Mercurial > repos > brasset_jensen > srnapipe
view test-data/res_files/reads-sample-small.fastq/subgroups/bonafide_reads/bonafide_reads-TEs_plus.bedgraph @ 74:fe3a93edb210 draft default tip
planemo upload for repository https://github.com/GReD-Clermont/sRNAPipe/ commit b10ab97380b0f2f5850138b9ddc03cd6afae1a9d
| author | brasset_jensen |
|---|---|
| date | Fri, 30 Sep 2022 14:46:12 +0000 |
| parents | 11708af40030 |
| children |
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BATUMI_I 0 119 0 BATUMI_I 119 144 252.016 BATUMI_I 144 7016 0 BATUMI_I 7016 7017 504.032 BATUMI_I 7017 7018 756.048 BATUMI_I 7018 7039 2520.16 BATUMI_I 7039 7040 1260.08 BATUMI_I 7040 7041 1008.06 BATUMI_I 7041 7963 0 BS2 0 68 0 BS2 68 93 504.032 BS2 93 186 0 BS2 186 194 252.016 BS2 194 195 504.032 BS2 195 214 756.048 BS2 214 221 504.032 BS2 221 235 252.016 BS2 235 284 0 BS2 284 285 252.016 BS2 285 308 504.032 BS2 308 335 0 BS2 335 338 252.016 BS2 338 360 756.048 BS2 360 362 504.032 BS2 362 440 0 BS2 440 456 252.016 BS2 456 463 1008.06 BS2 463 480 756.048 BS2 480 493 0 BS2 493 503 252.016 BS2 503 511 504.032 BS2 511 518 756.048 BS2 518 528 504.032 BS2 528 535 252.016 BS2 535 562 0 BS2 562 566 252.016 BS2 566 586 504.032 BS2 586 588 252.016 BS2 588 591 0 BS2 591 592 252.016 BS2 592 615 504.032 BS2 615 617 252.016 BS2 617 626 0 BS2 626 652 252.016 BS2 652 797 0 BS2 797 818 252.016 BS2 818 898 0 BS2 898 899 756.048 BS2 899 921 2520.16 BS2 921 923 2772.18 BS2 923 924 2520.16 BS2 924 926 504.032 BS2 926 941 252.016 BS2 941 1019 0 BS2 1019 1042 252.016 BS2 1042 1089 0 BS2 1089 1090 252.016 BS2 1090 1094 504.032 BS2 1094 1112 756.048 BS2 1112 1115 504.032 BS2 1115 1119 252.016 BS2 1119 1169 0 BS2 1169 1193 252.016 BS2 1193 1247 0 BS2 1247 1257 1008.06 BS2 1257 1272 1260.08 BS2 1272 1273 756.048 BS2 1273 1281 252.016 BS2 1281 1577 0 BS2 1577 1579 252.016 BS2 1579 1580 756.048 BS2 1580 1587 1008.06 BS2 1587 1598 1260.08 BS2 1598 1599 1008.06 BS2 1599 1602 756.048 BS2 1602 1603 504.032 BS2 1603 1607 252.016 BS2 1607 1622 0 BS2 1622 1628 252.016 BS2 1628 1646 504.032 BS2 1646 1653 252.016 BS2 1653 1886 0 BS2 1886 1907 252.016 BS2 1907 1913 0 BS2 1913 1915 252.016 BS2 1915 1936 1008.06 BS2 1936 1938 756.048 BS2 1938 1940 252.016 BS2 1940 1968 0 BS2 1968 1993 252.016 BS2 1993 2060 0 BS2 2060 2085 252.016 BS2 2085 2102 0 BS2 2102 2125 252.016 BS2 2125 2150 0 BS2 2150 2153 252.016 BS2 2153 2158 504.032 BS2 2158 2159 756.048 BS2 2159 2176 1008.06 BS2 2176 2178 756.048 BS2 2178 2179 504.032 BS2 2179 2180 252.016 