Mercurial > repos > cjav > split_by_barcode
diff ngs-tools_split_by_barcode.xml @ 2:ee8699b10e83 draft default tip
Updated to use ngs-tools 0.1.8 with better exception handling and proper writing of error messages to sdterr.
| author | cjav |
|---|---|
| date | Tue, 15 Oct 2013 13:08:50 -0400 |
| parents | 84df983ce1a8 |
| children |
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--- a/ngs-tools_split_by_barcode.xml Tue Sep 24 11:42:15 2013 -0400 +++ b/ngs-tools_split_by_barcode.xml Tue Oct 15 13:08:50 2013 -0400 @@ -1,7 +1,7 @@ <tool id="ngs-tools_split_by_barcode" name="Barcode Splitter (ngs-tools)" force_history_refresh="True" version="1.0.1"> <description></description> <requirements> - <requirement type="package" version="0.1.6">ngs-tools</requirement> + <requirement type="package" version="0.1.8">ngs-tools</requirement> </requirements> <command> ngs-tools split-by-barcode @@ -37,7 +37,7 @@ <param format="tabular" name="barcode_index" type="data" label="Barcodes index" help="See below for description." /> <param name="barcode_length" type="integer" size="3" value="11" label="Barcode length" help="Please specify the barcode length." /> <param name="barcodes" type="text" label="Barcodes to use" help="Comma separated list of barcodes to use. By default all barcodes in the 'Barcodes index' are used." /> - <param name="trim_barcode" type="select" label="Trim the barcode" help="By default barcodes are trimmed from the resulting splitted datasets"> + <param name="trim_barcode" type="select" label="Trim the barcode" help="By default barcodes are trimmed from the resulting split datasets"> <option value="" selected="true">Yes</option> <option value="--keep-barcode">No</option> </param> @@ -45,9 +45,9 @@ </inputs> <outputs> - <data format="interval" name="output1" /> + <data format="tabular" name="output1" /> </outputs> -<help> + <help> **What it does** @@ -80,5 +80,5 @@ .. __: https://github.com/cjav/ngs-tools/ -</help> + </help> </tool>