Mercurial > repos > chrisb > gap_all_glycan_tools
view get_data/cfg_array/info/Primary Screen.html @ 0:89592faa2875 draft
Uploaded
| author | chrisb |
|---|---|
| date | Wed, 23 Mar 2016 14:35:56 -0400 |
| parents | |
| children |
line wrap: on
line source
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd"> <html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en"><!-- ## Site Configuration ## @siteName FG ## @scope Site ## @adaption taken from ABA by JDG@NPG 2006 --><!-- used in ${common}/includes/separator.fhtml --><!-- used in ${common}/includes/clearfloats.fhtml --><!-- used in ${common}/includes/global.backtotop.fhtml --><!-- SET THE BASE FOLDERS FOR THE SITE --><head> <title>Primary Screen</title> <!-- metadata and links --> <meta http-equiv="Content-Style-Type" content="text/css"> <meta http-equiv="Content-Type" content="text/html; charset=windows-1252"> <link rel="home" href="http://www.functionalglycomics.org/fg/index.shtml" title="home"> <!-- provide correct meta robots information - all pages except TOC pages (AOP, Issue, Focus (web and other), Supplements) use default "noarchive" type --> <meta name="robots" content="noarchive"> <!-- end metadata and links --> <meta name="keywords" content=""> <meta name="description" content=""> <style type="text/css" media="screen, projection"><!--/*--><![CDATA[/*><!--*/ @import "/fg/style/layout.css"; @import "/fg/style/site.css"; @import "/fg/style/header_footer_smallfonts.css"; @import "/fg/style/restrict_width/930px.css";/* do not edit this stylesheet */ /*]]>*/--></style> <!-- IE specific scripts - min/max fix --> <!--[if lte IE 6]> <script type="text/javascript" src="/fg/scripts/minmax.js"></script> <![endif]--> <!-- end IE specific scripts --> <style type="text/css" media="screen, projection"><!--/*--><![CDATA[/*><!--*/ @import "/glycomics/common/css/general.css"; @import "/glycomics/common/css/jquery-ui-1.8.16.custom.css"; @import "/glycomics/common/css/jquery.bubblepopup.v2.3.1.css"; label.error { float: none; color: red; padding-left: .5em; vertical-align: middle; }; /*]]>*/--></style> <script src="Primary%20Screen_files/ga.js" async="" type="text/javascript"></script><script type="text/javascript" language="javascript" src="Primary%20Screen_files/css_sidemenu.js"></script> <script type="text/javascript" language="javascript" src="Primary%20Screen_files/openWindow.js"></script> <script type="text/javascript" language="javascript" src="Primary%20Screen_files/AnchorPosition.js"></script> <script type="text/javascript" language="javascript" src="Primary%20Screen_files/CalendarPopup.js"></script> <script type="text/javascript" language="javascript" src="Primary%20Screen_files/date.js"></script> <script type="text/javascript" language="javascript" src="Primary%20Screen_files/PopupWindow.js"></script> <script type="text/javascript" language="javascript" src="Primary%20Screen_files/popupWin.js"></script> <script type="text/javascript" language="javascript" src="Primary%20Screen_files/details3.js"></script> <script type="text/javascript" src="Primary%20Screen_files/jquery-1.js" language="javascript"></script> <script type="text/javascript" src="Primary%20Screen_files/jquery.js" language="javascript"></script> </head> <body class="www-nature-com-fg" id="info"> <!-- header --> <div id="head-er"> <div class="header-nonad-wrapper" id="top"> <div class="accessibility-login-wrap"> <div class="accessibility-login"> <ul class="jumplinks"> <li class="first"><a href="#content">Jump to main content</a></li> <li><a href="#main-journal-nav">Jump to navigation</a></li> </ul> <span class="cleardiv"><!-- --></span> </div> </div> <span class="cleardiv"><!-- --></span> <hr> <div class="image-user-services-wrap"> <div class="image-user-services"> <a href="http://www.functionalglycomics.org/fg"><img src="Primary%20Screen_files/journal_header.gif" class="journal-header" alt="Functional Glycomics homepage"></a> <span class="cleardiv"><!-- --></span> </div> <span class="cleardiv"><!