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annotate get_data/kegg_glycan/test-data/shiga-toxin-example-OR-broken @ 1:0a5e0df17054 draft default tip

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author chrisb
date Fri, 06 May 2016 08:05:48 -0400
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1
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
1 ece:Z1464 stx2A; shiga-like toxin II A subunit encoded by bacteriophage BP-933W; K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
2 ece:Z1465 stx2B; shiga-like toxin II B subunit encoded by bacteriophage BP-933W; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
3 ece:Z3343 stx1B; shiga-like toxin 1 subunit B encoded within prophage CP-933V; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
4 ece:Z3344 stx1A; shiga-like toxin 1 subunit A encoded within prophage CP-933V; K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
5 ecs:ECs1205 Shiga toxin 2 subunit A; K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
6 ecs:ECs1206 Shiga toxin 2 subunit B; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
7 ecs:ECs2973 Shiga toxin I subunit B; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
8 ecs:ECs2974 Shiga toxin I subunit A; K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
parents:
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9 ecf:ECH74115_2905 shigatoxin 2, subunit B; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
parents:
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10 ecf:ECH74115_2906 shiga toxin subunit A; K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
11 ecf:ECH74115_3532 shiga toxin 2 B subunit; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
12 ecf:ECH74115_3533 shiga toxin subunit A; K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
13 etw:ECSP_2722 stx2cB; Shiga-like toxin II subunit B precursor; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
14 etw:ECSP_2723 stx2A1; Shiga-like toxin II subunit A precursor; K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
15 etw:ECSP_3252 stx2B; shiga toxin II subunit B; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
16 etw:ECSP_3253 stx2A2; shiga toxin II subunit A; K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
17 elx:CDCO157_1154 Shiga toxin 2 subunit A; K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
parents:
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18 elx:CDCO157_1155 Shiga toxin 2 subunit B; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
19 elx:CDCO157_2738 Shiga toxin I subunit B precursor; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
parents:
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20 elx:CDCO157_2739 Shiga toxin I subunit A precursor; K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
21 eoj:ECO26_1599 Shiga toxin 1 subunit A; K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
22 eoj:ECO26_1600 Shiga toxin 1 subunit B; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
parents:
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23 eoi:ECO111_2429 Shiga toxin 2 subunit B; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
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24 eoi:ECO111_2430 Shiga toxin 2 subunit A; K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
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25 eoi:ECO111_3361 Shiga toxin 1 subunit A; K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
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26 eoi:ECO111_3362 Shiga toxin 1 subunit B; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
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diff changeset
27 eoh:ECO103_2844 Shiga toxin 2 subunit B; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
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diff changeset
28 eoh:ECO103_2845 Shiga toxin 2 subunit A; K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
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diff changeset
29 eoh:ECO103_5197 Shiga toxin 1 subunit A; K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
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30 eoh:ECO103_5198 Shiga toxin 1 subunit B; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
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31 eso:O3O_09170 Shiga toxin 2 subunit B; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
parents:
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32 eso:O3O_09165 Shiga toxin 2 subunit A; K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
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diff changeset
33 esm:O3M_16105 Shiga toxin 2 subunit B; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
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diff changeset
