Mercurial > repos > brasset_jensen > srnapipe
view test-data/res_files/reads-sample-small.fastq/subgroups/piRNAs/piRNAs-TEs_reads_counts_nomismatches.txt @ 74:fe3a93edb210 draft default tip
planemo upload for repository https://github.com/GReD-Clermont/sRNAPipe/ commit b10ab97380b0f2f5850138b9ddc03cd6afae1a9d
| author | brasset_jensen |
|---|---|
| date | Fri, 30 Sep 2022 14:46:12 +0000 |
| parents | 11708af40030 |
| children |
line wrap: on
line source
ID reads counts RPKM per million of piRNAs per million of miRNAs per million of bonafide reads sense reads counts reverse reads counts % of sense 1U % of sense 10A % of reverse 1U % of reverse 10A BATUMI_I 8 253.19 3424.66 888888.89 2597.40 1 7 0 0 57.1428571428571 14.2857142857143 BATUMI_LTR 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0 BS2 602 32135.93 257705.48 66888888.89 195454.55 119 483 47.8991596638655 43.6974789915966 16.3561076604555 32.712215320911 COPIA_DM_I 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0 COPIA_DM_LTR 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0 DMCR1A 43 2424.32 18407.53 4777777.78 13961.04 9 34 44.4444444444444 66.6666666666667 17.6470588235294 52.9411764705882 DMRT1B 13 632.11 5565.07 1444444.44 4220.78 7 6 28.5714285714286 14.2857142857143 0 0 FW 1070 57471.71 458047.95 118888888.89 347402.60 180 890 39.4444444444444 65.5555555555556 16.7415730337079 31.123595505618 G6_DM 163 20116.86 69777.40 18111111.11 52922.08 43 120 72.0930232558139 51.1627906976744 1.66666666666667 33.3333333333333 Gypsy2-I_DM 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0 Gypsy2-LTR_DM 16 11929.76 6849.32 1777777.78 5194.81 5 11 60 60 0 0 I_DM 2 93.79 856.16 222222.22 649.35 2 0 100 50 0 0 MAX_I 9 286.60 3852.74 1000000.00 2922.08 0 9 0 0 77.7777777777778 0 MAX_LTR 6 4710.58 2568.49 666666.67 1948.05 3 3 33.3333333333333 0 0 66.6666666666667 PROTOP 7 393.78 2996.58 777777.78 2272.73 1 6 100 100 16.6666666666667 33.3333333333333 ZAM_I 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0 ZAM_LTR 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0