Mercurial > repos > computational-metabolomics > dimspy_align_samples
comparison README.rst @ 0:33b65dacd377 draft
"planemo upload for repository https://github.com/computational-metabolomics/dimspy-galaxy commit 6321871098b2c4bc9e321d20b7e66fff3d641839"
author | computational-metabolomics |
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date | Sat, 11 Apr 2020 16:51:19 -0400 |
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children | c72868b80c29 |
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1 Galaxy tool wrappers for DIMSpy | |
2 ======================== | |
3 |Build Status (Travis)| |Git| |Bioconda| |License| | |
4 | |
5 Galaxy tool wrappers for Python package DIMSpy: data processing of direct-infusion mass spectrometry (DIMS)-based metabolomics and lipidomics data | |
6 | |
7 Source code: https://github.com/computational-metabolomics/dimspy | |
8 | |
9 PyPI (The Python Package Index): https://pypi.org/project/dimspy | |
10 | |
11 | |
12 Version | |
13 -------- | |
14 v1.4.0+Galaxy0 (`DIMSpy v1.4.0 <https://pypi.org/project/dimspy/1.4.0/>`_) | |
15 | |
16 | |
17 Galaxy | |
18 ------- | |
19 `Galaxy <https://galaxyproject.org>`_ is an open, web-based platform for data intensive biomedical research. Whether on the free public server or your own instance, you can perform, reproduce, and share complete analyses. | |
20 | |
21 | |
22 Authors, contributors & Contacts | |
23 ---------------------------------- | |
24 - Ralf J. M. Weber (r.j.weber@bham.ac.uk) - `University of Birmingham (UK) <http://www.birmingham.ac.uk/index.aspx>`_ | |
25 - Thomas N. Lawson (tnl495@bham.ac.uk) - `University of Birmingham (UK) <http://www.birmingham.ac.uk/index.aspx>`_ | |
26 - Martin R. Jones (m.r.jones.1@bham.ac.uk) - `University of Birmingham (UK) <http://www.birmingham.ac.uk/index.aspx>`_ | |
27 | |
28 | |
29 Bugs | |
30 ---- | |
31 Please report any bugs that you find `here <https://github.com/computational-metabolomics/dimspy-galaxy/issues>`_. | |
32 Or fork the repository on `GitHub <https://github.com/computational-metabolomics/dimspy-galaxy/>`_ | |
33 and create a pull request (PR). We welcome all contributions, and we | |
34 will help you to make the PR if you are new to `git`. | |
35 | |
36 | |
37 Changes | |
38 ------- | |
39 v1.4.0+galaxy0 | |
40 - First stable release | |
41 - Final release (Python 2-based version `DIMSpy <https://pypi.org/project/dimspy/1.4.0/>`_) | |
42 | |
43 | |
44 Licenses | |
45 ------- | |
46 DIMSpy and Galaxy tools are released under the GNU General Public License v3.0 (see `LICENSE file <https://github.com/computational-metabolomics/dimspy-galaxy/blob/master/LICENSE>`_) | |
47 | |
48 **Third-party licenses and copyright** | |
49 | |
50 RawFileReader reading tool. Copyright © 2016 by Thermo Fisher Scientific, Inc. All rights reserved. See `RawFileReaderLicense <https://github.com/computational-metabolomics/dimspy/blob/master/RawFileReaderLicense.rst>`_ for licensing information. | |
51 Using DIMSpy software for processing Thermo Fisher Scientific *.raw files implies the acceptance of the RawFileReader license terms. | |
52 Anyone receiving RawFileReader as part of a larger software distribution (in the current context, as part of DIMSpy) is considered an "end user" under | |
53 section 3.3 of the RawFileReader License, and is not granted rights to redistribute RawFileReader. | |
54 | |
55 | |
56 .. |Build Status (Travis)| image:: https://img.shields.io/travis/computational-metabolomics/dimspy-galaxy.svg?style=flat&maxAge=3600&label=Travis-CI | |
57 :target: https://travis-ci.com/computational-metabolomics/dimspy-galaxy | |
58 | |
59 .. |Git| image:: https://img.shields.io/badge/repository-GitHub-blue.svg?style=flat&maxAge=3600 | |
60 :target: https://github.com/computational-metabolomics/dimspy | |
61 | |
62 .. |Bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat&maxAge=3600 | |
63 :target: http://bioconda.github.io/recipes/dimspy/README.html | |
64 | |
65 .. |License| image:: https://img.shields.io/badge/License-GPL%20v3-blue.svg | |
66 :target: https://www.gnu.org/licenses/gpl-3.0.html |