Mercurial > repos > chrisb > gap_all_glycan_tools
view get_data/cfg/short-htmlfortesting.html @ 1:0a5e0df17054 draft default tip
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| author | chrisb |
|---|---|
| date | Fri, 06 May 2016 08:05:48 -0400 |
| parents | 89592faa2875 |
| children |
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<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd"> <html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en"> <!-- ## Site Configuration ## @siteName FG ## @scope Site ## @adaption taken from ABA by JDG@NPG 2006 --> <!-- used in ${common}/includes/separator.fhtml --> <!-- used in ${common}/includes/clearfloats.fhtml --> <!-- used in ${common}/includes/global.backtotop.fhtml --> <!-- SET THE BASE FOLDERS FOR THE SITE --> <head> <title> Consortium for Functional Glycomics </title> <!-- metadata and links --> <meta http-equiv="Content-Style-Type" content="text/css" /> <meta http-equiv="Content-Type" content="text/html; charset=utf-8" /> <link rel="home" href="/fg/index.shtml" title="home" /> <!-- provide correct meta robots information - all pages except TOC pages (AOP, Issue, Focus (web and other), Supplements) use default "noarchive" type --> <meta name="robots" content="noarchive" /> <!-- end metadata and links --> <meta name="keywords" content="" /> <meta name="description" content="" /> <style type="text/css" media="screen, projection"> <!--/*--> <![CDATA[/*><!--*/ @import "/fg/style/layout.css"; @import "/fg/style/site.css"; @import "/fg/style/header_footer_smallfonts.css"; @import "/fg/style/restrict_width/930px.css";/* do not edit this stylesheet */ /*]]> */--> </style> <!-- IE specific scripts - min/max fix --> <!--[if lte IE 6]> <script type="text/javascript" src="/fg/scripts/minmax.js"></script> <![endif]--> <!-- end IE specific scripts --> <style type="text/css" media="screen, projection"> <!--/*--> <![CDATA[/*><!--*/ @import "/glycomics/common/css/general.css"; @import "/glycomics/common/css/jquery-ui-1.8.16.custom.css"; @import "/glycomics/common/css/jquery.bubblepopup.v2.3.1.css"; label.error { float: none; color: red; padding-left: .5em; vertical-align: middle; }; /*]]> */--> </style> <script type="text/javascript" language="javascript" src="/static/javascript/css_sidemenu.js"> </script> <script type="text/javascript" language="javascript" src="/static/javascript/openWindow.js"> </script> <script type="text/javascript" language="javascript" src="/glycomics/common/javascript/calendar/AnchorPosition.js"> </script> <script type="text/javascript" language="javascript" src="/glycomics/common/javascript/calendar/CalendarPopup.js"> </script> <script type="text/javascript" language="javascript" src="/glycomics/common/javascript/calendar/date.js"> </script> <script type="text/javascript" language="javascript" src="/glycomics/common/javascript/calendar/PopupWindow.js"> </script> <script type="text/javascript" language="javascript" src="/glycomics/common/javascript/popupWin.js"> </script> <script type="text/javascript" language="javascript" src="/glycomics/common/javascript/details3.js"> </script> <script type="text/javascript" src="/glycomics/common/jquery/jquery-1.6.4.min.js" language="javascript"> </script> <script type="text/javascript" src="/glycomics/common/jquery/jquery.validate.js" language="javascript"> </script> </head> <body class="www-nature-com-fg" id="info"> <!-- header --> <div id="head-er"> <div class="header-nonad-wrapper" id="top"> <div class="accessibility-login-wrap"> <div class="accessibility-login"> <ul class="jumplinks"> <li class="first"> <a href="#content"> Jump to main content </a> </li> <li> <a href="#main-journal-nav"> Jump to navigation </a> </li> </ul> <span class="cleardiv"> <!-- --> </span> </div> </div> <span class="cleardiv"> <!