Mercurial > repos > chrisb > gap_all_glycan_tools
diff get_data/cfg/short-htmlfortesting.html @ 0:89592faa2875 draft
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| author | chrisb |
|---|---|
| date | Wed, 23 Mar 2016 14:35:56 -0400 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/get_data/cfg/short-htmlfortesting.html Wed Mar 23 14:35:56 2016 -0400 @@ -0,0 +1,901 @@ +<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd"> +<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en"> + <!-- +## Site Configuration +## @siteName FG +## @scope Site +## @adaption taken from ABA by JDG@NPG 2006 +--> + <!-- used in ${common}/includes/separator.fhtml --> + <!-- used in ${common}/includes/clearfloats.fhtml --> + <!-- used in ${common}/includes/global.backtotop.fhtml --> + <!-- SET THE BASE FOLDERS FOR THE SITE --> + <head> + <title> + Consortium for Functional Glycomics + </title> + <!-- metadata and links --> + <meta http-equiv="Content-Style-Type" content="text/css" /> + <meta http-equiv="Content-Type" content="text/html; charset=utf-8" /> + <link rel="home" href="/fg/index.shtml" title="home" /> + <!-- provide correct meta robots information - all pages except TOC pages (AOP, Issue, Focus (web and other), Supplements) use default "noarchive" type --> + <meta name="robots" content="noarchive" /> + <!-- end metadata and links --> + <meta name="keywords" content="" /> + <meta name="description" content="" /> + <style type="text/css" media="screen, projection"> + <!--/*--> + <![CDATA[/*><!--*/ + @import "/fg/style/layout.css"; + @import "/fg/style/site.css"; + @import "/fg/style/header_footer_smallfonts.css"; + @import "/fg/style/restrict_width/930px.css";/* do not edit this stylesheet */ +/*]]> + */--> + </style> + <!-- IE specific scripts - min/max fix --> + <!--[if lte IE 6]> + <script type="text/javascript" src="/fg/scripts/minmax.js"></script> +<![endif]--> + <!-- end IE specific scripts --> + <style type="text/css" media="screen, projection"> + <!--/*--> + <![CDATA[/*><!--*/ +@import "/glycomics/common/css/general.css"; +@import "/glycomics/common/css/jquery-ui-1.8.16.custom.css"; +@import "/glycomics/common/css/jquery.bubblepopup.v2.3.1.css"; +label.error { float: none; color: red; padding-left: .5em; vertical-align: middle; }; +/*]]> + */--> + </style> + <script type="text/javascript" language="javascript" src="/static/javascript/css_sidemenu.js"> + </script> + <script type="text/javascript" language="javascript" src="/static/javascript/openWindow.js"> + </script> + <script type="text/javascript" language="javascript" src="/glycomics/common/javascript/calendar/AnchorPosition.js"> + </script> + <script type="text/javascript" language="javascript" src="/glycomics/common/javascript/calendar/CalendarPopup.js"> + </script> + <script type="text/javascript" language="javascript" src="/glycomics/common/javascript/calendar/date.js"> + </script> + <script type="text/javascript" language="javascript" src="/glycomics/common/javascript/calendar/PopupWindow.js"> + </script> + <script type="text/javascript" language="javascript" src="/glycomics/common/javascript/popupWin.js"> + </script> + <script type="text/javascript" language="javascript" src="/glycomics/common/javascript/details3.js"> + </script> + <script type="text/javascript" src="/glycomics/common/jquery/jquery-1.6.4.min.js" language="javascript"> + </script> + <script type="text/javascript" src="/glycomics/common/jquery/jquery.validate.js" language="javascript"> + </script> + </head> + <body class="www-nature-com-fg" id="info"> + <!