Mercurial > repos > bgruening > trim_galore

diff tool_dependencies.xml @ 2:9109c2c3be1e draft

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Uploaded
author bgruening
date Fri, 19 Jul 2013 09:37:45 -0400
parents 3c1664caa8e3
children 2c1f0fe810f7
line wrap: on
line diff
--- a/tool_dependencies.xml	Wed Jul 17 15:05:43 2013 -0400
+++ b/tool_dependencies.xml	Fri Jul 19 09:37:45 2013 -0400
@@ -20,23 +20,6 @@
         <readme>
         </readme>
     </package>
-    <package name="fastqc" version="0.10.1">
-        <install version="1.0">
-            <actions>
-                <action type="download_by_url">http://www.bioinformatics.babraham.ac.uk/projects/fastqc/fastqc_v0.10.1.zip</action>
-                <action type="move_directory_files">
-                    <source_directory>../FastQC/</source_directory>
-                    <destination_directory>$INSTALL_DIR/FastQC</destination_directory>
-                </action>
-                <action type="set_environment">
-                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/FastQC</environment_variable>
-                </action>
-            </actions>
-        </install>
-        <readme>
-        FastQC needs a java Runtime Environment.
-        </readme>
-    </package>
 </tool_dependency>