diff get_data/kegg_glycan/test-data/shiga-toxin-example-OR-broken @ 1:0a5e0df17054 draft default tip

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author chrisb
date Fri, 06 May 2016 08:05:48 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/get_data/kegg_glycan/test-data/shiga-toxin-example-OR-broken	Fri May 06 08:05:48 2016 -0400
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+ece:Z1464	stx2A; shiga-like toxin II A subunit encoded by bacteriophage BP-933W; K11006 shiga toxin subunit A
+ece:Z1465	stx2B; shiga-like toxin II B subunit encoded by bacteriophage BP-933W; K11007 shiga toxin subunit B
+ece:Z3343	stx1B; shiga-like toxin 1 subunit B encoded within prophage CP-933V; K11007 shiga toxin subunit B
+ece:Z3344	stx1A; shiga-like toxin 1 subunit A encoded within prophage CP-933V; K11006 shiga toxin subunit A
+ecs:ECs1205	Shiga toxin 2 subunit A; K11006 shiga toxin subunit A
+ecs:ECs1206	Shiga toxin 2 subunit B; K11007 shiga toxin subunit B
+ecs:ECs2973	Shiga toxin I subunit B; K11007 shiga toxin subunit B
+ecs:ECs2974	Shiga toxin I subunit A; K11006 shiga toxin subunit A
+ecf:ECH74115_2905	shigatoxin 2, subunit B; K11007 shiga toxin subunit B
+ecf:ECH74115_2906	shiga toxin subunit A; K11006 shiga toxin subunit A
+ecf:ECH74115_3532	shiga toxin 2 B subunit; K11007 shiga toxin subunit B
+ecf:ECH74115_3533	shiga toxin subunit A; K11006 shiga toxin subunit A
+etw:ECSP_2722	stx2cB; Shiga-like toxin II subunit B precursor; K11007 shiga toxin subunit B
+etw:ECSP_2723	stx2A1; Shiga-like toxin II subunit A precursor; K11006 shiga toxin subunit A
+etw:ECSP_3252	stx2B; shiga toxin II subunit B; K11007 shiga toxin subunit B
+etw:ECSP_3253	stx2A2; shiga toxin II subunit A; K11006 shiga toxin subunit A
+elx:CDCO157_1154	Shiga toxin 2 subunit A; K11006 shiga toxin subunit A
+elx:CDCO157_1155	Shiga toxin 2 subunit B; K11007 shiga toxin subunit B
+elx:CDCO157_2738	Shiga toxin I subunit B precursor; K11007 shiga toxin subunit B
+elx:CDCO157_2739	Shiga toxin I subunit A precursor; K11006 shiga toxin subunit A
+eoj:ECO26_1599	Shiga toxin 1 subunit A; K11006 shiga toxin subunit A
+eoj:ECO26_1600	Shiga toxin 1 subunit B; K11007 shiga toxin subunit B
+eoi:ECO111_2429	Shiga toxin 2 subunit B; K11007 shiga toxin subunit B
+eoi:ECO111_2430	Shiga toxin 2 subunit A; K11006 shiga toxin subunit A
+eoi:ECO111_3361	Shiga toxin 1 subunit A; K11006 shiga toxin subunit A
+eoi:ECO111_3362	Shiga toxin 1 subunit B; K11007 shiga toxin subunit B
+eoh:ECO103_2844	Shiga toxin 2 subunit B; K11007 shiga toxin subunit B
+eoh:ECO103_2845	Shiga toxin 2 subunit A; K11006 shiga toxin subunit A
+eoh:ECO103_5197	Shiga toxin 1 subunit A; K11006 shiga toxin subunit A
+eoh:ECO103_5198	Shiga toxin 1 subunit B; K11007 shiga toxin subunit B
+eso:O3O_09170	Shiga toxin 2 subunit B; K11007 shiga toxin subunit B
+eso:O3O_09165	Shiga toxin 2 subunit A; K11006 shiga toxin subunit A
+esm:O3M_16105	Shiga toxin 2 subunit B; K11007 shiga toxin subunit B
+esm:O3M_16110	Shiga toxin 2 subunit A; K11006 shiga toxin subunit A