-- header --> + <div id="head-er"> + <div class="header-nonad-wrapper" id="top"> + <div class="accessibility-login-wrap"> + <div class="accessibility-login"> + <ul class="jumplinks"> + <li class="first"> + <a href="#content"> + Jump to main content + </a> + </li> + <li> + <a href="#main-journal-nav"> + Jump to navigation + </a> + </li> + </ul> + <span class="cleardiv"> + <!-- --> + </span> + </div> + </div> + <span class="cleardiv"> + <!-- --> + </span> + <hr /> + <div class="image-user-services-wrap"> + <div class="image-user-services"> + <a href="/fg"> + <img src="/fg/images/journal_header.gif" class="journal-header" alt="Functional Glycomics homepage" /> + </a> + <span class="cleardiv"> + <!-- --> + </span> + </div> + <span class="cleardiv"> + <!-- --> + </span> + </div> + <span class="cleardiv"> + <!-- --> + </span> + <hr /> + <div class="publications-search-wrap clearfix"> + <div class="publications-search"> + </div> + </div> + </div> + </div> + <!-- end header --> + <!-- opening divs for fixed width layout --> + <div id="constrain"> + <div class="constrain"> + <!-- OPEN DIV FOR CONTENT AND SITE NAVIGATION --> + <div id="content-journalnav"> + <!-- START JOURNALNAV DIV --> + <div id="journalnav"> + <!-- journalnav class must match class on naivgation list item to highlight that item --> + <h1 class="hidden"> + Site Navigation + </h1> + <map title="main journal navigation" id="main-journal-nav" class="journal-nav"> + <ul class="xoxo"> + <li> + <h1 class="hidden"> + Site Navigation + </h1> + <!-- menuCurrentPage is set to: glycanProfiling --> + <ul> + <li> + <a href="/static/index.shtml" title="Homepage"> + Home/Search + </a> + </li> + </ul> + </li> + <li> + <a href="/static/consortium/consortium.shtml" title="Consortium"> + Consortium for Functional Glycomics ( + <abbr title="Consortium for Functional Glycomics"> + CFG + </abbr> + ) + </a> + </li> + <li class="nav-net"> + <a href="http://www.functionalglycomics.org/CFGparadigms/index.php/Welcome_to_the_CFG_Paradigm_Pages" class="reg-rec" title="CFG Paradigms"> + CFG Paradigm Pages + </a> + </li> + <li> + <a href="/static/consortium/resources.shtml" title="Resources"> + <abbr title="CFG resources"> + CFG + </abbr> + Resources + </a> + </li> + <li class="selected"> + <a href="/glycomics/publicdata/home.jsp" title="Consortium Data"> + <abbr title="CFG data"> + CFG + </abbr> + Data + </a> + <ul class="subnav"> + <li> + <a href="/glycomics/publicdata/primaryscreen.jsp" title="Glycan Screen"> + Glycan Array + </a> + </li> + <li class="selected"> + <a href="/glycomics/publicdata/glycoprofiling-new.jsp" title="Glycan Profiling"> + Glycan Profiling + </a> + </li> + <li> + <a href="/glycomics/publicdata/microarray.jsp" title="Micro Array"> + Gene Microarray + </a> + </li> + <li> + <a href="/glycomics/publicdata/phenotyping.jsp" title="Phenotyping"> + Mouse Phenotyping + </a> + </li> + </ul> + </li> + <li> + <a href="/glycomics/common/jsp/firstpage.jsp" title="CFG Molecule Pages"> + <abbr title="CFG Molecule Pages"> + CFG + </abbr> + Molecule Pages + </a> + </li> + <li> + <a href="/static/consortium/Meetings.shtml" title="Meetings"> + Meetings + </a> + </li> + <li> + <a href="/static/consortium/Library.shtml" title="Library"> + CFG Library + </a> + </li> + <li class="spacing"> + <h2 class="toolbox"> + Toolbox + </h2> + </li> + <li> + <a href="http://www.openhelix.com/cfg" title="OpenHelix Tutorial" target="tutorial"> + Tutorial + </a> + </li> + <li> + <a href="/static/consortium/links.shtml" title="Glycomics Links"> + Glycomics Links + </a> + </li> + <li> + <a href="/fg/site_guide/about.shtml" title="About us"> + About us + </a> + </li> + <li> + <a href="/glycomics/common/jsp/suggestion/suggestion.jsp" title="suggestion"> + Suggestion + </a> + </li> + <li> + <a href="/static/consortium/map.shtml" title="Sitemap"> + Sitemap + </a> + </li> + <li> + <a href="/static/consortium/FAQs.shtml" title="FAQs"> + FAQs + </a> + </li> + </ul> + </map> + <!