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1 __license__ = "MIT"
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2
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3 import unittest
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4 import linkKEGG as lk
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5
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6
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7 class SimpleUnitTest(unittest.TestCase):
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8 def setUp(self):
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9 import os
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10
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11 os.environ["http_proxy"] = "" # work around for IOError: [Errno url error] invalid proxy for http:
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12 pass
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13
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14 def tearDown(self):
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15 pass
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16
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17 def test_no_db_specified(self):
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18 """should return default glycan path example"""
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19 m = lk.linked_entries_from_kegg()
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20 self.assertIn("path", m)
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21 self.assertIn("G00001", m)
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22
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23
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24 def test_bad_db(self):
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25 """"""
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26 import urllib2
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27
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28 with self.assertRaises(urllib2.HTTPError):
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29 m = lk.linked_entries_from_kegg("john", "sally")
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30
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31 def test_bad_dbentry(self):
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32 """"""
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33 import urllib2
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34
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35 with self.assertRaises(urllib2.HTTPError):
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36 m = lk.linked_entries_from_kegg("ko", "map000")
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37
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38 def test_no_links_btn_dbs(self):
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39 """ should return an empty string, cannot write None to file"""
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40 m = lk.linked_entries_from_kegg("br", "gl:G10496")
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41 self.assertEquals(m,"")
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42
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