Mercurial > repos > big-tiandm > degseq

diff tool_dependencies.xml @ 19:32970aaa6af8 draft

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Uploaded
author big-tiandm
date Sat, 15 Nov 2014 00:45:15 -0500
parents 531d88d40600
children 94bc6d663e36
line wrap: on
line diff
--- a/tool_dependencies.xml	Sat Nov 15 00:44:55 2014 -0500
+++ b/tool_dependencies.xml	Sat Nov 15 00:45:15 2014 -0500
@@ -6,9 +6,7 @@
 
 	<package name="R" version="3.0.1">
 	   <repository changeset_revision="c5ff6dd33c79" name="package_r_3_0_1" owner="iuc" toolshed="http://toolshed.g2.bx.psu.edu" prior_installation_required="True"/>
-	</package>
 
-	<package name="degseq" version="1.20.0">
 		<install version="1.0">
 		   <actions>
 		      <action type="set_environment_for_install">
@@ -18,18 +16,9 @@
               </action>
 		      <action type="shell_command">R CMD BATCH $REPOSITORY_INSTALL_DIR/install_DEG.R </action>
 
-			  
-
-			  <action type="set_environment">
-                 <environment_variable name="PATH" action="prepend_to">$R_PATH</environment_variable>
-              </action>
-		   
-		   </actions>
+		 </actions>
 		</install>
-
-
 	</package>
 
 
-
 </tool_dependency>