-- --> </span> <hr /> <div class="image-user-services-wrap"> <div class="image-user-services"> <a href="/fg"> <img src="/fg/images/journal_header.gif" class="journal-header" alt="Functional Glycomics homepage" /> </a> <span class="cleardiv"> <!-- --> </span> </div> <span class="cleardiv"> <!-- --> </span> </div> <span class="cleardiv"> <!-- --> </span> <hr /> <div class="publications-search-wrap clearfix"> <div class="publications-search"> </div> </div> </div> </div> <!-- end header --> <!-- opening divs for fixed width layout --> <div id="constrain"> <div class="constrain"> <!-- OPEN DIV FOR CONTENT AND SITE NAVIGATION --> <div id="content-journalnav"> <!-- START JOURNALNAV DIV --> <div id="journalnav"> <!-- journalnav class must match class on naivgation list item to highlight that item --> <h1 class="hidden"> Site Navigation </h1> <map title="main journal navigation" id="main-journal-nav" class="journal-nav"> <ul class="xoxo"> <li> <h1 class="hidden"> Site Navigation </h1> <!-- menuCurrentPage is set to: glycanProfiling --> <ul> <li> <a href="/static/index.shtml" title="Homepage"> Home/Search </a> </li> </ul> </li> <li> <a href="/static/consortium/consortium.shtml" title="Consortium"> Consortium for Functional Glycomics ( <abbr title="Consortium for Functional Glycomics"> CFG </abbr> ) </a> </li> <li class="nav-net"> <a href="http://www.functionalglycomics.org/CFGparadigms/index.php/Welcome_to_the_CFG_Paradigm_Pages" class="reg-rec" title="CFG Paradigms"> CFG Paradigm Pages </a> </li> <li> <a href="/static/consortium/resources.shtml" title="Resources"> <abbr title="CFG resources"> CFG </abbr> Resources </a> </li> <li class="selected"> <a href="/glycomics/publicdata/home.jsp" title="Consortium Data"> <abbr title="CFG data"> CFG </abbr> Data </a> <ul class="subnav"> <li> <a href="/glycomics/publicdata/primaryscreen.jsp" title="Glycan Screen"> Glycan Array </a> </li> <li class="selected"> <a href="/glycomics/publicdata/glycoprofiling-new.jsp" title="Glycan Profiling"> Glycan Profiling </a> </li> <li> <a href="/glycomics/publicdata/microarray.jsp" title="Micro Array"> Gene Microarray </a> </li> <li> <a href="/glycomics/publicdata/phenotyping.jsp" title="Phenotyping"> Mouse Phenotyping </a> </li> </ul> </li> <li> <a href="/glycomics/common/jsp/firstpage.jsp" title="CFG Molecule Pages"> <abbr title="CFG Molecule Pages"> CFG </abbr> Molecule Pages </a> </li> <li> <a href="/static/consortium/Meetings.shtml" title="Meetings"> Meetings </a> </li> <li> <a href="/static/consortium/Library.shtml" title="Library"> CFG Library </a> </li> <li class="spacing"> <h2 class="toolbox"> Toolbox </h2> </li> <li> <a href="http://www.openhelix.com/cfg" title="OpenHelix Tutorial" target="tutorial"> Tutorial </a> </li> <li> <a href="/static/consortium/links.shtml" title="Glycomics Links"> Glycomics Links </a> </li> <li> <a href="/fg/site_guide/about.shtml" title="About us"> About us </a> </li> <li> <a href="/glycomics/common/jsp/suggestion/suggestion.jsp" title="suggestion"> Suggestion </a> </li> <li> <a href="/static/consortium/map.shtml" title="Sitemap"> Sitemap </a> </li> <li> <a href="/static/consortium/FAQs.shtml" title="FAQs"> FAQs </a> </li> </ul> </map> <!-- <ul class="xoxo toolbox"> <li><h2>Toolbox</h2> <ul> <li class="nav-rss"><a class="rss" href="/fg/#"><abbr title="Rich Site Summary">RSS</abbr></a></li ><li class="nav-e-alert"><a href="/fg/ealert/signup.shtml">E-alerts</a></li ></ul> </li> </ul> --> <!-- <p class="nav-new"><a class="whats-new" href="http://www.functionalglycomics.org/static/consortium/whatsnew.shtml" title="what is new on the Functional Glycomics Consortium page">What's new</a></p> --> </div> <!-- CLOSEs JOURNALNAV DIV --> <!