-- +<ul class="xoxo toolbox"> + <li><h2>Toolbox</h2> + <ul> + <li class="nav-rss"><a class="rss" href="/fg/#"><abbr title="Rich Site Summary">RSS</abbr></a></li + ><li class="nav-e-alert"><a href="/fg/ealert/signup.shtml">E-alerts</a></li + ></ul> + </li> +</ul> +--> + <!-- <p class="nav-new"><a class="whats-new" href="http://www.functionalglycomics.org/static/consortium/whatsnew.shtml" title="what is new on the Functional Glycomics Consortium page">What's new</a></p> --> + </div> + <!-- CLOSEs JOURNALNAV DIV --> + <!-- content --> + <div id="content"> + <div class="norm"> + <table align="center" class="origParamTable"> + <tr> + <td align="right"> + <a href="/glycomics/common/jsp/samples/searchSample.jsp?templateKey=2&12=CellType&operation=refine" onmouseout="MM_swapImgRestore();" onmouseover="MM_swapImage('main_r4_c6','','/glycomics/common/images/coreC/Cells_Highlight.jpg',1);"> + <img name="main_r4_c6" src="/glycomics/common/images/coreC/Cells_BW.jpg" width="200" height="75" border="0" id="main_r4_c6" alt="Cell Data" /> + </a> + </td> + <td align="left"> + <a href="/glycomics/common/jsp/samples/searchSample.jsp?templateKey=1&12=Tissue&operation=refine" onmouseout="MM_swapImgRestore();" onmouseover="MM_swapImage('human','','/glycomics/common/images/coreC/Tissues_Highlight.jpg',1)"> + <img name="human" src="/glycomics/common/images/coreC/Tissues_BW.jpg" width="200" height="75" border="0" id="human" alt="Tissue Data" /> + </a> + </td> + </tr> + </table> + <form id="searchResultsSample" name="searchResults" action="/glycomics/common/jsp/samples/searchSample.jsp"> + <table align="center" class="origParamTable"> + <tr> + <td colspan="3" align="left"> + species + </td> + <td colspan="4" align="left"> + <select name="5"> + <option value=""> + </option> + <option value="Chinese Hamster"> + Chinese Hamster + </option> + <option value="Human"> + Human + </option> + <option value="Mouse"> + Mouse + </option> + </select> + </td> + </tr> + <tr> + <td colspan="3" align="left"> + participating investigator + </td> + <td colspan="4" align="left"> + <select name="15"> + <option value=""> + </option> + <option value="Agbandje-McKenna, Mavis"> + Agbandje-McKenna, Mavis + </option> + <option value="Appelmelk, Ben J. "> + Appelmelk, Ben J. + </option> + <option value="Bennett, Eric"> + Bennett, Eric + </option> + <option value="Bochner, Bruce S."> + Bochner, Bruce S. + </option> + <option value="Cheng, Pi-Wan"> + Cheng, Pi-Wan + </option> + <option value="Contag, Christopher"> + Contag, Christopher + </option> + <option value="Cook-Mills, Joan"> + Cook-Mills, Joan + </option> + <option value="Crocker,Paul"> + Crocker,Paul + </option> + <option value="Cummings,Richard D. "> + Cummings,Richard D. + </option> + <option value="Dennis, James W."> + Dennis, James W. + </option> + <option value="Dimitroff, Charles"> + Dimitroff, Charles + </option> + <option value="Gordon, Siamon"> + Gordon, Siamon + </option> + <option value="Henion, Timothy"> + Henion, Timothy + </option> + <option value="Jackson, David "> + Jackson, David + </option> + <option value="Jaye, David"> + Jaye, David + </option> + <option value="Liu, FuTong"> + Liu, FuTong + </option> + <option value="Mahal, Lara K."> + Mahal, Lara K. + </option> + <option value="Merrill, Alfred"> + Merrill, Alfred + </option> + <option value="Metcalfe, Dean D."