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annotate tool_dependencies.xml @ 4:b97259dc9149

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Update clone command.
author Daniel Blankenberg <dan@bx.psu.edu>
date Tue, 04 Feb 2014 17:02:51 -0500
parents de60d1631ce4
children 102e3710dbdc
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="pyBamTools" version="0.0.1">
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4 <install version="1.0">
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5 <actions>
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6 <action type="shell_command">hg clone -r 2f0e7841b3b65c4e8f65d02b300dcc28c10ebe26 https://bitbucket.org/dan/pybamtools pyBamTools</action>
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7 <action type="make_directory">$INSTALL_DIR/lib/python</action>
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8 <action type="shell_command">export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; python setup.py install --home $INSTALL_DIR</action>
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9 <action type="set_environment">
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10 <environment_variable name="PYTHONPATH" action="prepend_to">$INSTALL_DIR/lib/python</environment_variable>
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11 </action>
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12 </actions>
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13 </install>
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14 <readme>
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15 Installs pyBamTools libraries.
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16 </readme>
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17 </package>
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18 </tool_dependency>