Mercurial > repos > brasset_jensen > srnapipe
view test-data/res_files/reads-sample-small.fastq/subgroups/bonafide_reads/bonafide_reads-TEs_reads_counts_mismatches.txt @ 74:fe3a93edb210 draft default tip
planemo upload for repository https://github.com/GReD-Clermont/sRNAPipe/ commit b10ab97380b0f2f5850138b9ddc03cd6afae1a9d
| author | brasset_jensen |
|---|---|
| date | Fri, 30 Sep 2022 14:46:12 +0000 |
| parents | 11708af40030 |
| children |
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ID reads counts RPKM per million of piRNAs per million of miRNAs per million of bonafide reads sense reads counts reverse reads counts % of sense 1U % of sense 10A % of reverse 1U % of reverse 10A BATUMI_I 21 664.62 8989.73 2333333.33 6818.18 10 11 100 70 63.6363636363636 9.09090909090909 BATUMI_LTR 8 7412.24 3424.66 888888.89 2597.40 0 8 0 0 0 0 BS2 25 1334.55 10702.05 2777777.78 8116.88 5 20 60 40 15 30 COPIA_DM_I 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0 COPIA_DM_LTR 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0 DMCR1A 7 394.66 2996.58 777777.78 2272.73 1 6 100 100 33.3333333333333 0 DMRT1B 23 1118.34 9845.89 2555555.56 7467.53 11 12 27.2727272727273 45.4545454545455 0 25 FW 8 429.70 3424.66 888888.89 2597.40 5 3 80 100 0 66.6666666666667 G6_DM 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0 Gypsy2-I_DM 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0 Gypsy2-LTR_DM 1 745.61 428.08 111111.11 324.68 0 1 0 0 0 0 I_DM 3 140.69 1284.25 333333.33 974.03 1 2 0 100 0 0 MAX_I 3 95.53 1284.25 333333.33 974.03 2 1 0 0 0 0 MAX_LTR 5 3925.48 2140.41 555555.56 1623.38 1 4 0 100 25 0 PROTOP 13 731.30 5565.07 1444444.44 4220.78 6 7 50 50 0 14.2857142857143 ZAM_I 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0 ZAM_LTR 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0