BS2 2180 2184 0 BS2 2184 2206 1008.06 BS2 2206 2208 756.048 BS2 2208 2248 0 BS2 2248 2269 252.016 BS2 2269 2303 0 BS2 2303 2328 252.016 BS2 2328 2329 0 BS2 2329 2335 252.016 BS2 2335 2344 504.032 BS2 2344 2350 756.048 BS2 2350 2352 504.032 BS2 2352 2354 756.048 BS2 2354 2359 1008.06 BS2 2359 2367 756.048 BS2 2367 2376 504.032 BS2 2376 2380 252.016 BS2 2380 2558 0 BS2 2558 2559 1008.06 BS2 2559 2579 1512.1 BS2 2579 2581 1260.08 BS2 2581 2583 1008.06 BS2 2583 2584 504.032 BS2 2584 2590 252.016 BS2 2590 2609 504.032 BS2 2609 2615 252.016 BS2 2615 2664 0 BS2 2664 2673 504.032 BS2 2673 2689 756.048 BS2 2689 2696 252.016 BS2 2696 2706 0 BS2 2706 2731 504.032 BS2 2731 2756 0 BS2 2756 2761 252.016 BS2 2761 2783 504.032 BS2 2783 2786 252.016 BS2 2786 2795 0 BS2 2795 2819 504.032 BS2 2819 2851 0 BS2 2851 2870 252.016 BS2 2870 2875 1764.11 BS2 2875 2893 1512.1 BS2 2893 2894 1260.08 BS2 2894 2931 0 BS2 2931 2956 252.016 BS2 2956 2959 0 BS2 2959 2974 252.016 BS2 2974 2975 756.048 BS2 2975 2979 1008.06 BS2 2979 2984 1260.08 BS2 2984 2997 1008.06 BS2 2997 2999 504.032 BS2 2999 3003 252.016 BS2 3003 3041 0 BS2 3041 3065 756.048 BS2 3065 3078 0 BS2 3078 3105 252.016 BS2 3105 3116 0 BS2 3116 3141 252.016 BS2 3141 3167 0 BS2 3167 3187 252.016 BS2 3187 3201 0 BS2 3201 3227 252.016 BS2 3227 3345 0 BS2 3345 3362 252.016 BS2 3362 3370 504.032 BS2 3370 3385 252.016 BS2 3385 3429 0 BS2 3429 3453 756.048 BS2 3453 3454 252.016 BS2 3454 3908 0 BS2 3908 3930 504.032 BS2 3930 3931 252.016 BS2 3931 3991 0 BS2 3991 3992 252.016 BS2 3992 3994 504.032 BS2 3994 4010 756.048 BS2 4010 4015 504.032 BS2 4015 4020 252.016 BS2 4020 4110 0 BS2 4110 4132 252.016 BS2 4132 4138 0 BS2 4138 4162 252.016 BS2 4162 4224 0 BS2 4224 4244 252.016 BS2 4244 4246 504.032 BS2 4246 4265 252.016 BS2 4265 4278 0 BS2 4278 4303 252.016 BS2 4303 4348 0 BS2 4348 4374 252.016 BS2 4374 4415 0 BS2 4415 4420 1260.08 BS2 4420 4436 1512.1 BS2 4436 4437 1764.11 BS2 4437 4438 1512.1 BS2 4438 4440 1008.06 BS2 4440 4442 252.016 BS2 4442 4444 504.032 BS2 4444 4458 1008.06 BS2 4458 4461 756.048 BS2 4461 4463 1008.06 BS2 4463 4464 1512.1 BS2 4464 4466 1764.11 BS2 4466 4469 1512.1 BS2 4469 4483 1008.06 BS2 4483 4484 1260.08 BS2 4484 4487 1008.06 BS2 4487 4488 756.048 BS2 4488 4490 504.032 BS2 4490 4508 252.016 BS2 4508 4528 0 BS2 4528 4533 252.016 BS2 4533 4553 1008.06 BS2 4553 4554 756.048 BS2 4554 4555 504.032 BS2 4555 4557 252.016 BS2 4557 4638 0 BS2 4638 4663 252.016 BS2 4663 4668 0 BS2 4668 4690 756.048 BS2 4690 4692 504.032 BS2 4692 4693 252.016 