Mercurial > repos > brigidar > select_product
comparison select_product.xml @ 7:7d71f20d949e draft
Uploaded
author | brigidar |
---|---|
date | Fri, 09 Oct 2015 11:52:18 -0400 |
parents | 8eb1751dcfe7 |
children |
comparison
equal
deleted
inserted
replaced
6:8eb1751dcfe7 | 7:7d71f20d949e |
---|---|
1 <tool id="select_product" name="select_product" version="0.4"> | 1 <tool id="select_product" name="select_product" version="0.6"> |
2 <description>define product names to sort on and flanking region</description> | 2 <description>define product names to sort on and flanking region</description> |
3 <requirements> | 3 <requirements> </requirements> |
4 | 4 <stdio> |
5 </requirements> | 5 <exit_code range="1:" /> |
6 </stdio> | |
7 | |
6 <command interpreter="python"> | 8 <command interpreter="python"> |
7 select_product.py | 9 select_product.py -g $input_file -n $number -k $keys_1 -o $output_file |
8 -g $input_file | |
9 -n $number | |
10 -k $keys | |
11 > output_file | |
12 </command> | 10 </command> |
13 | 11 |
14 <inputs> | 12 <inputs> |
15 <param format="genbank" name="input_file" type="data" label="reference genbank file"/> | 13 <param format="genbank" name="input_file" type="data" label="reference genbank file"/> |
16 <param name="number" type="integer" value="50" label="flanking region"/> | 14 <param name="number" type="integer" value="50" label="flanking region"/> |
17 <param name="keys" type="text" label=" list of keys separated by comma of product names"/> | 15 <param name="keys_1" type="text" value="transposase" label="list of keys separated by comma of product names"/> |
18 </inputs> | 16 </inputs> |
19 | 17 |
20 | 18 |
21 <outputs> | 19 <outputs> |
22 <data format="tabular" name="output_file" from_work_dir="output_file"> | 20 <data format="tabular" name="output_file"> |
23 </data> | 21 </data> |
24 | 22 |
25 | 23 |
26 </outputs> | 24 </outputs> |
27 | 25 |