34 esm:O3M_16110 Shiga toxin 2 subunit A; K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
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35 esl:O3K_16130 Shiga toxin 2 subunit B; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
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diff changeset
36 esl:O3K_16135 Shiga toxin 2 subunit A; K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
37 ecoo:ECRM13514_3144 stx2B; Shiga-like toxin II subunit B precursor; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
parents:
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38 ecoo:ECRM13514_3145 stx2A; Shiga-like toxin II subunit A precursor (EC:3.2.2.22); K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
39 ecoh:ECRM13516_2315 stx2B; Shiga-like toxin II subunit B precursor; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
40 ecoh:ECRM13516_2316 stx2A; Shiga-like toxin II subunit A precursor (EC:3.2.2.22); K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
parents:
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41 stm:STM0284 shiga-like toxin A subunit
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
42 seo:STM14_0332 putative Shiga-like toxin A subunit
0a5e0df17054 Uploaded
chrisb
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43 sev:STMMW_02891 putative shiga-like toxin A subunit
0a5e0df17054 Uploaded
chrisb
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44 sem:STMDT12_C02790 putative Shiga-like toxin A subunit
0a5e0df17054 Uploaded
chrisb
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diff changeset
45 sej:STMUK_0287 putative Shiga-like toxin A subunit
0a5e0df17054 Uploaded
chrisb
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46 setu:STU288_13325 putative shiga-like toxin A subunit
0a5e0df17054 Uploaded
chrisb
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47 setc:CFSAN001921_15985 Shiga toxin A subunit
0a5e0df17054 Uploaded
chrisb
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48 send:DT104_02831 sciR; shiga-like toxin a subunit, type VI secretion system SciR protein flags: precursor
0a5e0df17054 Uploaded
chrisb
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49 seni:CY43_01420 Shiga toxin A subunit
0a5e0df17054 Uploaded
chrisb
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diff changeset
50 seen:SE451236_07435 Shiga toxin A subunit
0a5e0df17054 Uploaded
chrisb
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51 spt:SPA2480 putative shiga-like toxin A subunit
0a5e0df17054 Uploaded
chrisb
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diff changeset
52 sek:SSPA2315 shiga-like toxin A subunit
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
53 sei:SPC_0292 putative shiga-like toxin A subunit
0a5e0df17054 Uploaded
chrisb
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54 sec:SCH_0277 putative shiga-like toxin A subunit
0a5e0df17054 Uploaded
chrisb
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diff changeset
55 shb:SU5_0926 SciR Shiga-like toxin A subunit
0a5e0df17054 Uploaded
chrisb
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diff changeset
56 senh:CFSAN002069_07720 Shiga toxin A subunit
0a5e0df17054 Uploaded
chrisb
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diff changeset
57 seeh:SEEH1578_10515 putative shiga-like toxin A subunit
0a5e0df17054 Uploaded
chrisb
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diff changeset
58 seec:CFSAN002050_07960 Shiga toxin A subunit
0a5e0df17054 Uploaded
chrisb
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diff changeset
59 sene:IA1_01505 Shiga toxin A subunit
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
60 senc:SEET0819_08350 Shiga toxin A subunit
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
61 sdy:SDY_1389 stxA; Shiga toxin subunit A; K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
62 sdy:SDY_1390 stxB; Shiga toxin subunit B; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
63 sdz:Asd1617_01826 Shiga toxin subunit A (EC:3.2.2.22); K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
64 ebi:EbC_13780 Putative shiga-like toxin A subunit
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
65 psos:POS17_2009 P9; putative Shiga-like toxin alpha subunit
0a5e0df17054 Uploaded
chrisb
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diff changeset
66 ssab:SSABA_v1c03870 hypothetical protein; K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
67 ssab:SSABA_v1c09020 hypothetical protein; K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
68 calt:Cal6303_2132 ribosome-inactivating protein; K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
69 vg:22277199 PI30_gp34; Shigella phage POCJ13; shiga toxin A-chain precursor (EC:3.2.2.22); K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
70 vg:22277200 PI30_gp35; Shigella phage POCJ13; shiga toxin I subunit B precursor; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