BS2 4693 4721 0 DMCR1A 0 979 0 DMCR1A 979 1001 252.016 DMCR1A 1001 1161 0 DMCR1A 1161 1184 252.016 DMCR1A 1184 1336 0 DMCR1A 1336 1359 252.016 DMCR1A 1359 1420 0 DMCR1A 1420 1443 252.016 DMCR1A 1443 1582 0 DMCR1A 1582 1605 252.016 DMCR1A 1605 1859 0 DMCR1A 1859 1869 252.016 DMCR1A 1869 1880 504.032 DMCR1A 1880 1892 252.016 DMCR1A 1892 1966 0 DMCR1A 1966 1989 756.048 DMCR1A 1989 1990 252.016 DMCR1A 1990 2337 0 DMCR1A 2337 2339 252.016 DMCR1A 2339 2362 504.032 DMCR1A 2362 2363 252.016 DMCR1A 2363 4470 0 DMRT1B 0 437 0 DMRT1B 437 463 252.016 DMRT1B 463 552 0 DMRT1B 552 576 252.016 DMRT1B 576 631 0 DMRT1B 631 656 504.032 DMRT1B 656 1223 0 DMRT1B 1223 1228 504.032 DMRT1B 1228 1245 756.048 DMRT1B 1245 1247 504.032 DMRT1B 1247 1251 252.016 DMRT1B 1251 1354 0 DMRT1B 1354 1363 252.016 DMRT1B 1363 1366 504.032 DMRT1B 1366 1367 756.048 DMRT1B 1367 1368 1008.06 DMRT1B 1368 1369 1260.08 DMRT1B 1369 1370 2016.13 DMRT1B 1370 1373 2520.16 DMRT1B 1373 1379 3024.19 DMRT1B 1379 1384 2772.18 DMRT1B 1384 1388 2520.16 DMRT1B 1388 1390 2268.15 DMRT1B 1390 1393 2016.13 DMRT1B 1393 1394 1512.1 DMRT1B 1394 1395 756.048 DMRT1B 1395 1396 504.032 DMRT1B 1396 1397 252.016 DMRT1B 1397 1424 0 DMRT1B 1424 1446 252.016 DMRT1B 1446 5183 0 FW 0 280 0 FW 280 281 252.016 FW 281 289 756.048 FW 289 299 1008.06 FW 299 303 756.048 FW 303 305 504.032 FW 305 312 252.016 FW 312 382 0 FW 382 400 252.016 FW 400 406 504.032 FW 406 421 252.016 FW 421 428 0 FW 428 441 252.016 FW 441 465 504.032 FW 465 479 252.016 FW 479 500 0 FW 500 521 756.048 FW 521 546 0 FW 546 566 252.016 FW 566 569 504.032 FW 569 571 252.016 FW 571 573 504.032 FW 573 587 756.048 FW 587 591 504.032 FW 591 594 252.016 FW 594 630 0 FW 630 654 252.016 FW 654 672 0 FW 672 673 252.016 FW 673 683 504.032 FW 683 695 756.048 FW 695 698 504.032 FW 698 705 252.016 FW 705 724 0 FW 724 728 252.016 FW 728 748 504.032 FW 748 752 252.016 FW 752 761 0 FW 761 785 252.016 FW 785 820 0 FW 820 821 252.016 FW 821 823 3276.21 FW 823 828 3528.23 FW 828 844 3780.24 FW 844 845 3528.23 FW 845 846 504.032 FW 846 852 252.016 FW 852 901 0 FW 901 924 252.016 FW 924 983 0 FW 983 984 252.016 FW 984 1004 1260.08 FW 1004 1005 1512.1 FW 1005 1006 756.048 FW 1006 1026 252.016 FW 1026 1032 0 FW 1032 1054 3528.23 FW 1054 1055 2520.16 FW 1055 1056 2016.13 FW 1056 1057 1764.11 FW 1057 1058 756.048 FW 1058 1151 0 FW 1151 1170 756.048 FW 1170 1172 504.032 FW 1172 1176 252.016 FW 1176 1191 0 FW 1191 1214 252.016 FW 1214 1223 0 FW 1223 1245 504.032 FW 1245 1266 252.016 FW 1266 1292 0 FW 1292 1295 