Mercurial > repos > brasset_jensen > srnapipe

diff sRNAPipe.xml @ 64:967512924317 draft

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planemo upload for repository https://github.com/GReD-Clermont/sRNAPipe/ commit 410509088292be0687b8da3ea3bb75e72866a87d
author brasset_jensen
date Mon, 28 Jan 2019 11:57:15 -0500
parents 11708af40030
children 0e9adbd82bb4
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--- a/sRNAPipe.xml	Thu Jan 24 13:09:46 2019 -0500
+++ b/sRNAPipe.xml	Mon Jan 28 11:57:15 2019 -0500
@@ -36,7 +36,7 @@
         <requirement type="package" version="1.1_2">r-rcolorbrewer</requirement>
         <requirement type="package" version="2.2.1">r-ggplot2</requirement>
     </requirements>
-    <version_command>perl '$__tool_directory__/bin/sRNAPipe.pl'</version_command>
+    <version_command>perl '$__tool_directory__/bin/sRNAPipe.pl' | grep 'version' | grep "version" | cut -d ' ' -f 3</version_command>
     <command detect_errors="aggressive"><![CDATA[
         perl '$__tool_directory__/bin/sRNAPipe.pl'