Mercurial > repos > bitlab > plidflow

comparison PLIDflow/scripts/separateChain.sh @ 0:6fcfa4756040 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author bitlab
date Tue, 14 Jan 2020 06:09:42 -0500
parents
children
comparison
equal deleted inserted replaced
-1:000000000000 0:6fcfa4756040
1 #!/bin/bash
2
3 # Arguments
4 # $1 = pdb
5
6 grep "ATOM\|HETATM" $1 | awk '{ if(length($5)==1) updateName=$5; if($1 == "ATOM" || $1 == "HETATM"){ print $0 > "chain"updateName".pdb"; }}' ;
7 for i in chain* ; do echo "TER" >> $i ; echo "END" >> $i ; done