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changeset 12:6d750e5e72e2 draft

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Uploaded
author bornea
date Tue, 10 Nov 2015 12:08:02 -0500
parents e911513d5ee3
children aaf9cfbaee2f
files tool_dependencies.xml
diffstat 1 files changed, 19 insertions(+), 0 deletions(-) [+]
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line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Tue Nov 10 12:08:02 2015 -0500
@@ -0,0 +1,19 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <!--<set_environment version="1.0">
+        <environment_variable name="R_SCRIPT_PATH" action="set_to">$REPOSITORY_INSTALL_DIR/bubblebeam</environment_variable>   
+    </set_environment>-->
+    <package name="saintexpress">
+        <install>
+            <actions>
+                <action type="shell_command">git clone http://github.com/bornea/Saint_On_Galaxy</action>
+                <action type="shell_command">unzip SAINTexpress_v3.6.1__2015-05-03.zip</action>
+                <action type="shell_command">./make -j</action>
+                <action type="set_environment">
+                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/Saint_On_Galaxy/SAINTexpress_v3.6.1__2015-05-03/bin</environment_variable>
+                </action>
+            </actions>
+        </install>
+        <readme></readme>
+    </package>
+</tool_dependency>
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