Mercurial > repos > blankenberg > package_pybamtools_0_0_1

comparison tool_dependencies.xml @ 10:b1ffa753298f

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Update checkout revision.
author Daniel Blankenberg <dan@bx.psu.edu>
date Tue, 03 Feb 2015 15:03:48 -0500
parents b4731df95f53
children 9116288f9d4c
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9:b4731df95f53 10:b1ffa753298f
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="pyBamTools" version="0.0.1"> 3 <package name="pyBamTools" version="0.0.1">
4 <install version="1.0"> 4 <install version="1.0">
5 <actions> 5 <actions>
6 <action type="shell_command">hg clone -r 85ecc28d39c62ea9c1866dcb8e38a9b66d56cd0c https://bitbucket.org/dan/pybamtools pyBamTools</action> 6 <action type="shell_command">hg clone -r 4a1bcf3d85fabc0f74b854279fc276e3ea8af11f https://bitbucket.org/dan/pybamtools pyBamTools</action>
7 <action type="make_directory">$INSTALL_DIR/lib/python</action> 7 <action type="make_directory">$INSTALL_DIR/lib/python</action>
8 <action type="shell_command">export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; python setup.py install --home $INSTALL_DIR</action> 8 <action type="shell_command">export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; python setup.py install --home $INSTALL_DIR</action>
9 <action type="set_environment"> 9 <action type="set_environment">
10 <environment_variable name="PYTHONPATH" action="prepend_to">$INSTALL_DIR/lib/python</environment_variable> 10 <environment_variable name="PYTHONPATH" action="prepend_to">$INSTALL_DIR/lib/python</environment_variable>
11 </action> 11 </action>