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1
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2 <!DOCTYPE html>
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3 <html lang="en">
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4 <head>
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5 <meta charset="utf-8">
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6 <title>pipeline</title>
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7 <meta name="viewport" content="width=device-width, initial-scale=1.0">
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8 <meta name="description" content="">
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9 <meta name="author" content="">
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10 <!-- Le styles -->
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11 <link href="css/bootstrap.css" rel="stylesheet">
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12 <link href="css/bootstrap-table.css" rel="stylesheet">
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13 <style type="text/css">
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14 body {
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15 padding-top: 60px;
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16 padding-bottom: 40px;
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17 }
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18 div#page {
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19 width: 940px;
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20 background-color: #fff;
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21 margin: 0 auto;
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22 text-align: left;
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23 border-color: #fff;
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24 border-style: none solid solid;
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25 border-width: medium 1px 1px;
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26 }
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27
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28 div.content {
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29 display: none;
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30 float: right;
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31 width: 550px;
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32 }
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33 div.content a, div.navigation a {
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34 text-decoration: none;
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35 color: #777;
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36 }
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37 div.content a:focus, div.content a:hover, div.content a:active {
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38 text-decoration: underline;
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39 }
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40
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41 div.controls {
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42 margin-top: 5px;
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43 height: 23px;
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44 }
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45
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46 div.controls a {
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47 padding: 5px;
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48 }
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49 div.ss-controls {
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50 float: left;
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51 }
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52 div.nav-controls {
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53 float: right;
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54 }
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55 div.slideshow-container {
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56 position: relative;
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57 clear: both;
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58 height: 502px; /* This should be set to be at least the height of the largest image in the slideshow */
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59 }
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60 div.loader {
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61 position: absolute;
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62 top: 0;
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63 left: 0;
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64 background-image: url('loader.gif');
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65 background-repeat: no-repeat;
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66 background-position: center;
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67 width: 550px;
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68 height: 502px; /* This should be set to be at least the height of the largest image in the slideshow */
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69 }
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70 div.slideshow {
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71
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72 }
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73
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74 div.slideshow span.image-wrapper {
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75 display: block;
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76 position: absolute;
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77 top: 0;
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78 left: 0;
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79 }
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80 div.slideshow a.advance-link {
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81 display: block;
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82 width: 550px;
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83 height: 502px; /* This should be set to be at least the height of the largest image in the slideshow */
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84 line-height: 502px; /* This should be set to be at least the height of the largest image in the slideshow */
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85 text-align: center;
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86 }
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87 div.slideshow a.advance-link:hover, div.slideshow a.advance-link:active, div.slideshow a.advance-link:visited {
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88 text-decoration: none;
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89 }
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90 div.slideshow img {
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91 vertical-align: middle;
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92 border: 1px solid #ccc;
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93 }
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94
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95 div.image-title {
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96 font-weight: bold;
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97 font-size: 1.4em;
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98 }
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99
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100 div.image-desc {
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101 line-height: 1.3em;
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102 padding-top: 12px;
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103 }
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104 div.navigation {
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105
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106 }
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107 ul.thumbs {
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108 clear: both;
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109 margin: 0;
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110 padding: 0;
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111 }
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112 ul.thumbs li {
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113 float: none;
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114 padding: 0;
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115 margin: 0;
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116 list-style: none;
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117 }
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118 a.thumb {
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119 padding: 0;
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120 display: inline;
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121 border: none;
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122 }
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123 ul.thumbs li.selected a.thumb {
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124 color: #000;
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125 font-weight: bold;
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126 }
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127 a.thumb:focus {
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128 outline: none;
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129 }
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130 ul.thumbs img {
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131 border: none;