> + Metcalfe, Dean D. + </option> + <option value="Nitschke, Lars"> + Nitschke, Lars + </option> + <option value="Panjwani, Noorjahan"> + Panjwani, Noorjahan + </option> + <option value="Paulson, Henry"> + Paulson, Henry + </option> + <option value="Paulson, James"> + Paulson, James + </option> + <option value="Rittenhouse-Olson, Kate"> + Rittenhouse-Olson, Kate + </option> + <option value="Romagne, Francois"> + Romagne, Francois + </option> + <option value="Salomon,Daniel "> + Salomon,Daniel + </option> + <option value="Stanley, Pamela"> + Stanley, Pamela + </option> + <option value="Van Kooyk, Yvette"> + Van Kooyk, Yvette + </option> + <option value="Wild, Martin K."> + Wild, Martin K. + </option> + <option value="Wu, Hui"> + Wu, Hui + </option> + </select> + </td> + </tr> + <tr> + <td colspan="3" align="left"> + glycan type analyzed + </td> + <td colspan="4" align="left"> + <select name="10"> + <option value=""> + </option> + <option value="N-Linked"> + N-Linked + </option> + <option value="Non-Polar Glycolipids"> + Non-Polar Glycolipids + </option> + <option value="O-Linked"> + O-Linked + </option> + <option value="Polar Glycolipids"> + Polar Glycolipids + </option> + </select> + </td> + </tr> + <tr> + <td colspan="3" align="left"> + cell type + </td> + <td colspan="4" align="left"> + <select name="9"> + <option value=""> + </option> + <option value="A9 fibroblasts"> + A9 fibroblasts + </option> + <option value="Antibodies"> + Antibodies + </option> + <option value="B-Cells"> + B-Cells + </option> + <option value="B1 Cells"> + B1 Cells + </option> + <option value="Basophils"> + Basophils + </option> + <option value="Bone marrow mast cells (BMMC)"> + Bone marrow mast cells (BMMC) + </option> + <option value="CHO"> + CHO + </option> + <option value="CHO -Lec10.3C"> + CHO -Lec10.3C + </option> + <option value="CHO -Lec1.3C"> + CHO -Lec1.3C + </option> + <option value="CHO -Lec13.6A"> + CHO -Lec13.6A + </option> + <option value="CHO -Lec2.6A"> + CHO -Lec2.6A + </option> + <option value="CHO -Lec4.7B"> + CHO -Lec4.7B + </option> + <option value="CHO LEC11.E7"> + CHO LEC11.E7 + </option> + <option value="CHO LEC12.1B"> + CHO LEC12.1B + </option> + <option value="CHO LEC14.4A"> + CHO LEC14.4A + </option> + <option value="CHO LEC18.21B"> + CHO LEC18.21B + </option> + <option value="CHO LEC30.H2"> + CHO LEC30.H2 + </option> + <option value="Cytokine-induced killer (CIK) cells"> + Cytokine-induced killer (CIK) cells + </option> + <option value="Dendritic Cells"> + Dendritic Cells + </option> + <option value="EL4 T lymphocytes"> + EL4 T lymphocytes + </option> + <option value="Eosinophils "> + Eosinophils + </option> + <option value="Erythrocytes"> + Erythrocytes + </option> + <option value="HL-60"> + HL-60 + </option> + <option value="HeLa EV2"> + HeLa EV2 + </option> + <option value="HeLa PF"> + HeLa PF + </option> + <option value="Human Dermal Lymphatic Endothelial Cells (HDLEC) "> + Human Dermal Lymphatic Endothelial Cells (HDLEC) + </option> + <option value="Human Prostate LNCaP Cells "> + Human Prostate LNCaP Cells + </option> + <option value="Immunoglobulin (Plasma extract) "> + Immunoglobulin (Plasma extract) + </option> + <option value="K562"> + K562 + </option> + <option value="KG-1a"> + KG-1a + </option> + <option value="KG1a Cells"> + KG1a Cells + </option> + <option value="Macrophages"> + Macrophages + </option> + <option value="Mast Cells"> + Mast Cells + </option> + <option value="Monocytes"> + Monocytes + </option> + <option value="Murine mammary carcinoma"> + Murine mammary carcinoma + </option> + <option value="Natural Killer Cells"> + Natural Killer Cells + </option> + <option value="Natural killer cells"> + Natural