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view tool_dependencies.xml @ 9:b4731df95f53

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Update checkout revision.
author Daniel Blankenberg <dan@bx.psu.edu>
date Fri, 30 Jan 2015 16:51:44 -0500
parents b6217f6ab3b5
children b1ffa753298f
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<?xml version="1.0"?>
<tool_dependency>
    <package name="pyBamTools" version="0.0.1">
        <install version="1.0">
            <actions>
                <action type="shell_command">hg clone -r 85ecc28d39c62ea9c1866dcb8e38a9b66d56cd0c https://bitbucket.org/dan/pybamtools pyBamTools</action>
                <action type="make_directory">$INSTALL_DIR/lib/python</action>
                <action type="shell_command">export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; python setup.py install --home $INSTALL_DIR</action> 
                <action type="set_environment">
                    <environment_variable name="PYTHONPATH" action="prepend_to">$INSTALL_DIR/lib/python</environment_variable>
                </action>
            </actions>
        </install>
        <readme>
Installs pyBamTools libraries.
        </readme>
    </package>
</tool_dependency>