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132 display: block;
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133 }
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134 div.pagination {
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135 clear: both;
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136 }
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137 div.navigation div.top {
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138 margin-bottom: 12px;
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139 height: 11px;
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140 }
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141 div.navigation div.bottom {
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142 margin-top: 12px;
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143 }
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144 div.pagination a, div.pagination span.current, div.pagination span.ellipsis {
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145 display: block;
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146 float: left;
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147 margin-right: 2px;
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148 padding: 4px 7px 2px 7px;
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149 border: 1px solid #ccc;
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150 }
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151 div.pagination a:hover {
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152 background-color: #eee;
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153 text-decoration: none;
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154 }
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155 div.pagination span.current {
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156 font-weight: bold;
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157 background-color: #000;
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158 border-color: #000;
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159 color: #fff;
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160 }
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161 div.pagination span.ellipsis {
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162 border: none;
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163 padding: 5px 0 3px 2px;
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164 }
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165
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166 div.download {
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167 float: right;
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168 }
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169
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170 div.caption-container {
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171 position: relative;
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172 clear: left;
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173 height: 75px;
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174 }
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175 span.image-caption {
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176 display: block;
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177 position: absolute;
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178 width: 550px;
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179 top: 0;
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180 left: 0;
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181 }
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182 div.caption {
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183 padding: 12px;
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184 }
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185
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186 /* Featurettes
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187 ------------------------- */
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188
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189 .featurette {
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190 padding-top: 20px; /* Vertically center images part 1: add padding above and below text. */
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191 overflow: hidden; /* Vertically center images part 2: clear their floats. */
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192 text-align: center;
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193 }
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194
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195 .featurette-p
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196 {
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197 text-align: left;
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198 }
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199
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200 .featurette-image {
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201 margin-top: 10px; /* Vertically center images part 3: negative margin up the image the same amount of the padding to center it. */
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202 width: 450px;
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203 height: auto;
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204 }
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205
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206 </style>
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207 <link href="css/bootstrap-responsive.css" rel="stylesheet">
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208 </head>
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209 <body>
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210
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211 <div class="navbar navbar-inverse navbar-fixed-top">
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212 <div class="navbar-inner">
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213 <div class="container">
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214 <button type="button" class="btn btn-navbar" data-toggle="collapse" data-target=".nav-collapse">
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215 <span class="icon-bar"></span>
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216 <span class="icon-bar"></span>
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217 <span class="icon-bar"></span>
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218 </button>
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219 <a class="brand" href="report.txt">Report</a>
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220 <div class="nav-collapse collapse">
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221 <ul class="nav">
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222 <li class="active"><a href="reads-sample-small.fastq.html">reads-sample-small.fastq</a></li>
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223 </ul>
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224 </div><!--/.nav-collapse -->
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225 </div>
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226 </div>
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227 </div><div class="container"> <table class="wb-tables table table-striped table-hover">
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228 <thead>
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229 <tr>
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230 <th data-sortable="true">ID</th>
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231 <th data-sortable="true">overlap sum</th>
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232 <th data-sortable="true">ten overlap sum</th>
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233 <th data-sortable="true">mean</th>
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234 <th data-sortable="true">standard deviation</th>
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235 <th data-sortable="true">z-score</th>
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236 <th data-sortable="true">p-value</th>
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237 </tr>
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238 </thead>
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239 <tbody><tr><td> <a href="reads-sample-small.fastq/subgroups/PPPartners/BATUMI_I.html">BATUMI_I</a> </td><td> 92 </td><td> 22 </td><td> 4 </td><td> 6.26931797136554 </td><td> 2.87112570812537 </td><td> 0.00204506417965455 </td>
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240 </tr><tr><td> <a href="reads-sample-small.fastq/subgroups/PPPartners/BATUMI_LTR.html">BATUMI_LTR</a> </td><td> 13 </td><td> 1 </td><td> 0.565217391304348 </td><td> 0.824941998304795 </td><td> 0.52704627669473 </td><td> 0.299080726341764 </td>
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241 </tr><tr><td> <a href="reads-sample-small.fastq/subgroups/PPPartners/BS2.html">BS2</a> </td><td> 4418 </td><td> 610 </td><td> 192.086956521739 </td><td> 94.6508058457982 </td><td> 4.41531416181612 </td><td> 5.04316992888665e-06 </td>
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242 </tr><tr><td> COPIA_DM_I </td>
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243 <td> 0 </td><td> 0 </td><td> 0 </td><td> 0 </td><td> NA </td><td> NA </td>
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244 </tr><tr><td> COPIA_DM_LTR </td>
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245 <td> 0 </td><td> 0 </td><td> 0 </td><td> 0 </td><td> NA </td><td> NA </td>
