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comparison dotplot_runner.xml @ 5:dc2aed283637 draft

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author bornea
date Fri, 29 Jan 2016 10:14:36 -0500
parents 01854b858767
children b4bb92033d59
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4:a0b4bcf67972 5:dc2aed283637
36 <param name="input" value="fa_gc_content_input.fa"/> 36 <param name="input" value="fa_gc_content_input.fa"/>
37 <output name="out_file1" file="fa_gc_content_output.txt"/> 37 <output name="out_file1" file="fa_gc_content_output.txt"/>
38 </test> 38 </test>
39 </tests> 39 </tests>
40 <help> 40 <help>
41 **Running ProHits DotPlot**
42
43 This runs the biclustering version of the DotPlot tool found at http://prohitstools.mshri.on.ca/. A more interactive version can be found at http://prohits-viz.lunenfeld.ca/.
44
45 INPUTS:
46
47 Saint Output: SAINTexpress generated "list.txt" file.
48
49 Primary False Discovery Rate
50
51 Secondary False Discovery Rate
52
53 Maximum Spectral Count
54
55 ------
56
57 **Please cite**
58
59 * Knight, J.D., Liu, G., Zhang, J., Pasculescu, A., Choi, H., and Gingras, A.-C. (2014) A web-tool for visualizing quantitative protein-protein interaction data. Proteomics, in press. PMID:25422071.
60
41 </help> 61 </help>
42 </tool> 62 </tool>