252.016 FW 1295 1302 756.048 FW 1302 1317 1008.06 FW 1317 1318 756.048 FW 1318 1321 504.032 FW 1321 1324 252.016 FW 1324 1325 504.032 FW 1325 1347 252.016 FW 1347 1384 0 FW 1384 1409 252.016 FW 1409 1423 0 FW 1423 1431 252.016 FW 1431 1444 504.032 FW 1444 1447 252.016 FW 1447 1455 504.032 FW 1455 1465 252.016 FW 1465 1476 0 FW 1476 1492 504.032 FW 1492 1499 1008.06 FW 1499 1516 504.032 FW 1516 1517 252.016 FW 1517 1613 0 FW 1613 1637 252.016 FW 1637 1727 0 FW 1727 1753 252.016 FW 1753 1776 0 FW 1776 1788 756.048 FW 1788 1794 1008.06 FW 1794 1797 756.048 FW 1797 1809 252.016 FW 1809 1825 0 FW 1825 1849 252.016 FW 1849 1938 0 FW 1938 1951 252.016 FW 1951 1957 504.032 FW 1957 1959 756.048 FW 1959 1975 504.032 FW 1975 1979 252.016 FW 1979 2023 0 FW 2023 2031 252.016 FW 2031 2044 504.032 FW 2044 2048 756.048 FW 2048 2052 504.032 FW 2052 2068 252.016 FW 2068 2096 0 FW 2096 2102 252.016 FW 2102 2121 504.032 FW 2121 2124 252.016 FW 2124 2139 0 FW 2139 2160 252.016 FW 2160 2247 0 FW 2247 2268 252.016 FW 2268 2297 0 FW 2297 2319 252.016 FW 2319 2396 0 FW 2396 2408 252.016 FW 2408 2409 756.048 FW 2409 2410 1260.08 FW 2410 2414 1512.1 FW 2414 2421 1764.11 FW 2421 2425 1512.1 FW 2425 2430 1764.11 FW 2430 2433 1512.1 FW 2433 2434 1008.06 FW 2434 2435 756.048 FW 2435 2446 252.016 FW 2446 2465 0 FW 2465 2467 252.016 FW 2467 2468 1008.06 FW 2468 2478 1260.08 FW 2478 2488 1512.1 FW 2488 2491 1260.08 FW 2491 2494 252.016 FW 2494 2495 1008.06 FW 2495 2503 1260.08 FW 2503 2509 1008.06 FW 2509 2516 1260.08 FW 2516 2517 252.016 FW 2517 2531 504.032 FW 2531 2540 252.016 FW 2540 2674 0 FW 2674 2684 252.016 FW 2684 2685 504.032 FW 2685 2689 756.048 FW 2689 2698 1008.06 FW 2698 2706 756.048 FW 2706 2708 504.032 FW 2708 2713 252.016 FW 2713 2762 0 FW 2762 2786 252.016 FW 2786 2790 0 FW 2790 2815 252.016 FW 2815 2854 0 FW 2854 2862 504.032 FW 2862 2865 1260.08 FW 2865 2869 1512.1 FW 2869 2878 1764.11 FW 2878 2883 1260.08 FW 2883 2887 1764.11 FW 2887 2888 1512.1 FW 2888 2890 1008.06 FW 2890 2893 756.048 FW 2893 2905 504.032 FW 2905 2906 756.048 FW 2906 2929 252.016 FW 2929 2934 0 FW 2934 2944 1008.06 FW 2944 2956 1260.08 FW 2956 2958 756.048 FW 2958 2964 252.016 FW 2964 2967 0 FW 2967 2971 252.016 FW 2971 2974 756.048 FW 2974 2989 1008.06 FW 2989 2992 756.048 FW 2992 2994 504.032 FW 2994 2995 252.016 FW 2995 3007 0 FW 3007 3023 252.016 FW 3023 3028 504.032 FW 3028 3031 252.016 FW 3031 3036 1008.06 FW 3036 3037 1260.08 FW 3037 3046 1512.1 FW 3046 3054 1260.08 FW 3054 3056 1008.06 FW 3056 3057 504.032 