Mercurial > repos > bgruening > sklearn_generalized_linear

diff generalized_linear.xml @ 24:b628de0d101f draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit ab963ec9498bd05d2fb2f24f75adb2fccae7958c
author: bgruening
date: Wed, 15 May 2019 07:40:56 -0400
parents: e3bc646e63b2
children: 9d3a024cf2da
--- a/generalized_linear.xml	Sun Dec 30 02:01:29 2018 -0500
+++ b/generalized_linear.xml	Wed May 15 07:40:56 2019 -0400
@@ -19,11 +19,11 @@
 import numpy as np
 import sklearn.linear_model
 import pandas
+import pickle
 from scipy.io import mmread
 
-with open("$__tool_directory__/sk_whitelist.json", "r") as f:
-    sk_whitelist = json.load(f)
-exec(open("$__tool_directory__/utils.py").read(), globals())
+sys.path.insert(0, '$__tool_directory__')
+from utils import load_model, get_X_y
 
 input_json_path = sys.argv[1]
 with open(input_json_path, "r") as param_handler: