ 0:3b4ed0e473dc draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
author bgruening
date Fri, 16 Oct 2015 15:09:03 -0400
parents
children 1b4ed566a41c
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
1 Galaxy wrappers for sailfish
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
2 =====================================
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
3
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
4 These wrappers are copyright 2014 by Björn Grüning and additional contributors.
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
5 All rights reserved. See the licence text below.
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
6
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
7 Currently tested with sailfish 0.6.3.
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
8
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
9
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
10 Automated Installation
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
11 ======================
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
12
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
13 Galaxy should be able to automatically install the sailfish for you.
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
14
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
15
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
16 History
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
17 =======
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
18
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
19 ======== ======================================================================
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
20 Version Changes
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
21 -------- ----------------------------------------------------------------------
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
22 v0.6.3.0 - First release
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
23
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
24 ======== ======================================================================
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
25
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
26
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
27 Bug Reports
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
28 ===========
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
29
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
30 You can file an issue here https://github.com/bgruening/galaxytools/issues or ask
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
31 us on the Galaxy development list http://lists.bx.psu.edu/listinfo/galaxy-dev
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
32
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
33
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
34 Licence (MIT)
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
35 =============
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
36
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
37 Permission is hereby granted, free of charge, to any person obtaining a copy
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
38 of this software and associated documentation files (the "Software"), to deal
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
39 in the Software without restriction, including without limitation the rights
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
40 to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
41 copies of the Software, and to permit persons to whom the Software is
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
42 furnished to do so, subject to the following conditions:
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
43
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
44 The above copyright notice and this permission notice shall be included in
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
45 all copies or substantial portions of the Software.
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
46
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
47 THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
48 IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
49 FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
50 AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
51 LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
52 OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
3b4ed0e473dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit bd2dd2419ea52f30cd7de2f7109a12b49b5d0dba-dirty
bgruening
parents:
diff changeset
53 THE SOFTWARE.