FW 3057 3059 252.016 FW 3059 3090 0 FW 3090 3092 252.016 FW 3092 3107 504.032 FW 3107 3115 756.048 FW 3115 3117 504.032 FW 3117 3127 252.016 FW 3127 3189 0 FW 3189 3212 1512.1 FW 3212 3213 504.032 FW 3213 3215 252.016 FW 3215 3217 0 FW 3217 3234 252.016 FW 3234 3239 504.032 FW 3239 3242 756.048 FW 3242 3243 1512.1 FW 3243 3246 1764.11 FW 3246 3258 2016.13 FW 3258 3262 1764.11 FW 3262 3264 1512.1 FW 3264 3269 252.016 FW 3269 3364 0 FW 3364 3366 504.032 FW 3366 3370 756.048 FW 3370 3384 1008.06 FW 3384 3389 1260.08 FW 3389 3390 756.048 FW 3390 3391 504.032 FW 3391 3403 252.016 FW 3403 3453 0 FW 3453 3471 252.016 FW 3471 3496 0 FW 3496 3504 252.016 FW 3504 3520 504.032 FW 3520 3525 756.048 FW 3525 3539 504.032 FW 3539 3545 756.048 FW 3545 3546 504.032 FW 3546 3547 756.048 FW 3547 3563 1008.06 FW 3563 3564 756.048 FW 3564 3569 504.032 FW 3569 3591 252.016 FW 3591 3617 0 FW 3617 3620 3528.23 FW 3620 3622 4032.26 FW 3622 3623 4284.27 FW 3623 3639 4536.29 FW 3639 3640 2520.16 FW 3640 3641 1260.08 FW 3641 3644 1008.06 FW 3644 3646 504.032 FW 3646 3648 252.016 FW 3648 3655 0 FW 3655 3680 252.016 FW 3680 3708 0 FW 3708 3730 252.016 FW 3730 3750 0 FW 3750 3754 504.032 FW 3754 3759 1260.08 FW 3759 3773 1512.1 FW 3773 3774 1260.08 FW 3774 3777 756.048 FW 3777 3779 504.032 FW 3779 3835 0 FW 3835 3859 252.016 FW 3859 3911 0 FW 3911 3912 252.016 FW 3912 3924 1260.08 FW 3924 3935 1764.11 FW 3935 3937 1260.08 FW 3937 3949 504.032 FW 3949 3994 0 FW 3994 4010 252.016 FW 4010 4014 2268.15 FW 4014 4015 2520.16 FW 4015 4024 2268.15 FW 4024 4031 2520.16 FW 4031 4032 2268.15 FW 4032 4033 2016.13 FW 4033 4034 1260.08 FW 4034 4035 756.048 FW 4035 4036 504.032 FW 4036 4038 252.016 FW 4038 4039 504.032 FW 4039 4041 756.048 FW 4041 4046 1008.06 FW 4046 4060 756.048 FW 4060 4065 504.032 FW 4065 4067 252.016 FW 4067 4086 0 FW 4086 4097 252.016 FW 4097 4103 504.032 FW 4103 4105 1260.08 FW 4105 4122 2016.13 FW 4122 4125 1764.11 FW 4125 4126 1512.1 FW 4126 4127 1260.08 FW 4127 4128 504.032 FW 4128 4162 0 FW 4162 4174 252.016 FW 4174 4181 504.032 FW 4181 4196 252.016 FW 4196 4242 0 FW 4242 4263 252.016 FW 4263 4319 0 FW 4319 4322 504.032 FW 4322 4323 3276.21 FW 4323 4328 3528.23 FW 4328 4342 3780.24 FW 4342 4343 3528.23 FW 4343 4345 2772.18 FW 4345 4346 2016.13 FW 4346 4348 1512.1 FW 4348 4351 1764.11 FW 4351 4353 2016.13 FW 4353 4355 1764.11 FW 4355 4370 2016.13 FW 4370 4372 1260.08 FW 4372 4373 756.048 FW 4373 4374 504.032 FW 4374 4376 252.016 FW 4376 4414 0 FW 4414 4437 252.016 FW 4437 4476 0 FW 4476 4499 