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changeset 507:20e135a73cad draft

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Uploaded
author francesco_lapi
date Wed, 01 Oct 2025 13:51:50 +0000
parents ffc234ec80db
children ca98c149ec61
files COBRAxy/ras_to_bounds.py
diffstat 1 files changed, 2 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/COBRAxy/ras_to_bounds.py	Wed Oct 01 13:19:03 2025 +0000
+++ b/COBRAxy/ras_to_bounds.py	Wed Oct 01 13:51:50 2025 +0000
@@ -180,8 +180,8 @@
             
             compartments = modelUtils.generate_compartments(model)
 
-            df_rules = pd.DataFrame(list(rules.items()), columns = ["ReactionID", "Rule"])
-            df_reactions = pd.DataFrame(list(reactions.items()), columns = ["ReactionID", "Reaction"])
+            df_rules = pd.DataFrame(list(rules.items()), columns = ["ReactionID", "GPR"])
+            df_reactions = pd.DataFrame(list(reactions.items()), columns = ["ReactionID", "Formula"])
             df_bounds = bounds.reset_index().rename(columns = {"index": "ReactionID"})
             df_medium = medium.rename(columns = {"reaction": "ReactionID"})
             df_medium["InMedium"] = True