-- --></span> </div> <span class="cleardiv"><!-- --></span> <hr> <div class="publications-search-wrap clearfix"> <div class="publications-search"> </div> </div> </div> </div> <!-- end header --> <!-- opening divs for fixed width layout --> <div id="constrain"><div class="constrain"> <!-- OPEN DIV FOR CONTENT AND SITE NAVIGATION --> <div id="content-journalnav"> <!-- START JOURNALNAV DIV --> <div id="journalnav"><!-- journalnav class must match class on naivgation list item to highlight that item --> <h1 class="hidden">Site Navigation</h1> <map title="main journal navigation" id="main-journal-nav" class="journal-nav"> <ul class="xoxo"> <li><h1 class="hidden">Site Navigation</h1> <!-- menuCurrentPage is set to: glycanArray --> <ul> <li><a href="http://www.functionalglycomics.org/static/index.shtml" title="Homepage">Home/Search</a></li> </ul> </li> <li> <a href="http://www.functionalglycomics.org/static/consortium/consortium.shtml" title="Consortium">Consortium for Functional Glycomics (<abbr title="Consortium for Functional Glycomics">CFG</abbr>)</a> </li> <li class="nav-net"><a href="http://www.functionalglycomics.org/CFGparadigms/index.php/Welcome_to_the_CFG_Paradigm_Pages" class="reg-rec" title="CFG Paradigms">CFG Paradigm Pages</a></li> <li> <a href="http://www.functionalglycomics.org/static/consortium/resources.shtml" title="Resources"><abbr title="CFG resources">CFG</abbr> Resources</a> </li> <li class="selected"> <a href="http://www.functionalglycomics.org/glycomics/publicdata/home.jsp" title="Consortium Data"><abbr title="CFG data">CFG</abbr> Data</a> <ul class="subnav"> <li class="selected"><a href="http://www.functionalglycomics.org/glycomics/publicdata/primaryscreen.jsp" title="Glycan Screen">Glycan Array</a></li><li><a href="http://www.functionalglycomics.org/glycomics/publicdata/glycoprofiling-new.jsp" title="Glycan Profiling">Glycan Profiling</a></li><li><a href="http://www.functionalglycomics.org/glycomics/publicdata/microarray.jsp" title="Micro Array">Gene Microarray</a></li><li><a href="http://www.functionalglycomics.org/glycomics/publicdata/phenotyping.jsp" title="Phenotyping">Mouse Phenotyping</a></li></ul> </li> <li><a href="http://www.functionalglycomics.org/glycomics/common/jsp/firstpage.jsp" title="CFG Molecule Pages"><abbr title="CFG Molecule Pages">CFG</abbr> Molecule Pages</a> </li> <li><a href="http://www.functionalglycomics.org/static/consortium/Meetings.shtml" title="Meetings">Meetings</a> </li> <li> <a href="http://www.functionalglycomics.org/static/consortium/Library.shtml" title="Library">CFG Library</a> </li> <li class="spacing"><h2 class="toolbox">Toolbox</h2></li><li> <a href="http://www.openhelix.com/cfg" title="OpenHelix Tutorial" target="tutorial">Tutorial</a> </li><li><a href="http://www.functionalglycomics.org/static/consortium/links.shtml" title="Glycomics Links">Glycomics Links</a> </li><li><a href="http://www.functionalglycomics.org/fg/site_guide/about.shtml" title="About us">About us</a></li><li><a href="http://www.functionalglycomics.org/glycomics/common/jsp/suggestion/suggestion.jsp" title="suggestion">Suggestion</a></li><li><a href="http://www.functionalglycomics.org/static/consortium/map.shtml" title="Sitemap">Sitemap</a></li><li><a href="http://www.functionalglycomics.org/static/consortium/FAQs.shtml" title="FAQs">FAQs</a></li></ul></map> <!-- <ul class="xoxo toolbox"> <li><h2>Toolbox</h2> <ul> <li class="nav-rss"><a class="rss" href="/fg/#"><abbr title="Rich Site Summary">RSS</abbr></a></li ><li class="nav-e-alert"><a href="/fg/ealert/signup.shtml">E-alerts</a></li ></ul> </li> </ul> --> <!-- <p class="nav-new"><a class="whats-new" href="http://www.functionalglycomics.org/static/consortium/whatsnew.shtml" title="what is new on the Functional Glycomics Consortium page">What's new</a></p> --> </div><!-- CLOSEs JOURNALNAV DIV --> <!