Mercurial > repos > bimib > cobraxy

changeset 166:a057458bfa4e draft

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Uploaded
author luca_milaz
date Mon, 18 Nov 2024 17:22:33 +0000
parents 2be342a25cdb
children eefe693b2fdd
files COBRAxy/flux_to_map.xml
diffstat 1 files changed, 4 insertions(+), 4 deletions(-) [+]
line wrap: on
line diff
--- a/COBRAxy/flux_to_map.xml	Mon Nov 18 17:20:03 2024 +0000
+++ b/COBRAxy/flux_to_map.xml	Mon Nov 18 17:22:33 2024 +0000
@@ -154,10 +154,10 @@
     - custom svg map. Graphical elements must have the same IDs of reactions. See HmrCore svg map for an example.
 
 The tool generates:
-    - 1) a tab-separated file: reporting fold-change and p-values of fluxes between a pair of conditions/classes;
-    - 2) a metabolic map file (downloadable as .svg and .png): visualizing up- and down-regulated reactions between a pair of conditions/classes;
-	- 3) two metabolic maps to visualize the mean and median fluxes normalized amongst all classes. The associated color map is also generated;
-    - 4) a log file (.txt).
+    - A tab-separated file: reporting fold-change and p-values of fluxes between a pair of conditions/classes;
+    - A metabolic map file (downloadable as .svg and .png): visualizing up- and down-regulated reactions between a pair of conditions/classes;
+	- Two metabolic maps to visualize the mean and median fluxes normalized amongst all classes. The associated color map is also generated;
+    - A log file (.txt).
 
 Output options:
 	- To calculate P-Values and Fold-Changes and to enrich maps, comparisons are performed for each possible pair of groups (default option ‘One vs One’).