Mercurial > repos > brenninc > xdirectory_reader_limited_by_data_table
comparison README @ 0:ccabef3f7d5f draft
Uploaded first version
| author | brenninc |
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| date | Sun, 08 May 2016 11:01:03 -0400 |
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| -1:000000000000 | 0:ccabef3f7d5f |
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| 1 This tool will lookup files on the Galaxy server machine, including mounted directories. | |
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| 3 The user aspects of the tool are explained in the help section of data_reader.xml | |
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| 5 Only directories that are included in the white list and not in the black list are allowed. | |
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| 7 The white and black lists can be changed without the requirement to restart the server as these are read from the tools install directory each time the tool is run. | |
| 8 | |
| 9 ==== | |
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| 11 The white list is tool-data/white-list.ini | |
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| 13 Any directory that starts with any entry from this file will be considered to have passed. | |
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| 15 The default file includes a single / so all absolute paths will pass. | |
| 16 | |
| 17 ==== | |
| 18 | |
| 19 The black list is tool-data/black-list.ini | |
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| 21 Any directory that contains any of the blacklisted strings anywhere in the path are excluded. | |
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| 23 The default file excludes most of the standard linux systems directories where data is unlikely to be found. | |
| 24 | |
| 25 It also excludes the /galaxy/ pattern to avoid users getting access to galaxy files. | |
| 26 | |
| 27 Also .. and ~ are excluded for security reasons. | |
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