-- content --> <div id="content"> <script type="text/javascript"> function checkAll(v,top,mn,mx,a,b) { for(var i=mn;i<mx;i++) document.pspresentation.selectedSetsToDisplay[i].checked=eval(v); document.pspresentation.animalLectins.checked=false; return unCheckWrongOnes(top,a,b); } function unCheckWrongOnes(v,a,b) { var i,j; if (v < a) { for(i=a;i<b;i++) document.pspresentation.selectedSetsToDisplay[i].checked=false; } else if (v >= a){ for(j=0;j<a;j++) document.pspresentation.selectedSetsToDisplay[j].checked=false; } return true; } </script> <table border="0" width="100%"> <tbody><tr> <td class="norm" valign="top" width="80%"> <table> <tbody><tr> <td colspan="2" valign="top" width="100%"> <h2 align="center">Search glycan array data</h2> </td> </tr> <tr> <td colspan="2" class="webSiteBodyThin">This search interface offers access to all results obtained from screening samples for glycan binding specificity on the CFG mammalian glycan array, CFG pathogen glycan array, and CDC glycan array by the CFG Protein-Carbohydrate Interaction Core. Please select a sample type or glycan array version and click on Submit Selections. From the resulting list of samples, access raw data, bar charts showing which glycans bound to each sample with high affinity, and other information. The bar charts are a portal to further information about relevant glycans, including a 3-D modeling feature (GLYCAM). </td> </tr> <tr> <td> </td> </tr> <tr> <td> </td> </tr> <tr> <td class="webSiteBodyThin" colspan="4"> <ul> <li> <a href="javascript:openWindow('http://www.openhelix.com/cfg')">OpenHelix tutorial</a> for CFG Functional Glycomics Gateway </li> </ul> </td> </tr> </tbody></table> <form name="pspresentation" action="/glycomics/publicdata/selectedScreens.jsp" method="POST"> <table align="center"> <tbody><tr> <td><!-- left one --> <table align="center" border="0"> <tbody><tr> <td class="webSiteBodyGreenText" colspan="2">Search by Sample Type</td> </tr> <tr> <td colspan="2"> </td> </tr> <tr> <td colspan="2" class="webSiteBody"><input name="animalLectins" value="true" onclick="checkAll(this.value,1,0,4,8,15)" type="checkbox">Animal Glycan-binding proteins<br> </td> </tr> <tr> <td> </td> <td class="webSiteBody"><input name="selectedSetsToDisplay" value="cTypeLectins" onclick="unCheckWrongOnes(0,8,15)" type="checkbox">C-type lectins</td> </tr> <tr> <td> </td> <td class="webSiteBody"><input name="selectedSetsToDisplay" value="iTypeLectins" onclick="unCheckWrongOnes(1,8,15)" type="checkbox">Siglecs</td> </tr> <tr> <td> </td> <td class="webSiteBody"><input name="selectedSetsToDisplay" value="sTypeLectins" onclick="unCheckWrongOnes(2,8,15)" type="checkbox">Galectins</td> </tr> <tr> <td> </td> <td class="webSiteBody"><input name="selectedSetsToDisplay" value="otherAnimalLectins" onclick="unCheckWrongOnes(3,8,15)" type="checkbox">Other</td> </tr> <tr> <td colspan="2" class="webSiteBody"><input name="selectedSetsToDisplay" value="plantLectins" onclick="unCheckWrongOnes(4,8,15)" type="checkbox">Plant Lectins</td> </tr> <tr> <td colspan="2" class="webSiteBody"><input name="selectedSetsToDisplay" value="antiBodies" onclick="unCheckWrongOnes(5,8,15)" type="checkbox">Antibodies and Serum samples</td> </tr> <tr> <td colspan="2" class="webSiteBody"><input name="selectedSetsToDisplay" value="other" onclick="unCheckWrongOnes(6,8,15)" type="checkbox">Other (Pathogens [bacteria, viruses], Microbial lectins, etc)</td> </tr> <tr> <td colspan="2" class="webSiteBody"><input name="selectedSetsToDisplay" value="cellsOrganisms" onclick="unCheckWrongOnes(7,8,15)" type="checkbox">Cells, Organisms</td> </tr> </tbody></table> </td> <td> </td> <td> </td> <td> </td> <td><!