252.016 FW 4499 4504 504.032 FW 4504 4505 1008.06 FW 4505 4506 1512.1 FW 4506 4507 2016.13 FW 4507 4521 2268.15 FW 4521 4525 2016.13 FW 4525 4528 1764.11 FW 4528 4529 1008.06 FW 4529 4530 1260.08 FW 4530 4533 1008.06 FW 4533 4553 504.032 FW 4553 4574 252.016 FW 4574 4692 0 G6_DM 0 1185 0 G6_DM 1185 1189 252.016 G6_DM 1189 1195 504.032 G6_DM 1195 1209 756.048 G6_DM 1209 1213 504.032 G6_DM 1213 1218 252.016 G6_DM 1218 1219 504.032 G6_DM 1219 1241 252.016 G6_DM 1241 1334 0 G6_DM 1334 1335 2772.18 G6_DM 1335 1357 3024.19 G6_DM 1357 1358 1260.08 G6_DM 1358 1359 1008.06 G6_DM 1359 1360 252.016 G6_DM 1360 1383 0 G6_DM 1383 1385 2016.13 G6_DM 1385 1398 2772.18 G6_DM 1398 1400 3528.23 G6_DM 1400 1407 3780.24 G6_DM 1407 1408 3528.23 G6_DM 1408 1409 2016.13 G6_DM 1409 1410 1764.11 G6_DM 1410 1422 1008.06 G6_DM 1422 1424 504.032 G6_DM 1424 1445 252.016 G6_DM 1445 1473 0 G6_DM 1473 1491 252.016 G6_DM 1491 1492 504.032 G6_DM 1492 1498 756.048 G6_DM 1498 1517 504.032 G6_DM 1517 1530 0 G6_DM 1530 1531 252.016 G6_DM 1531 1533 504.032 G6_DM 1533 1552 1512.1 G6_DM 1552 1554 1008.06 G6_DM 1554 1556 504.032 G6_DM 1556 1619 0 G6_DM 1619 1629 252.016 G6_DM 1629 1645 504.032 G6_DM 1645 1663 252.016 G6_DM 1663 1665 504.032 G6_DM 1665 1673 756.048 G6_DM 1673 1680 504.032 G6_DM 1680 1686 756.048 G6_DM 1686 1688 504.032 G6_DM 1688 1699 252.016 G6_DM 1699 1702 504.032 G6_DM 1702 1704 1512.1 G6_DM 1704 1723 1260.08 G6_DM 1723 1725 756.048 G6_DM 1725 1727 252.016 G6_DM 1727 1892 0 G6_DM 1892 1916 252.016 G6_DM 1916 2042 0 Gypsy2-LTR_DM 0 58 0 Gypsy2-LTR_DM 58 85 252.016 Gypsy2-LTR_DM 85 157 0 Gypsy2-LTR_DM 157 182 252.016 Gypsy2-LTR_DM 182 258 0 Gypsy2-LTR_DM 258 265 252.016 Gypsy2-LTR_DM 265 266 756.048 Gypsy2-LTR_DM 266 279 1008.06 Gypsy2-LTR_DM 279 289 756.048 Gypsy2-LTR_DM 289 290 504.032 Gypsy2-LTR_DM 290 338 0 I_DM 0 1619 0 I_DM 1619 1641 252.016 I_DM 1641 3237 0 I_DM 3237 3262 252.016 I_DM 3262 4912 0 I_DM 4912 4939 252.016 I_DM 4939 5374 0 MAX_I 0 238 0 MAX_I 238 263 252.016 MAX_I 263 4085 0 MAX_I 4085 4103 252.016 MAX_I 4103 7914 0 MAX_LTR 0 23 0 MAX_LTR 23 45 252.016 MAX_LTR 45 48 0 MAX_LTR 48 72 252.016 MAX_LTR 72 80 0 MAX_LTR 80 84 504.032 MAX_LTR 84 105 756.048 MAX_LTR 105 138 0 MAX_LTR 138 161 252.016 MAX_LTR 161 321 0 PROTOP 0 209 0 PROTOP 209 224 504.032 PROTOP 224 234 756.048 PROTOP 234 250 252.016 PROTOP 250 2442 0 PROTOP 2442 2465 252.016 PROTOP 2465 2653 0 PROTOP 2653 2678 252.016 PROTOP 2678 4360 0 PROTOP 4360 4384 252.016 PROTOP 4384 4387 0 PROTOP 4387 4412 252.016 PROTOP 4412 4480 0