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annotate clustalomega/clustal-omega-0.2.0/src/hhalign/hhfunc.h @ 0:ff1768533a07

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Migrated tool version 0.2 from old tool shed archive to new tool shed repository
author clustalomega
date Tue, 07 Jun 2011 17:04:25 -0400
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ff1768533a07 Migrated tool version 0.2 from old tool shed archive to new tool shed repository
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1 /*********************************************************************
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2 * Clustal Omega - Multiple sequence alignment
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3 *
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4 * Copyright (C) 2010 University College Dublin
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5 *
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6 * Clustal-Omega is free software; you can redistribute it and/or
ff1768533a07 Migrated tool version 0.2 from old tool shed archive to new tool shed repository
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7 * modify it under the terms of the GNU General Public License as
ff1768533a07 Migrated tool version 0.2 from old tool shed archive to new tool shed repository
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8 * published by the Free Software Foundation; either version 2 of the
ff1768533a07 Migrated tool version 0.2 from old tool shed archive to new tool shed repository
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9 * License, or (at your option) any later version.
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10 *
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11 * This file is part of Clustal-Omega.
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12 *
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13 ********************************************************************/
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14
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15 /*
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16 * RCS $Id: hhfunc.h 143 2010-10-14 13:11:14Z andreas $
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17 */
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20 int readHMMWrapper(hmm_light *rHMM_p,
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21 char *pcHMM_input);
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22 void FreeHMMstruct(hmm_light *prHMM);
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23 int AlnToHMM2(hmm_light *rHMM_p,
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24 char **ppcSeq, int iN);
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25 int HHMake_Wrapper(char *tmp_aln, char *hmm_out);