-- right one --> <table align="center"> <tbody><tr> <td class="webSiteBodyGreenText" colspan="2">Or by Glycan Array type/version </td> </tr> <tr> <td class="webSiteBody"> </td> </tr> <tr> <td class="webSiteBody"> </td> </tr> <tr> <td class="webSiteBody"><input name="selectedSetsToDisplay" value="v1" onclick="unCheckWrongOnes(8,8,24)" type="checkbox"><a href="javascript:openWindow('http://www.functionalglycomics.org:80/static/coreH/arrayContents/GlycanArray_(EA)_v1x.xls')">Mammalian Plate Array Ver. 1</a></td> </tr> <tr> <td class="webSiteBody"><input name="selectedSetsToDisplay" value="v2" onclick="unCheckWrongOnes(9,8,24)" type="checkbox"><a href="javascript:openWindow('http://www.functionalglycomics.org:80/static/coreH/arrayContents/GlycanArray_(EA)_v2x.xls')">Mammalian Plate Array Ver. 2</a></td> </tr> <tr> <td class="webSiteBody"><input name="selectedSetsToDisplay" value="v3" onclick="unCheckWrongOnes(10,8,24)" type="checkbox"><a href="javascript:openWindow('http://www.functionalglycomics.org:80/static/coreH/arrayContents/GlycanArray_(EA)_v3x.xls')">Mammalian Plate Array Ver. 3</a></td> </tr> <tr> <td class="webSiteBody"><input name="selectedSetsToDisplay" value="pv1" onclick="unCheckWrongOnes(11,8,24)" type="checkbox"><a href="javascript:openWindow('http://www.functionalglycomics.org:80/static/coreH/arrayContents/Printed_Array_v1.xls')">Mammalian Printed Array Ver. 1</a></td> </tr> <tr> <td class="webSiteBody"><input name="selectedSetsToDisplay" value="pv2" onclick="unCheckWrongOnes(12,8,24)" type="checkbox"><a href="javascript:openWindow('http://www.functionalglycomics.org:80/static/coreH/arrayContents/Printed_Array_v2.xls')">Mammalian Printed Array Ver. 2</a></td> </tr> <tr> <td class="webSiteBody"><input name="selectedSetsToDisplay" value="pv21" onclick="unCheckWrongOnes(13,8,24)" type="checkbox"><a href="javascript:openWindow('http://www.functionalglycomics.org:80/glycomics/publicdata/arrayContents/Printed_Array_v2.1.xls')">Mammalian Printed Array Ver. 2.1</a></td> </tr> <tr> <td class="webSiteBody"><input name="selectedSetsToDisplay" value="pv3" onclick="unCheckWrongOnes(14,8,24)" type="checkbox"><a href="javascript:openWindow('http://www.functionalglycomics.org:80/static/consortium/resources/resourcecoreh10.shtml')">Mammalian Printed Array Ver. 3.0</a></td> </tr> <tr> <td class="webSiteBody"><input name="selectedSetsToDisplay" value="pv31" onclick="unCheckWrongOnes(15,8,24)" type="checkbox"><a href="javascript:openWindow('http://www.functionalglycomics.org:80/static/consortium/resources/resourcecoreh11.shtml')">Mammalian Printed Array Ver. 3.1</a></td> </tr> <tr> <td class="webSiteBody"><input name="selectedSetsToDisplay" value="pv32" onclick="unCheckWrongOnes(16,8,24)" type="checkbox"><a href="javascript:openWindow('http://www.functionalglycomics.org:80/static/consortium/resources/resourcecoreh12.shtml')">Mammalian Printed Array Ver. 3.2</a></td> </tr> <tr> <td class="webSiteBody"><input name="selectedSetsToDisplay" value="pv4" onclick="unCheckWrongOnes(17,8,24)" type="checkbox"><a href="javascript:openWindow('http://www.functionalglycomics.org:80/static/consortium/resources/resourcecoreh13.shtml')">Mammalian Printed Array Ver 4.0</a></td> </tr> <tr> <td class="webSiteBody"><input name="selectedSetsToDisplay" value="pv41" onclick="unCheckWrongOnes(18,8,24)" type="checkbox"><a href="javascript:openWindow('http://www.functionalglycomics.org:80/static/consortium/resources/resourcecoreh14.shtml')">Mammalian Printed Array Ver 4.1</a></td> </tr> <tr> <td class="webSiteBody"><input name="selectedSetsToDisplay" value="pv42" onclick="unCheckWrongOnes(19,8,24)" type="checkbox"><a href="javascript:openWindow('http://www.functionalglycomics.org:80/static/consortium/resources/resourcecoreh15.shtml')">Mammalian Printed Array Ver 4.2</a></td> </tr> <tr> <td class="webSiteBody"><input name="selectedSetsToDisplay" value="pv5" onclick="unCheckWrongOnes(20,8,24)" type="checkbox"><a href="javascript:openWindow('http://www.functionalglycomics.org:80/static/consortium/resources/resourcecoreh16.shtml')">Mammalian Printed Array Ver 5.0</a></td> </tr> <tr> <td class="webSiteBody"><input name="selectedSetsToDisplay" value="pv51" onclick="unCheckWrongOnes(21,8,24)" type="checkbox"><a href="javascript:openWindow('http://www.functionalglycomics.org:80/static/consortium/resources/resourcecoreh8.shtml')">Mammalian Printed Array Ver 5.1</a></td> </tr> <tr> <td class="webSiteBody"><input name="selectedSetsToDisplay" value="pv52" onclick="unCheckWrongOnes(22,8,24)" type="checkbox"><a