Mercurial > repos > chrisd > coverage_sampler

annotate tool_dependencies.xml @ 1:fa1aae53a2f3 draft

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planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/gene_fraction commit b9f62f2ab10f5ff1c56edb895323820df36bdd0e-dirty
author chrisd
date Tue, 28 Jun 2016 23:31:46 -0400
parents 72901052a829
children ec439b0e7512
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72901052a829 planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/gene_fraction commit 3a1ac4b58e77fb6fba076c679ee7e317a79d1f8b
chrisd
parents:
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1 <?xml version="1.0"?>
72901052a829 planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/gene_fraction commit 3a1ac4b58e77fb6fba076c679ee7e317a79d1f8b
chrisd
parents:
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2 <tool_dependency>
72901052a829 planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/gene_fraction commit 3a1ac4b58e77fb6fba076c679ee7e317a79d1f8b
chrisd
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3 <package name="csa" version="0.1">
72901052a829 planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/gene_fraction commit 3a1ac4b58e77fb6fba076c679ee7e317a79d1f8b
chrisd
parents:
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4 <install version="1.0">
72901052a829 planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/gene_fraction commit 3a1ac4b58e77fb6fba076c679ee7e317a79d1f8b
chrisd
parents:
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5 <actions>
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fa1aae53a2f3 planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/gene_fraction commit b9f62f2ab10f5ff1c56edb895323820df36bdd0e-dirty
chrisd
parents: 0
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6 <action type="shell_command">git clone --recursive https://github.com/cdeanj/coverage_sampler.git</action>
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72901052a829 planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/gene_fraction commit 3a1ac4b58e77fb6fba076c679ee7e317a79d1f8b
chrisd
parents:
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7 <action type="shell_command">make</action>
72901052a829 planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/gene_fraction commit 3a1ac4b58e77fb6fba076c679ee7e317a79d1f8b
chrisd
parents:
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8 <action type="move_file">
72901052a829 planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/gene_fraction commit 3a1ac4b58e77fb6fba076c679ee7e317a79d1f8b
chrisd
parents:
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9 <source>csa</source>
72901052a829 planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/gene_fraction commit 3a1ac4b58e77fb6fba076c679ee7e317a79d1f8b
chrisd
parents:
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10 <destination>$INSTALL_DIR/bin</destination>
72901052a829 planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/gene_fraction commit 3a1ac4b58e77fb6fba076c679ee7e317a79d1f8b
chrisd
parents:
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11 </action>
72901052a829 planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/gene_fraction commit 3a1ac4b58e77fb6fba076c679ee7e317a79d1f8b
chrisd
parents:
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12 <action type="set_environment">
72901052a829 planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/gene_fraction commit 3a1ac4b58e77fb6fba076c679ee7e317a79d1f8b
chrisd
parents:
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13 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
72901052a829 planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/gene_fraction commit 3a1ac4b58e77fb6fba076c679ee7e317a79d1f8b
chrisd
parents:
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14 </action>
72901052a829 planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/gene_fraction commit 3a1ac4b58e77fb6fba076c679ee7e317a79d1f8b
chrisd
parents:
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15 </actions>
72901052a829 planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/gene_fraction commit 3a1ac4b58e77fb6fba076c679ee7e317a79d1f8b
chrisd
parents:
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16 </install>
72901052a829 planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/gene_fraction commit 3a1ac4b58e77fb6fba076c679ee7e317a79d1f8b
chrisd
parents:
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17 <readme>Compiling csa requires a C++ compiler</readme>
72901052a829 planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/gene_fraction commit 3a1ac4b58e77fb6fba076c679ee7e317a79d1f8b
chrisd
parents:
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18 </package>
72901052a829 planemo upload for repository https://github.com/cdeanj/galaxytools/tree/master/tools/gene_fraction commit 3a1ac4b58e77fb6fba076c679ee7e317a79d1f8b
chrisd
parents:
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19 </tool_dependency>