killer cells + </option> + <option value="Neurons"> + Neurons + </option> + <option value="Neutrophils"> + Neutrophils + </option> + <option value="Osteoclasts"> + Osteoclasts + </option> + <option value="Peripheral Blood Mononuclear Cells (PBMC)"> + Peripheral Blood Mononuclear Cells (PBMC) + </option> + <option value="RAW"> + RAW + </option> + <option value="RAW 264.7 Cells"> + RAW 264.7 Cells + </option> + <option value="SV40 transformed fibroblast cell line, NB324K"> + SV40 transformed fibroblast cell line, NB324K + </option> + <option value="T-Cells"> + T-Cells + </option> + <option value="THP-1"> + THP-1 + </option> + <option value="VG37"> + VG37 + </option> + <option value="WEHI 231 B Cells"> + WEHI 231 B Cells + </option> + <option value="WEHI-3"> + WEHI-3 + </option> + </select> + </td> + </tr> + <tr> + <td colspan="7" align="center"> + <input type="hidden" name="operation" value="refine" /> + <input type="hidden" name="templateKey" value="2" /> + <input type="hidden" name="12" value="CellType" /> + <input type="submit" name="submit" value="submit" /> + <input type="submit" name="startOver" value="Start Over" /> + </td> + </tr> + </table> + </form> + <table> + <tr> + <td colspan="7"> + Glycan profiling data from analyses of cell samples are provided here. +Results can be filtered using the pull-down menus above. Several data file formats and an +interactive data viewer are provided; see key on previous page. + </td> + </tr> + </table> + <table width="80%" align="center" bgcolor="#DCDCDC" cellpadding="2" cellspacing="0"> + <tr> + <td class="webSiteBodyText" style="padding:4px;width ="> + </td> + </tr> + <tr> + <td> + <table align="center" width="100%" class="mainTablePresentation2" bordercolor="#D19275" border="1"> + <tr> + <td colspan="9" class="webSitePeopleH2" style="text-align:center;"> + Sample Search Results + </td> + </tr> + <tr class="gtTablePresentation"> + <td class="webSiteBodyText" style="padding:4px;" align="center"> + <strong> + Species + </strong> + </td> + <td class="webSiteBodyText" style="padding:4px;" align="center"> + <strong> + Comments + </strong> + </td> + <td class="webSiteBodyText" style="padding:4px;" align="center"> + <strong> + Cell Type + </strong> + </td> + <td class="webSiteBodyText" style="padding:4px;" align="center"> + <strong> + Glycan type Analyzed + </strong> + </td> + <td class="webSiteBodyText" style="padding:4px;" align="center"> + <strong> + Participating Investigator + </strong> + </td> + <td class="webSiteBodyText" style="padding:4px;" align="center" bgcolor="#DCDCDC"> + Meta Data + </td> + <td class="webSiteBodyText" style="padding:4px;" align="center" bgcolor="#DCDCDC"> + <table> + <tr> + <td colspan="2"> + <strong> + Image Files + </strong> + </td> + </tr> + <tr> + <td> + JPG + </td> + <td> + PDF + </td> + </tr> + </table> + </td> + <td class="webSiteBodyText" style="padding:4px;" align="center" bgcolor="#DCDCDC"> + <table> + <tr> + <td colspan="5"> + <strong> + Raw Data + </strong> + </td> + </tr> + <tr> + <td> + <strong> + MSD + </strong> + </td> + <td> + <strong> + MSA + </strong> + </td> + <td> + <strong> + DAT + </strong> + </td> + <td> + <strong> + MS-MS + </strong> + </td> + <td> + <strong> + Interactive View + </strong> + </td> + </tr> + </table> + </td> + <td class="webSiteBodyText" style="padding:4px;" align="center"> + <strong> + Resource Request + </strong> + </td> + </tr> + + + + + + + + <tr class="gtTablePresentation"> + + + + + + <td class="webSiteBodyText" style="padding:4px;" align="left"> + Mouse + </td> + <td class="webSiteBodyText" style="padding:4px;" align="left"> + EL4 T lymphocytes + </td> + <td class="webSiteBodyText" style="padding:4px;" align="left"> + EL4 T lymphocytes + </td> + <td class="webSiteBodyText" style="padding:4px;" align="left"> + Polar Glycolipids + </td> + <td class="webSiteBodyText" style="padding:4px;" align="left"> + Agbandje-McKenna, Mavis + </td> + <td class="glycoEnzymeTablePresentation"> + <a href="/glycomics/SampleServlet?operationType=view&key=3"> + <img src="/glycomics/common/images/metadata.jpg" alt="View experimental details" /> + </a> + + + + </td> + <td class="glycoEnzymeTablePresentation"> + <table> + <tr> + <td class="glycoEnzymeTablePresentation"> + <a href="/coreCStatic/allgiffiles/680.gif"> + <img src="/glycomics/common/images/coreC/JPG.jpg" alt="Annotated file in JPG format" /> + </a> + </td> + <td class="glycoEnzymeTablePresentation"> + <a href="/coreCStatic/allpdffiles/680.pdf"> + <img src="/glycomics/common/images/coreC/PDF.jpg" alt="Annotated file in PDF format" /> + </a> + </td> + </tr> + </table> + </td> + <td class="glycoEnzymeTablePresentation"> + <table> + <tr> + <td class="glycoEnzymeTablePresentation" width="50"> + <a href="/coreCStatic/allmsdfiles/10000205.msd"> + <img src="/glycomics/common/images/coreC/MSD.jpg" alt="View Mass Spectrum data as text" /> + </a> + </td> + <td class="glycoEnzymeTablePresentation" width="50"> + + </td> + <td class="glycoEnzymeTablePresentation" width="50"> + <a href="/glycomics/publicdata/viewGlycoProfilingSampleData.jsp?sampleKey=680" onmouseout="MM_swapImgRestore()" onmouseover="MM_swapImage('dat_button01','', '/coreCStatic/Library/images/dat_button_f2.gif', 1)"> + <img src="/coreCStatic/Library/images/dat_button.gif" alt="" name="dat_button<01 width=" /> + <01 width="40" height="40" border="0" id="dat_button" /> + </a> + </td> + <td class="glycoEnzymeTablePresentation" width="50"> + + </td> + <td class="glycoEnzymeTablePresentation" width="50"> + + </td> + </tr> + </table> + </td> + <td> + <a href="/glycomics/ResourceServlet?operation=viewById&resourceRequestId=cfg_rRequest_1185&View=View"> + cfg_rRequest_1185 + </a> + </td> + </tr> + + + + + + + + + </table> + </td> + </tr> + <tr> + <td class="webSiteBodyText" style="padding:4px;width ="> + </td> + </tr> + </table> + </div> + </div> + </div> + <!-- CLOSEs CONTENT-JOURNALNAV DIV --> + </div> + </div> + <p class="back-to-top hidden"> + <a href="#top"> + Top + <span class="hidden"> + of page + </span> + </a> + </p> + <div id="foot-er" class="footer"> + <div id="footer-journal"> + <div class="footer-constrain clearfix"> + <p class="journal-name"> + Functional Glycomics Gateway + </p> + <p class="eissn"> + <abbr title="International Standard Serial Number"> + ISSN + </abbr> + <span class="hidden"> + : + </span> + 1752-184X + </p> + <span class="cleardiv"> + <!-- --> + </span> + </div> + <span class="cleardiv"> + <!-- --> + </span> + </div> + <div id="footer-copyright"> + <div class="footer-constrain"> + <p> + © 2010 Functional Glycomics Gateway - All Rights Reserved | + <a href="/fg/privacy_terms.shtml"> + Privacy policy & Terms of Use + </a> + </p> + </div> + </div> + </div> + <!-- webtrends Version: 8.5.0 --> + <script src="/static/javascript/webtrends.js" type="text/javascript"> + </script> + <script type="text/javascript"> + <!--//--><![CDATA[/ /><!-- + var _tag=new WebTrends(); + _tag.dcsGetId(); +//--><!]]> + </script> + <script type="text/javascript"> + <!--//--><![CDATA[/ /><!-- + // Add custom parameters here. + // _tag.DCSext.param_name=param_value; + _tag.dcsCollect(); +//--><!]]> + </script> + <noscript> + <div> + <img alt="" id="DCSIMG" width="1" height="1" 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