parents:
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71 vg:1262301 APSE-1_07; Endosymbiont phage APSE-1; P7; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
72 vg:1481747 stx1A, Stx1_p142; Escherichia Stx1 converting phage; Shiga toxin1 subunit A; K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
73 vg:1481748 stx1B, Stx1_p143; Escherichia Stx1 converting phage; Shiga toxin1 subunit B; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
74 vg:1481767 stx2A, Stx2II_p143; Stx2 converting phage II; Shiga toxin2 subunit A; K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
75 vg:1481768 stx2B, Stx2II_p144; Stx2 converting phage II; Shiga toxin2 subunit B; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
76 vg:26228052 AS349_gp84; Escherichia phage PA2; shiga-like toxin II subunit A precursor (EC:3.2.2.22); K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
77 vg:26228100 AS349_gp83; Escherichia phage PA2; shiga-like toxin II subunit B precursor; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
78 vg:26516496 stx2A, AU085_gp42; Enterobacteria phage VT2phi_272; Shiga toxin 2 A subunit; K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
79 vg:26516448 stx2B, AU085_gp41; Enterobacteria phage VT2phi_272; Shiga toxin 2 B subunit; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
80 vg:26516283 stxB, phi191_00011, AU083_gp11; Escherichia phage phi191; shiga toxin subunit B precursor; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
81 vg:26516284 stxA, phi191_00012, AU083_gp12; Escherichia phage phi191; shiga toxin subunit A precursor (EC:3.2.2.22); K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
82 vg:26519429 AU154_gp39; Shigella phage Ss-VASD; Stx1 A subunit; K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
83 vg:26519430 AU154_gp40; Shigella phage Ss-VASD; Stx1 B subunit; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
84 vg:1261950 stxA2, L0103, sltIIA, stx2A, 933Wp40; Enterobacteria phage 933W; Shiga toxin 2 subunit A; K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
85 vg:1262010 stxB2, L0104, sltIIB, stx2B, 933Wp41; Enterobacteria phage 933W; Shiga toxin 2 subunit B; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
86 vg:2641645 stxA1, phi4795p38, PBV4795_ORF40; Enterobacteria phage BP-4795; Shiga toxin 1 subunit A; K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
87 vg:2641657 stxB1, phi4795p39, PBV4795_ORF41; Enterobacteria phage BP-4795; Shiga toxin 1 subunit B; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
88 vg:929695 stxA2e, P27p25; Enterobacteria phage phiP27; shiga toxin 2e A-subunit; K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
89 vg:929727 stxB2e, P27p26; Enterobacteria phage phiP27; shiga toxin 2e B-subunit; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
90 vg:4397483 stx2A, Stx2-86_gp01; Stx2-converting phage 86; shiga toxin 2 subunit A; K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
91 vg:4397484 stx2B, Stx2-86_gp02; Stx2-converting phage 86; shiga toxin 2 subunit B; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
92 vg:6159405 stx2A, pMIN27_41; Enterobacteria phage Min27; ORF44; K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
93 vg:6159351 stx2B, pMIN27_42; Enterobacteria phage Min27; ORF45; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
94 vg:6973138 Stx2-1717_gp41; Stx2-converting phage 1717; verocytotoxin 2 variant 2c subunit A; K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
95 vg:6972909 stx2cB, Stx2-1717_gp42; Stx2-converting phage 1717; verocytotoxin 2 variant 2c subunit B; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
96 vg:6973079 YYZ_gp39; Enterobacteria phage YYZ-2008; Shiga toxin 1 subunit A; K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
97 vg:6973080 YYZ_gp40; Enterobacteria phage YYZ-2008; Shiga toxin 1 subunit B; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
98 vg:13828571 stx2A, D300_gp43; Escherichia phage P13374; shiga toxin 2 subunit A; K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
99 vg:13828535 stx2B, D300_gp42; Escherichia phage P13374; shiga toxin 2 subunit B; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
100 vg:14005228 F366_gp36; Escherichia phage TL-2011c; Shiga toxin 2 subunit A; K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
101 vg:14005229 F366_gp37; Escherichia phage TL-2011c; Shiga toxin 2 subunit B; K11007 shiga toxin subunit B
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
102 vg:1262249 stx2A, VT2-Sap42; Enterobacteria phage VT2-Sakai; Shiga toxin 2 subunit A; K11006 shiga toxin subunit A
0a5e0df17054 Uploaded
chrisb
parents:
diff changeset
103 vg:1262250 stx2B, VT2-Sap43; Enterobacteria phage VT2-Sakai; Shiga toxin 2 subunit B; K11007 shiga toxin subunit B