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1 <?xml version="1.0"?>
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2 <tool id="edu.tamu.cpt.bprom" name="BPROM" version="1.0.0" profile="16.04">
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3 <description></description>
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4 <macros/>
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5 <requirements>
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6 <requirement type="package">libgcc</requirement>
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7 </requirements>
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8 <command detect_errors="aggressive">
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9 export TSS_DATA=$__tool_directory__/bprom_libFiles;
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10 $__tool_directory__/bprom $inFile $outFile
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11 </command>
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12 <inputs>
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13 <param label="Fasta Sequence" name="inFile" type="data" format="fasta" />
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14 </inputs>
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15 <outputs>
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16 <data format="txt" name="outFile" label="BPROM Results" />
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17 </outputs>
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18 <help>
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19 **What it does**
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20
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21 Runs BPROM analysis on a fasta file.
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22 </help>
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23 <tests/>
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24 <citations>
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25 <citation type="bibtex">
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26 @unpublished{galaxyTools,
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27 author = {V. Solovyev, A Salamov},
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28 title = {Automatic Annotation of Microbial Genomes and Metagenomic Sequences. In Metagenomics and its Applications in Agriculture, Biomedicine and Environmental Studies (Ed. R.W. Li), Nova Science Publishers, p. 61-78 },
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29 year = {2011},
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30
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31 }
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32 </citation>
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33 </citations>
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34 </tool>
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