Mercurial > repos > brasset_jensen > srnapipe
view test-data/res_files/reads-sample-small.fastq/subgroups/bonafide_reads/bonafide_reads-TEs_reads_counts.txt @ 74:fe3a93edb210 draft default tip
planemo upload for repository https://github.com/GReD-Clermont/sRNAPipe/ commit b10ab97380b0f2f5850138b9ddc03cd6afae1a9d
| author | brasset_jensen |
|---|---|
| date | Fri, 30 Sep 2022 14:46:12 +0000 |
| parents | 11708af40030 |
| children |
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ID reads counts RPKM per million of piRNAs per million of miRNAs per million of bonafide reads sense reads counts reverse reads counts % of sense 1U % of sense 10A % of reverse 1U % of reverse 10A BATUMI_I 32 1012.75 13698.63 3555555.56 10389.61 11 21 90.9090909090909 63.6363636363636 61.9047619047619 14.2857142857143 BATUMI_LTR 8 7412.24 3424.66 888888.89 2597.40 0 8 0 0 0 0 BS2 757 40410.13 324058.22 84111111.11 245779.22 151 606 43.7086092715232 42.3841059602649 14.5214521452145 32.013201320132 COPIA_DM_I 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0 COPIA_DM_LTR 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0 DMCR1A 52 2931.73 22260.27 5777777.78 16883.12 12 40 50 58.3333333333333 20 45 DMRT1B 39 1896.32 16695.21 4333333.33 12662.34 20 19 30 35 0 15.7894736842105 FW 1510 81104.93 646404.11 167777777.78 490259.74 279 1231 38.7096774193548 63.0824372759857 14.9471974004874 27.4573517465475 G6_DM 204 25176.93 87328.77 22666666.67 66233.77 53 151 62.2641509433962 54.7169811320755 1.98675496688742 33.112582781457 Gypsy2-I_DM 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0 Gypsy2-LTR_DM 22 16403.42 9417.81 2444444.44 7142.86 6 16 66.6666666666667 66.6666666666667 0 6.25 I_DM 5 234.48 2140.41 555555.56 1623.38 3 2 66.6666666666667 66.6666666666667 0 0 MAX_I 13 413.98 5565.07 1444444.44 4220.78 2 11 0 0 72.7272727272727 0 MAX_LTR 16 12561.55 6849.32 1777777.78 5194.81 6 10 16.6666666666667 16.6666666666667 10 20 PROTOP 20 1125.07 8561.64 2222222.22 6493.51 7 13 57.1428571428571 57.1428571428571 7.69230769230769 23.0769230769231 ZAM_I 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0 ZAM_LTR 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0