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changeset 116:734cc52537da draft

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Uploaded
author luca_milaz
date Sun, 13 Oct 2024 16:17:42 +0000
parents 867a965d6a57
children 69190617d1ea
files COBRAxy/ras_to_bounds.py
diffstat 1 files changed, 2 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- a/COBRAxy/ras_to_bounds.py	Sun Oct 13 16:15:50 2024 +0000
+++ b/COBRAxy/ras_to_bounds.py	Sun Oct 13 16:17:42 2024 +0000
@@ -124,6 +124,7 @@
         None
     """
     warning(str(model.reactions.get_by_id("EX_Lcystin_e").lower_bound))
+    warning(str(model.reactions.get_by_id("EX_Lcystin_e").upper_bound))
     for reaction in rxns_ids:
         if reaction in ras_row.index: #and reaction not in mediumRxns_ids
             scaling_factor = ras_row[reaction]
@@ -139,6 +140,7 @@
                 model.reactions.get_by_id(reaction).lower_bound=valMin
                 model.reactions.get_by_id(reaction).upper_bound=valMax
     warning(str(model.reactions.get_by_id("EX_Lcystin_e").lower_bound))
+    warning(str(model.reactions.get_by_id("EX_Lcystin_e").upper_bound))
     pass
 
 def process_ras_cell(cellName, ras_row, model, rxns_ids, mediumRxns_ids, output_folder):