Mercurial > repos > brasset_jensen > srnapipe
view test-data/res_files/reads-sample-small.fastq/subgroups/piRNAs/piRNAs-TEs_reads_counts.txt @ 74:fe3a93edb210 draft default tip
planemo upload for repository https://github.com/GReD-Clermont/sRNAPipe/ commit b10ab97380b0f2f5850138b9ddc03cd6afae1a9d
| author | brasset_jensen |
|---|---|
| date | Fri, 30 Sep 2022 14:46:12 +0000 |
| parents | 11708af40030 |
| children |
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ID reads counts RPKM per million of piRNAs per million of miRNAs per million of bonafide reads sense reads counts reverse reads counts % of sense 1U % of sense 10A % of reverse 1U % of reverse 10A BATUMI_I 25 791.21 10702.05 2777777.78 8116.88 11 14 90.9090909090909 63.6363636363636 64.2857142857143 7.14285714285714 BATUMI_LTR 8 7412.24 3424.66 888888.89 2597.40 0 8 0 0 0 0 BS2 625 33363.71 267551.37 69444444.44 202922.08 124 501 48.3870967741936 43.5483870967742 16.3672654690619 32.7345309381238 COPIA_DM_I 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0 COPIA_DM_LTR 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0 DMCR1A 49 2762.59 20976.03 5444444.44 15909.09 10 39 50 70 20.5128205128205 46.1538461538462 DMRT1B 31 1507.33 13270.55 3444444.44 10064.94 16 15 31.25 31.25 0 13.3333333333333 FW 1077 57847.69 461044.52 119666666.67 349675.32 184 893 40.2173913043478 66.304347826087 16.6853303471445 31.2430011198208 G6_DM 163 20116.86 69777.40 18111111.11 52922.08 43 120 72.0930232558139 51.1627906976744 1.66666666666667 33.3333333333333 Gypsy2-I_DM 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0 Gypsy2-LTR_DM 17 12675.37 7277.40 1888888.89 5519.48 5 12 60 60 0 0 I_DM 3 140.69 1284.25 333333.33 974.03 2 1 100 50 0 0 MAX_I 11 350.29 4708.90 1222222.22 3571.43 1 10 0 0 70 0 MAX_LTR 9 7065.87 3852.74 1000000.00 2922.08 4 5 25 25 0 40 PROTOP 20 1125.07 8561.64 2222222.22 6493.51 7 13 57.1428571428571 57.1428571428571 7.69230769230769 23.0769230769231 ZAM_I 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0 ZAM_LTR 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0