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view data_managers/data_manager_conf.xml @ 5:84bd24ac33fd draft default tip
planemo upload for repository https://github.com/arpcard/rgi commit a87febbe1a31eb5b9918b18bc04097fe47766e71
author | card |
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date | Wed, 07 Sep 2022 13:05:05 +0000 |
parents | ce852ee2c394 |
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<?xml version="1.0"?> <data_managers> <data_manager tool_file="data_manager_rgi_build_db/data_manager/rgi_database_builder.xml" id="rgi_database_builder" version="1.2.0"> <!-- Defines a Data Table to be modified --> <data_table name="rgi_databases"> <!-- Handle the output of the Data Manager Tool --> <output> <!-- Columns that will be specified by the Data Manager Tool --> <column name="value" /> <column name="name" /> <!-- The value of this column will be modified based upon data in "out_file" --> <column name="path" output_ref="out_file" > <!-- Moving a file from the extra files path of "out_file" --> <move type="directory" relativize_symlinks="True"> <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">rgi_databases/${value}/${path}</target> </move> <!-- Store this value in the final Data Table --> <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/rgi_databases/${value}/${path}</value_translation> <value_translation type="function">abspath</value_translation> </column> </output> </data_table> </data_manager> </data_managers>