+esl:O3K_16130	Shiga toxin 2 subunit B; K11007 shiga toxin subunit B
+esl:O3K_16135	Shiga toxin 2 subunit A; K11006 shiga toxin subunit A
+ecoo:ECRM13514_3144	stx2B; Shiga-like toxin II subunit B precursor; K11007 shiga toxin subunit B
+ecoo:ECRM13514_3145	stx2A; Shiga-like toxin II subunit A precursor (EC:3.2.2.22); K11006 shiga toxin subunit A
+ecoh:ECRM13516_2315	stx2B; Shiga-like toxin II subunit B precursor; K11007 shiga toxin subunit B
+ecoh:ECRM13516_2316	stx2A; Shiga-like toxin II subunit A precursor (EC:3.2.2.22); K11006 shiga toxin subunit A
+stm:STM0284	shiga-like toxin A subunit
+seo:STM14_0332	putative Shiga-like toxin A subunit
+sev:STMMW_02891	putative shiga-like toxin A subunit
+sem:STMDT12_C02790	putative Shiga-like toxin A subunit
+sej:STMUK_0287	putative Shiga-like toxin A subunit
+setu:STU288_13325	putative shiga-like toxin A subunit
+setc:CFSAN001921_15985	Shiga toxin A subunit
+send:DT104_02831	sciR; shiga-like toxin a subunit, type VI secretion system SciR protein flags: precursor
+seni:CY43_01420	Shiga toxin A subunit
+seen:SE451236_07435	Shiga toxin A subunit
+spt:SPA2480	putative shiga-like toxin A subunit
+sek:SSPA2315	shiga-like toxin A subunit
+sei:SPC_0292	putative shiga-like toxin A subunit
+sec:SCH_0277	putative shiga-like toxin A subunit
+shb:SU5_0926	SciR Shiga-like toxin A subunit
+senh:CFSAN002069_07720	Shiga toxin A subunit
+seeh:SEEH1578_10515	putative shiga-like toxin A subunit
+seec:CFSAN002050_07960	Shiga toxin A subunit
+sene:IA1_01505	Shiga toxin A subunit
+senc:SEET0819_08350	Shiga toxin A subunit
+sdy:SDY_1389	stxA; Shiga toxin subunit A; K11006 shiga toxin subunit A
+sdy:SDY_1390	stxB; Shiga toxin subunit B; K11007 shiga toxin subunit B
+sdz:Asd1617_01826	Shiga toxin subunit A (EC:3.2.2.22); K11006 shiga toxin subunit A
+ebi:EbC_13780	Putative shiga-like toxin A subunit
+psos:POS17_2009	P9; putative Shiga-like toxin alpha subunit
+ssab:SSABA_v1c03870	hypothetical protein; K11006 shiga toxin subunit A
+ssab:SSABA_v1c09020	hypothetical protein; K11006 shiga toxin subunit A
+calt:Cal6303_2132	ribosome-inactivating protein; K11006 shiga toxin subunit A
+vg:22277199	PI30_gp34; Shigella phage POCJ13; shiga toxin A-chain precursor (EC:3.2.2.22); K11006 shiga toxin subunit A
+vg:22277200	PI30_gp35; Shigella phage POCJ13; shiga toxin I subunit B precursor; K11007 shiga toxin subunit B
+vg:1262301	APSE-1_07; Endosymbiont phage APSE-1; P7; K11007 shiga toxin subunit B
+vg:1481747	stx1A, Stx1_p142; Escherichia Stx1 converting phage; Shiga toxin1 subunit A; K11006 shiga toxin subunit A
+vg:1481748	stx1B, Stx1_p143; Escherichia Stx1 converting phage; Shiga toxin1 subunit B; K11007 shiga toxin subunit B
+vg:1481767	stx2A, Stx2II_p143; Stx2 converting phage II; Shiga toxin2 subunit A; K11006 shiga toxin subunit A
+vg:1481768	stx2B, Stx2II_p144; Stx2 converting phage II; Shiga toxin2 subunit B; K11007 shiga toxin subunit B
+vg:26228052	AS349_gp84; Escherichia phage PA2; shiga-like toxin II subunit A precursor (EC:3.2.2.22); K11006 shiga toxin subunit A