-- content --> <div id="content"> <div class="norm"> <table align="center" class="origParamTable"> <tr> <td align="right"> <a href="/glycomics/common/jsp/samples/searchSample.jsp?templateKey=2&12=CellType&operation=refine" onmouseout="MM_swapImgRestore();" onmouseover="MM_swapImage('main_r4_c6','','/glycomics/common/images/coreC/Cells_Highlight.jpg',1);"> <img name="main_r4_c6" src="/glycomics/common/images/coreC/Cells_BW.jpg" width="200" height="75" border="0" id="main_r4_c6" alt="Cell Data" /> </a> </td> <td align="left"> <a href="/glycomics/common/jsp/samples/searchSample.jsp?templateKey=1&12=Tissue&operation=refine" onmouseout="MM_swapImgRestore();" onmouseover="MM_swapImage('human','','/glycomics/common/images/coreC/Tissues_Highlight.jpg',1)"> <img name="human" src="/glycomics/common/images/coreC/Tissues_BW.jpg" width="200" height="75" border="0" id="human" alt="Tissue Data" /> </a> </td> </tr> </table> <form id="searchResultsSample" name="searchResults" action="/glycomics/common/jsp/samples/searchSample.jsp"> <table align="center" class="origParamTable"> <tr> <td colspan="3" align="left"> species </td> <td colspan="4" align="left"> <select name="5"> <option value=""> </option> <option value="Chinese Hamster"> Chinese Hamster </option> <option value="Human"> Human </option> <option value="Mouse"> Mouse </option> </select> </td> </tr> <tr> <td colspan="3" align="left"> participating investigator </td> <td colspan="4" align="left"> <select name="15"> <option value=""> </option> <option value="Agbandje-McKenna, Mavis"> Agbandje-McKenna, Mavis </option> <option value="Appelmelk, Ben J. "> Appelmelk, Ben J. </option> <option value="Bennett, Eric"> Bennett, Eric </option> <option value="Bochner, Bruce S."> Bochner, Bruce S. </option> <option value="Cheng, Pi-Wan"> Cheng, Pi-Wan </option> <option value="Contag, Christopher"> Contag, Christopher </option> <option value="Cook-Mills, Joan"> Cook-Mills, Joan </option> <option value="Crocker,Paul"> Crocker,Paul </option> <option value="Cummings,Richard D. "> Cummings,Richard D. </option> <option value="Dennis, James W."> Dennis, James W. </option> <option value="Dimitroff, Charles"> Dimitroff, Charles </option> <option value="Gordon, Siamon"> Gordon, Siamon </option> <option value="Henion, Timothy"> Henion, Timothy </option> <option value="Jackson, David "> Jackson, David </option> <option value="Jaye, David"> Jaye, David </option> <option value="Liu, FuTong"> Liu, FuTong </option> <option value="Mahal, Lara K."> Mahal, Lara K. </option> <option value="Merrill, Alfred"> Merrill, Alfred </option> <option value="Metcalfe, Dean D."> Metcalfe, Dean D. </option> <option value="Nitschke, Lars"> Nitschke, Lars </option> <option value="Panjwani, Noorjahan"> Panjwani, Noorjahan </option> <option value="Paulson, Henry"> Paulson, Henry </option> <option value="Paulson, James"> Paulson, James </option> <option value="Rittenhouse-Olson, Kate"> Rittenhouse-Olson, Kate </option> <option value="Romagne, Francois"> Romagne, Francois </option> <option value="Salomon,Daniel "> Salomon,Daniel </option> <option value="Stanley, Pamela"> Stanley, Pamela </option> <option value="Van Kooyk, Yvette"> Van Kooyk, Yvette </option> <option value="Wild, Martin K."> Wild, Martin K. </option> <option value="Wu, Hui"> Wu, Hui </option> </select> </td> </tr> <tr> <td colspan="3" align="left"> glycan type analyzed </td> <td colspan="4" align="left"> <select name="10"> <option value=""> </option> <option value="N-Linked"> N-Linked </option> <option value="Non-Polar Glycolipids"> Non-Polar Glycolipids </option> <option value="O-Linked"> O-Linked </option> <option value="Polar Glycolipids"> Polar Glycolipids </option> </select> </td> </tr> <tr> <td colspan="3" align="left"> cell type </td> <td colspan="4" align="left"> <select name="9"> <option value=""> </option> <option value="A9 fibroblasts"> A9 fibroblasts </option> <option value="Antibodies"> Antibodies </option> <option value="B-Cells"> B-Cells </option> <option value="B1 Cells"> B1 Cells </option> <option value="Basophils"> Basophils </option> <option value="Bone marrow mast cells (BMMC)"> Bone marrow mast cells (BMMC) </option> <option value="CHO"> CHO </option> <option value="CHO -Lec10.3C"> CHO -Lec10.3C </option> <option value="CHO -Lec1.3C"> CHO -Lec1.3C </option> <option value="CHO -Lec13.6A"> CHO -Lec13.6A </option> <option value="CHO -Lec2.6A"> CHO -Lec2.6A </option> <option value="CHO -Lec4.7B"> CHO -Lec4.7B </option> <option value="CHO LEC11.E7"> CHO LEC11.E7 </option> <option value="CHO LEC12.1B"> CHO LEC12.1B </option> <option value="CHO LEC14.4A"> CHO LEC14.4A </option> <option value="CHO LEC18.21B"> CHO LEC18.21B </option> <option value="CHO LEC30.H2"> CHO LEC30.H2 </option> <option value="Cytokine-induced killer (CIK) cells"> Cytokine-induced killer (CIK) cells </option> <option value="Dendritic Cells"> Dendritic Cells </option> <option value="EL4 T lymphocytes"> EL4 T lymphocytes </option> <option value="Eosinophils "> Eosinophils </option> <option value="Erythrocytes"> Erythrocytes </option> <option value="HL-60"> HL-60 </option> <option value="HeLa EV2"> HeLa EV2 </option> <option value="HeLa PF"> HeLa PF </option> <option value="Human Dermal Lymphatic Endothelial Cells (HDLEC) "> Human Dermal Lymphatic Endothelial Cells (HDLEC) </option> <option value="Human Prostate LNCaP Cells "> Human Prostate LNCaP Cells </option> <option value="Immunoglobulin (Plasma extract) "> Immunoglobulin (Plasma extract) </option> <option value="K562"> K562 </option> <option value="KG-1a"> KG-1a </option> <option value="KG1a Cells"> KG1a Cells </option> <option value="Macrophages"> Macrophages </option> <option value="Mast Cells"> Mast Cells </option> <option value="Monocytes"> Monocytes </option> <option value="Murine mammary carcinoma"> Murine mammary carcinoma </option> <option value="Natural Killer Cells"> Natural Killer Cells </option> <option value="Natural killer cells"> Natural killer cells </option> <option value="Neurons"> Neurons </option> <option value="Neutrophils"> Neutrophils </option> <option value="Osteoclasts"> Osteoclasts </option> <option value="Peripheral Blood Mononuclear Cells (PBMC)"> Peripheral Blood Mononuclear Cells (PBMC) </option> <option value="RAW"> RAW </option> <option value="RAW 264.7 Cells"> RAW 264.7 Cells </option> <option value="SV40 transformed fibroblast cell line, NB324K"> SV40 transformed fibroblast cell line, NB324K </option> <option value="T-Cells"> T-Cells </option> <option value="THP-1"> THP-1 </option> <option value="VG37"> VG37 </option> <option value="WEHI 231 B Cells"> WEHI 231 B Cells </option> <option value="WEHI-3"> WEHI-3 </option> </select> </td> </tr> <tr> <td colspan="7" align="center"> <input type="hidden" name="operation" value="refine" /> <input type="hidden" name="templateKey" value="2" /> <input type="hidden" name="12" value="CellType" /> <input type="submit" name="submit" value="submit" /> <input type="submit" name="startOver" value="Start Over" /> </td> </tr> </table> </form> <table> <tr> <td colspan="7"> Glycan profiling data from analyses of cell samples are provided here. Results can be filtered using the pull-down menus above. Several data file formats and an interactive data viewer are provided; see key on previous page. </td> </tr> </table> <table width="80%" align="center" bgcolor="#DCDCDC" cellpadding="2" cellspacing="0"> <tr> <td class="webSiteBodyText" style="padding:4px;width ="> </td> </tr> <tr> <td> <table align="center" width="100%" class="mainTablePresentation2" bordercolor="#D19275" border="1"> <tr> <td colspan="9" class="webSitePeopleH2" style="text-align:center;"> Sample Search Results </td> </tr> <tr class="gtTablePresentation"> <td class="webSiteBodyText" style="padding:4px;" align="center"> <strong> Species </strong> </td> <td class="webSiteBodyText" style="padding:4px;" align="center"> <strong> Comments </strong> </td> <td class="webSiteBodyText" style="padding:4px;" align="center"> <strong> Cell Type </strong> </td> <td class="webSiteBodyText" style="padding:4px;" align="center"> <strong> Glycan