annotate data_manager_build_alfa_indexes/data_manager_conf.xml @ 26:66e35b650256 draft

Uploaded
author charles-bernard
date Wed, 16 Nov 2016 12:37:49 -0500
parents 016200d4e379
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
016200d4e379 Uploaded
charles-bernard
parents:
diff changeset
1 <?xml version="1.0"?>
016200d4e379 Uploaded
charles-bernard
parents:
diff changeset
2 <data_managers>
016200d4e379 Uploaded
charles-bernard
parents:
diff changeset
3 <data_manager tool_file="data_manager/data_manager_build_alfa_indexes.xml" id="build_alfa_indexes">
016200d4e379 Uploaded
charles-bernard
parents:
diff changeset
4 <data_table name="alfa_indexes">
016200d4e379 Uploaded
charles-bernard
parents:
diff changeset
5 <output>
016200d4e379 Uploaded
charles-bernard
parents:
diff changeset
6 <column name="species" />
016200d4e379 Uploaded
charles-bernard
parents:
diff changeset
7 <column name="version" />
016200d4e379 Uploaded
charles-bernard
parents:
diff changeset
8 <column name="release" />
016200d4e379 Uploaded
charles-bernard
parents:
diff changeset
9 <column name="value" />
016200d4e379 Uploaded
charles-bernard
parents:
diff changeset
10 <column name="dbkey" />
016200d4e379 Uploaded
charles-bernard
parents:
diff changeset
11 <column name="name" />
016200d4e379 Uploaded
charles-bernard
parents:
diff changeset
12 <column name="prefix" output_ref="out_file">
016200d4e379 Uploaded
charles-bernard
parents:
diff changeset
13 <move type="directory">
016200d4e379 Uploaded
charles-bernard
parents:
diff changeset
14 <!-- <source>{prefix}</source> - out_file.extra_files_path is used as base by default -->
016200d4e379 Uploaded
charles-bernard
parents:
diff changeset
15 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">alfa_indexes/${dbkey}</target>
016200d4e379 Uploaded
charles-bernard
parents:
diff changeset
16 </move>
26
66e35b650256 Uploaded
charles-bernard
parents: 0
diff changeset
17 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/alfa_indexes/${dbkey}/${species}.${version}.${release}</value_translation>
0
016200d4e379 Uploaded
charles-bernard
parents:
diff changeset
18 <value_translation type="function">abspath</value_translation>
016200d4e379 Uploaded
charles-bernard
parents:
diff changeset
19 </column>
016200d4e379 Uploaded
charles-bernard
parents:
diff changeset
20 </output>
016200d4e379 Uploaded
charles-bernard
parents:
diff changeset
21 </data_table>
016200d4e379 Uploaded
charles-bernard
parents:
diff changeset
22 </data_manager>
26
66e35b650256 Uploaded
charles-bernard
parents: 0
diff changeset
23 </data_managers>