+vg:26228100	AS349_gp83; Escherichia phage PA2; shiga-like toxin II subunit B precursor; K11007 shiga toxin subunit B
+vg:26516496	stx2A, AU085_gp42; Enterobacteria phage VT2phi_272; Shiga toxin 2 A subunit; K11006 shiga toxin subunit A
+vg:26516448	stx2B, AU085_gp41; Enterobacteria phage VT2phi_272; Shiga toxin 2 B subunit; K11007 shiga toxin subunit B
+vg:26516283	stxB, phi191_00011, AU083_gp11; Escherichia phage phi191; shiga toxin subunit B precursor; K11007 shiga toxin subunit B
+vg:26516284	stxA, phi191_00012, AU083_gp12; Escherichia phage phi191; shiga toxin subunit A precursor (EC:3.2.2.22); K11006 shiga toxin subunit A
+vg:26519429	AU154_gp39; Shigella phage Ss-VASD; Stx1 A subunit; K11006 shiga toxin subunit A
+vg:26519430	AU154_gp40; Shigella phage Ss-VASD; Stx1 B subunit; K11007 shiga toxin subunit B
+vg:1261950	stxA2, L0103, sltIIA, stx2A, 933Wp40; Enterobacteria phage 933W; Shiga toxin 2 subunit A; K11006 shiga toxin subunit A
+vg:1262010	stxB2, L0104, sltIIB, stx2B, 933Wp41; Enterobacteria phage 933W; Shiga toxin 2 subunit B; K11007 shiga toxin subunit B
+vg:2641645	stxA1, phi4795p38, PBV4795_ORF40; Enterobacteria phage BP-4795; Shiga toxin 1 subunit A; K11006 shiga toxin subunit A
+vg:2641657	stxB1, phi4795p39, PBV4795_ORF41; Enterobacteria phage BP-4795; Shiga toxin 1 subunit B; K11007 shiga toxin subunit B
+vg:929695	stxA2e, P27p25; Enterobacteria phage phiP27; shiga toxin 2e A-subunit; K11006 shiga toxin subunit A
+vg:929727	stxB2e, P27p26; Enterobacteria phage phiP27; shiga toxin 2e B-subunit; K11007 shiga toxin subunit B
+vg:4397483	stx2A, Stx2-86_gp01; Stx2-converting phage 86; shiga toxin 2 subunit A; K11006 shiga toxin subunit A
+vg:4397484	stx2B, Stx2-86_gp02; Stx2-converting phage 86; shiga toxin 2 subunit B; K11007 shiga toxin subunit B
+vg:6159405	stx2A, pMIN27_41; Enterobacteria phage Min27; ORF44; K11006 shiga toxin subunit A
+vg:6159351	stx2B, pMIN27_42; Enterobacteria phage Min27; ORF45; K11007 shiga toxin subunit B
+vg:6973138	Stx2-1717_gp41; Stx2-converting phage 1717; verocytotoxin 2 variant 2c subunit A; K11006 shiga toxin subunit A
+vg:6972909	stx2cB, Stx2-1717_gp42; Stx2-converting phage 1717; verocytotoxin 2 variant 2c subunit B; K11007 shiga toxin subunit B
+vg:6973079	YYZ_gp39; Enterobacteria phage YYZ-2008; Shiga toxin 1 subunit A; K11006 shiga toxin subunit A
+vg:6973080	YYZ_gp40; Enterobacteria phage YYZ-2008; Shiga toxin 1 subunit B; K11007 shiga toxin subunit B
+vg:13828571	stx2A, D300_gp43; Escherichia phage P13374; shiga toxin 2 subunit A; K11006 shiga toxin subunit A
+vg:13828535	stx2B, D300_gp42; Escherichia phage P13374; shiga toxin 2 subunit B; K11007 shiga toxin subunit B
+vg:14005228	F366_gp36; Escherichia phage TL-2011c; Shiga toxin 2 subunit A; K11006 shiga toxin subunit A
+vg:14005229	F366_gp37; Escherichia phage TL-2011c; Shiga toxin 2 subunit B; K11007 shiga toxin subunit B
+vg:1262249	stx2A, VT2-Sap42; Enterobacteria phage VT2-Sakai; Shiga toxin 2 subunit A; K11006 shiga toxin subunit A
+vg:1262250	stx2B, VT2-Sap43; Enterobacteria phage VT2-Sakai; Shiga toxin 2 subunit B; K11007 shiga toxin subunit B