href="javascript:openWindow('http://www.functionalglycomics.org:80/static/consortium/resources/resourcecoreh9.shtml')">Mammalian Printed Array Ver 5.2</a></td> </tr> <tr> <td class="webSiteBody"><input name="selectedSetsToDisplay" value="bactv1" onclick="unCheckWrongOnes(23,8,24)" type="checkbox"><a href="javascript:openWindow('http://www.functionalglycomics.org:80/static/consortium/resources/resourcecoreh8p.shtml')">Pathogen Array Ver 1.0</a></td> </tr> <tr><td class="webSiteBody"> </td> </tr> <tr> <td class="webSiteBody"> </td> </tr> <tr> <td class="webSiteBody"> </td> </tr> <tr> <td class="webSiteBody"> </td> </tr> <tr> <td class="webSiteBody"> </td> </tr> </tbody></table> <table align="center"> <tbody><tr> <td class="webSiteBodyGreenText" colspan="2"> <a href="http://www.functionalglycomics.org/glycomics/common/jsp/resource/existingFilesForRequest.jsp?requserlogin=rubendonis&resReqKey=1001109&rrid=cfg_rRequest_1336&projectDesc=To%20provide%20an%20interface%20%20to%20upload%20data%20collected%20on%20influenza%20virus%20receptor%20specficity%20with%20the%20custon%20CDC%20array&showDelete=true&showMakePublic=true"> Data from glycan arrays supplied to Centers for Disease Control</a> </td> </tr> <tr> <td class="webSiteBodyGreenText" colspan="2"> </td> </tr> </tbody></table> </td> </tr> <tr><td colspan="5" align="center"> <input name="dataNature" value="DataOnly" type="radio"> Data only <input name="dataNature" value="InconclusiveOnly" type="radio"> Inconclusive Only <input name="dataNature" value="All" type="radio">All </td></tr> <tr> <td class="webSiteBodyGreenText" colspan="5" align="center">* Submitting with no selections would display all the available results. You may also restrict the results displayed to <b>Data</b> only or <b>inconclusive</b> results only.</td> </tr> <tr> <td class="webSiteBody" colspan="5" align="center"><input value="Submit Selections" name="B3" type="submit"></td> </tr> </tbody></table> </form> <!--end inner table--></td> </tr> </tbody></table> </div> </div><!-- CLOSEs CONTENT-JOURNALNAV DIV --> </div></div> <p class="back-to-top hidden"><a href="#top">Top<span class="hidden"> of page</span></a></p> <div id="foot-er" class="footer"> <div id="footer-journal"> <div class="footer-constrain clearfix"> <p class="journal-name">Functional Glycomics Gateway</p> <p class="eissn"><abbr title="International Standard Serial Number">ISSN</abbr><span class="hidden">:</span> 1752-184X</p> <span class="cleardiv"><!-- --></span> </div> <span class="cleardiv"><!-- --></span> </div> <div id="footer-copyright"> <div class="footer-constrain"> <p>© 2010 Functional Glycomics Gateway - All Rights Reserved | <a href="http://www.functionalglycomics.org/fg/privacy_terms.shtml">Privacy policy & Terms of Use</a></p> </div> </div> </div> <!-- webtrends Version: 8.5.0 --> <script src="Primary%20Screen_files/webtrends.js" type="text/javascript"></script> <script type="text/javascript"> <!--//--><![CDATA[//><!-- var _tag=new WebTrends(); _tag.dcsGetId(); //--><!]]> </script> <script type="text/javascript"> <!--//--><![CDATA[//><!-- // Add custom parameters here. // _tag.DCSext.param_name=param_value; _tag.dcsCollect(); //--><!]]> </script> <noscript> <div><img alt="" id="DCSIMG" width="1" height="1" src="http://statse.webtrendslive.com/dcsc2bh0q10000cprjxnf6sz5_6h4b/njs.gif?dcsuri=/nojavascript&WT.js=No&WT.tv=8.5.0" /> </div> </noscript> <!-- Google Analytics --> <script type="text/javascript"> var _gaq = _gaq || []; _gaq.push(['_setAccount', 'UA-23107886-2']); _gaq.push(['_trackPageview']); (function() { var ga = document.createElement('script'); ga.type = 'text/javascript'; ga.async = true; ga.src = ('https:' == document.location.protocol ? 'https://ssl' : 'http://www') + '.google-analytics.com/ga.js'; var s = document.getElementsByTagName('script')[0]; s.parentNode.insertBefore(ga, s); })(); </script> <!-- ================ --> <!-- END OF CONTENT --> <!-- ================ --> </body></html>