Mercurial > repos > blankenberg > package_pybamtools_0_0_1

view tool_dependencies.xml @ 10:b1ffa753298f

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Update checkout revision.
author Daniel Blankenberg <dan@bx.psu.edu>
date Tue, 03 Feb 2015 15:03:48 -0500
parents b4731df95f53
children 9116288f9d4c
line wrap: on
line source

<?xml version="1.0"?>
<tool_dependency>
    <package name="pyBamTools" version="0.0.1">
        <install version="1.0">
            <actions>
                <action type="shell_command">hg clone -r 4a1bcf3d85fabc0f74b854279fc276e3ea8af11f https://bitbucket.org/dan/pybamtools pyBamTools</action>
                <action type="make_directory">$INSTALL_DIR/lib/python</action>
                <action type="shell_command">export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; python setup.py install --home $INSTALL_DIR</action> 
                <action type="set_environment">
                    <environment_variable name="PYTHONPATH" action="prepend_to">$INSTALL_DIR/lib/python</environment_variable>
                </action>
            </actions>
        </install>
        <readme>
Installs pyBamTools libraries.
        </readme>
    </package>
</tool_dependency>