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246 </tr><tr><td> <a href="reads-sample-small.fastq/subgroups/PPPartners/DMCR1A.html">DMCR1A</a> </td><td> 109 </td><td> 30 </td><td> 4.73913043478261 </td><td> 6.40799359023961 </td><td> 3.94208720865353 </td><td> 4.03877968415678e-05 </td>
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247 </tr><tr><td> <a href="reads-sample-small.fastq/subgroups/PPPartners/DMRT1B.html">DMRT1B</a> </td><td> 299 </td><td> 13 </td><td> 13 </td><td> 10.8266980794861 </td><td> 0 </td><td> 0.5 </td>
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248 </tr><tr><td> <a href="reads-sample-small.fastq/subgroups/PPPartners/FW.html">FW</a> </td><td> 9995 </td><td> 1042 </td><td> 434.565217391304 </td><td> 141.421610207381 </td><td> 4.29520482561295 </td><td> 8.7266059448643e-06 </td>
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249 </tr><tr><td> <a href="reads-sample-small.fastq/subgroups/PPPartners/G6_DM.html">G6_DM</a> </td><td> 1084 </td><td> 129 </td><td> 47.1304347826087 </td><td> 28.7512636362392 </td><td> 2.84751189558847 </td><td> 0.0022031223713177 </td>
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250 </tr><tr><td> Gypsy2-I_DM </td>
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251 <td> 0 </td><td> 0 </td><td> 0 </td><td> 0 </td><td> NA </td><td> NA </td>
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252 </tr><tr><td> <a href="reads-sample-small.fastq/subgroups/PPPartners/Gypsy2-LTR_DM.html">Gypsy2-LTR_DM</a> </td><td> 170 </td><td> 20 </td><td> 7.39130434782609 </td><td> 4.341299449171 </td><td> 2.90435981203315 </td><td> 0.00184002483108026 </td>
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253 </tr><tr><td> <a href="reads-sample-small.fastq/subgroups/PPPartners/I_DM.html">I_DM</a> </td><td> 2 </td><td> 1 </td><td> 0.0869565217391304 </td><td> 0.281771334713385 </td><td> 3.24037034920393 </td><td> 0.000596872722436026 </td>
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254 </tr><tr><td> <a href="reads-sample-small.fastq/subgroups/PPPartners/MAX_I.html">MAX_I</a> </td><td> 54 </td><td> 11 </td><td> 2.34782608695652 </td><td> 2.44253424438055 </td><td> 3.5422938011818 </td><td> 0.00019833170283523 </td>
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255 </tr><tr><td> <a href="reads-sample-small.fastq/subgroups/PPPartners/MAX_LTR.html">MAX_LTR</a> </td><td> 16 </td><td> 0 </td><td> 0.695652173913043 </td><td> 1.75535906419012 </td><td> -0.396301923694456 </td><td> 0.654058845865745 </td>
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256 </tr><tr><td> <a href="reads-sample-small.fastq/subgroups/PPPartners/PROTOP.html">PROTOP</a> </td><td> 49 </td><td> 11 </td><td> 2.1304347826087 </td><td> 2.30885531258291 </td><td> 3.84154224348902 </td><td> 6.11318444337927e-05 </td>
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257 </tr><tr><td> ZAM_I </td>
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258 <td> 0 </td><td> 0 </td><td> 0 </td><td> 0 </td><td> NA </td><td> NA </td>
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259 </tr><tr><td> ZAM_LTR </td>
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260 <td> 0 </td><td> 0 </td><td> 0 </td><td> 0 </td><td> NA </td><td> NA </td>
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261 </tr></tbody></table></div>
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262 <!-- FOOTER -->
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263 <div class="container">
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264 <footer>
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265
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266 </footer>
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267 </div>
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268 <!-- Le javascript
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269 ================================================== -->
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270 <!-- Placed at the end of the document so the pages load faster -->
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271 <script type="text/javascript" src="js/filter.js"></script>
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272 <script type="text/javascript" src="js/jquery.js"></script>
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273 <script type="text/javascript" src="js/jquery-1.3.2.js"></script>
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274 <script type="text/javascript" src="js/jquery.galleriffic.js"></script>
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275 <script type="text/javascript" src="js/jquery.opacityrollover.js"></script>
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276 <script type="text/javascript" src="js/bootstrap-table.js"></script>
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277 <script type="text/javascript" src="js/bootstrap.min.js"></script>
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278 <script type="text/javascript">
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279 jQuery(document).ready(function($) {
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280 // We only want these styles applied when javascript is enabled
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281 $('div.navigation').css({'width' : '300px', 'float' : 'left'});
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282 $('div.content').css('display', 'block');
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283
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284 $(".each-gallery").each(function(i){
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285 // Initially set opacity on thumbs and add
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286 // additional styling for hover effect on thumbs
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287 var onMouseOutOpacity = 0.67;
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288 $('#thumbs + i + ul.thumbs li').opacityrollover({
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289 mouseOutOpacity: onMouseOutOpacity,
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290 mouseOverOpacity: 1.0,
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291 fadeSpeed: 'fast',
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292 exemptionSelector: '.selected'
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293 });
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294
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295 // Initialize Advanced Galleriffic Gallery
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296 var gallery = $('#thumbs'+i).galleriffic({
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297 delay: 2500,
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298 numThumbs: 22,
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299 preloadAhead: 10,
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300 enableTopPager: true,
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301 enableBottomPager: true,
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302 maxPagesToShow: 7,
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303 imageContainerSel: '#slideshow'+ i,
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304 controlsContainerSel: '#controls' + i,
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305 captionContainerSel: '#caption' + i,
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306 loadingContainerSel: '#loading' + i,
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307 renderSSControls: true,
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308 renderNavControls: true,
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309 playLinkText: 'Play',
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310 pauseLinkText: 'Pause',
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311 prevLinkText: '‹ Previous',
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312 nextLinkText: 'Next ›',
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313 nextPageLinkText: 'Next ›',
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314 prevPageLinkText: '‹ Prev',
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315 enableHistory: false,
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316 autoStart: false,
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317 syncTransitions: true,
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318 defaultTransitionDuration: 900,
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319 onSlideChange: function(prevIndex, nextIndex) {
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320 // 'this' refers to the gallery, which is an extension of $('#thumbs')
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321 this.find('ul.thumbs').children()
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322 .eq(prevIndex).fadeTo('fast', onMouseOutOpacity).end()
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323 .eq(nextIndex).fadeTo('fast', 1.0);
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324 },
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325 onPageTransitionOut: function(callback) {
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326 this.fadeTo('fast', 0.0, callback);
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327 },
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328 onPageTransitionIn: function() {
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329 this.fadeTo('fast', 1.0);
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330 }
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331 });
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332 });
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333 });
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334 </script>
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335 </body>
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336 </html>
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337 |
