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comparison data_managers/data_manager_rgi_build_db/data_manager/rgi_database_builder.xml @ 2:a671367c326e draft

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"planemo upload for repository https://github.com/arpcard/rgi commit 481838067117d0c8ae84bc92ee58f47cfc18aa5f"
author card
date Tue, 17 Nov 2020 00:23:36 +0000
parents f96cbb663aa9
children bfbfc24c5af2
comparison
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1:f96cbb663aa9 2:a671367c326e
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool id="rgi_database_builder" name="RGI Database Builder" tool_type="manage_data" version="1.0.0"> 2 <tool id="rgi_database_builder" name="RGI Database Builder" tool_type="manage_data" version="1.1.0">
3 <description>Download and build the CARD database for RGI</description> 3 <description>Download and build the CARD database for RGI</description>
4 <requirements> 4 <requirements>
5 <requirement type="package" version="5.1.0">rgi</requirement> 5 <requirement type="package" version="5.1.1">rgi</requirement>
6 </requirements> 6 </requirements>
7 <stdio> 7 <stdio>
8 <exit_code description="Error" level="fatal" range="1:" /> 8 <exit_code description="Error" level="fatal" range="1:" />
9 </stdio> 9 </stdio>
10 <command interpreter="python3"> 10 <command>
11 <![CDATA[ 11 <![CDATA[
12 rgi_database_builder.py --out "${out_file}" 12 python3 rgi_database_builder.py --out "${out_file}"
13 #if $name: 13 #if $name:
14 --name "${name}" 14 --name "${name}"
15 #end if 15 #end if
16 #if $url: 16 #if $url:
17 --url "${url}" 17 --url "${url}"