type Analyzed </strong> </td> <td class="webSiteBodyText" style="padding:4px;" align="center"> <strong> Participating Investigator </strong> </td> <td class="webSiteBodyText" style="padding:4px;" align="center" bgcolor="#DCDCDC"> Meta Data </td> <td class="webSiteBodyText" style="padding:4px;" align="center" bgcolor="#DCDCDC"> <table> <tr> <td colspan="2"> <strong> Image Files </strong> </td> </tr> <tr> <td> JPG </td> <td> PDF </td> </tr> </table> </td> <td class="webSiteBodyText" style="padding:4px;" align="center" bgcolor="#DCDCDC"> <table> <tr> <td colspan="5"> <strong> Raw Data </strong> </td> </tr> <tr> <td> <strong> MSD </strong> </td> <td> <strong> MSA </strong> </td> <td> <strong> DAT </strong> </td> <td> <strong> MS-MS </strong> </td> <td> <strong> Interactive View </strong> </td> </tr> </table> </td> <td class="webSiteBodyText" style="padding:4px;" align="center"> <strong> Resource Request </strong> </td> </tr> <tr class="gtTablePresentation"> <td class="webSiteBodyText" style="padding:4px;" align="left"> Mouse </td> <td class="webSiteBodyText" style="padding:4px;" align="left"> EL4 T lymphocytes </td> <td class="webSiteBodyText" style="padding:4px;" align="left"> EL4 T lymphocytes </td> <td class="webSiteBodyText" style="padding:4px;" align="left"> Polar Glycolipids </td> <td class="webSiteBodyText" style="padding:4px;" align="left"> Agbandje-McKenna, Mavis </td> <td class="glycoEnzymeTablePresentation"> <a href="/glycomics/SampleServlet?operationType=view&key=3"> <img src="/glycomics/common/images/metadata.jpg" alt="View experimental details" /> </a> </td> <td class="glycoEnzymeTablePresentation"> <table> <tr> <td class="glycoEnzymeTablePresentation"> <a href="/coreCStatic/allgiffiles/680.gif"> <img src="/glycomics/common/images/coreC/JPG.jpg" alt="Annotated file in JPG format" /> </a> </td> <td class="glycoEnzymeTablePresentation"> <a href="/coreCStatic/allpdffiles/680.pdf"> <img src="/glycomics/common/images/coreC/PDF.jpg" alt="Annotated file in PDF format" /> </a> </td> </tr> </table> </td> <td class="glycoEnzymeTablePresentation"> <table> <tr> <td class="glycoEnzymeTablePresentation" width="50"> <a href="/coreCStatic/allmsdfiles/10000205.msd"> <img src="/glycomics/common/images/coreC/MSD.jpg" alt="View Mass Spectrum data as text" /> </a> </td> <td class="glycoEnzymeTablePresentation" width="50"> </td> <td class="glycoEnzymeTablePresentation" width="50"> <a href="/glycomics/publicdata/viewGlycoProfilingSampleData.jsp?sampleKey=680" onmouseout="MM_swapImgRestore()" onmouseover="MM_swapImage('dat_button01','', '/coreCStatic/Library/images/dat_button_f2.gif', 1)"> <img src="/coreCStatic/Library/images/dat_button.gif" alt="" name="dat_button<01 width=" /> <01 width="40" height="40" border="0" id="dat_button" /> </a> </td> <td class="glycoEnzymeTablePresentation" width="50"> </td> <td class="glycoEnzymeTablePresentation" width="50"> </td> </tr> </table> </td> <td> <a href="/glycomics/ResourceServlet?operation=viewById&resourceRequestId=cfg_rRequest_1185&View=View"> cfg_rRequest_1185 </a> </td> </tr> </table> </td> </tr> <tr> <td class="webSiteBodyText" style="padding:4px;width ="> </td> </tr> </table> </div> </div> </div> <!-- CLOSEs CONTENT-JOURNALNAV DIV --> </div> </div> <p class="back-to-top hidden"> <a href="#top"> Top <span class="hidden"> of page </span> </a> </p> <div id="foot-er" class="footer"> <div id="footer-journal"> <div class="footer-constrain clearfix"> <p class="journal-name"> Functional Glycomics Gateway </p> <p class="eissn"> <abbr title="International Standard Serial Number"> ISSN </abbr> <span class="hidden"> : </span> 1752-184X </p> <span class="cleardiv"> <!-- --> </span> </div> <span class="cleardiv"> <!-- --> </span> </div> <div id="footer-copyright"> <div class="footer-constrain"> <p> © 2010 Functional Glycomics Gateway - 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